RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 LMO4P61968 165 aa12.85□□□□□ -0.35
PCIF1-201ENST00000372409 LY6DQ14210 128 aa12.85□□□□□ -0.35
PCIF1-201ENST00000372409 DPF1Q92782 380 aa12.85□□□□□ -0.35
PCIF1-201ENST00000372409 CNFNQ9BYD5 112 aa12.85□□□□□ -0.35
PCIF1-201ENST00000372409 SPG11Q96JI7 2443 aa12.85□□□□□ -0.35
PCIF1-201ENST00000372409 TRAV8-2A0A0B4J237 113 aa12.84□□□□□ -0.35
PCIF1-201ENST00000372409 SMAD7O15105 426 aaKnown RBP12.84□□□□□ -0.35
PCIF1-201ENST00000372409 TRGV3P03979 118 aa12.84□□□□□ -0.35
PCIF1-201ENST00000372409 ATP5G2Q06055 141 aa12.84□□□□□ -0.35
PCIF1-201ENST00000372409 Q6ZQT7 251 aa12.84□□□□□ -0.35
PCIF1-201ENST00000372409 UFC1Q9Y3C8 167 aa12.84□□□□□ -0.35
PCIF1-201ENST00000372409 TRBV7-1A0A0A6YYK4 115 aa12.84□□□□□ -0.35
PCIF1-201ENST00000372409 TRAV8-6A0A0B4J262 113 aa12.84□□□□□ -0.35
PCIF1-201ENST00000372409 J3KRW8 73 aa12.84□□□□□ -0.35
PCIF1-201ENST00000372409 PRSS1P07477 247 aa12.84□□□□□ -0.35
PCIF1-201ENST00000372409 C21orf62-AS1Q17RA5 79 aa12.84□□□□□ -0.35
PCIF1-201ENST00000372409 PCP2Q8IVA1 136 aa12.84□□□□□ -0.35
PCIF1-201ENST00000372409 BOD1L2Q8IYS8 172 aa12.84□□□□□ -0.35
PCIF1-201ENST00000372409 A1L4Q6 167 aa12.83□□□□□ -0.35
PCIF1-201ENST00000372409 C5orf56Q8N8D9 126 aa12.83□□□□□ -0.35
PCIF1-201ENST00000372409 NXT2Q9NPJ8 142 aaKnown RBP12.83□□□□□ -0.35
PCIF1-201ENST00000372409 K7EP13 123 aa12.83□□□□□ -0.36
PCIF1-201ENST00000372409 C16orf92Q96LL3 132 aa12.83□□□□□ -0.36
PCIF1-201ENST00000372409 PSMG3-AS1Q96PY0 264 aa12.83□□□□□ -0.36
PCIF1-201ENST00000372409 PEF1Q9UBV8 284 aaKnown RBP12.83□□□□□ -0.36
PCIF1-201ENST00000372409 SEC11AP67812 179 aa12.82□□□□□ -0.36
PCIF1-201ENST00000372409 TRAV26-2A0A0B4J265 109 aa12.82□□□□□ -0.36
PCIF1-201ENST00000372409 FCER1GP30273 86 aa12.82□□□□□ -0.36
PCIF1-201ENST00000372409 SMIM15Q7Z3B0 74 aa12.82□□□□□ -0.36
PCIF1-201ENST00000372409 TMEM158Q8WZ71 300 aa12.82□□□□□ -0.36
PCIF1-201ENST00000372409 RNF151Q2KHN1 245 aa12.82□□□□□ -0.36
PCIF1-201ENST00000372409 SPANXN1Q5VSR9 72 aa12.81□□□□□ -0.36
PCIF1-201ENST00000372409 AP1S3Q96PC3 154 aa12.81□□□□□ -0.36
PCIF1-201ENST00000372409 TRAV41A0A0B4J266 112 aa12.81□□□□□ -0.36
PCIF1-201ENST00000372409 BRD3OSQ6XYD6 125 aa12.81□□□□□ -0.36
PCIF1-201ENST00000372409 RBX1P62877 108 aa12.8□□□□□ -0.36
PCIF1-201ENST00000372409 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
PCIF1-201ENST00000372409 OR2K2Q8NGT1 345 aa12.8□□□□□ -0.36
PCIF1-201ENST00000372409 NAA38Q9BRA0 125 aaKnown RBP12.8□□□□□ -0.36
PCIF1-201ENST00000372409 CUBNO60494 3623 aa12.8□□□□□ -0.36
PCIF1-201ENST00000372409 A6NDN8 102 aa12.8□□□□□ -0.36
PCIF1-201ENST00000372409 KLK9Q2XQG4 91 aa12.8□□□□□ -0.36
PCIF1-201ENST00000372409 FOXC2Q99958 501 aa12.8□□□□□ -0.36
PCIF1-201ENST00000372409 KLK9Q9UKQ9 250 aa12.8□□□□□ -0.36
PCIF1-201ENST00000372409 CENPEQ02224 2701 aa12.79□□□□□ -0.36
PCIF1-201ENST00000372409 PCP4P48539 62 aa12.79□□□□□ -0.36
PCIF1-201ENST00000372409 COL25A1Q9BXS0 654 aaPredicted RBP12.79□□□□□ -0.36
PCIF1-201ENST00000372409 MOB4Q9Y3A3 225 aa12.79□□□□□ -0.36
PCIF1-201ENST00000372409 SELENOKQ9Y6D0 94 aa12.79□□□□□ -0.36
PCIF1-201ENST00000372409 FLNCQ14315 2725 aa12.79□□□□□ -0.36
PCIF1-201ENST00000372409 IGHV7-4-1A0A0J9YVY3 117 aa12.79□□□□□ -0.36
PCIF1-201ENST00000372409 H3BVH4 76 aa12.79□□□□□ -0.36
PCIF1-201ENST00000372409 HSD52Q0P140 79 aa12.79□□□□□ -0.36
PCIF1-201ENST00000372409 ODF1Q14990 250 aa12.79□□□□□ -0.36
PCIF1-201ENST00000372409 TM4SF20Q53R12 229 aa12.79□□□□□ -0.36
PCIF1-201ENST00000372409 CFAP46Q8IYW2 2715 aa12.79□□□□□ -0.36
PCIF1-201ENST00000372409 C19orf84I3L1E1 186 aa12.78□□□□□ -0.36
PCIF1-201ENST00000372409 ARL3P36405 182 aa12.78□□□□□ -0.36
PCIF1-201ENST00000372409 C9orf47Q6ZRZ4 202 aa12.78□□□□□ -0.36
PCIF1-201ENST00000372409 Q8N8P6 123 aa12.78□□□□□ -0.36
PCIF1-201ENST00000372409 RAB37Q96AX2 223 aa12.78□□□□□ -0.36
PCIF1-201ENST00000372409 TTTY13Q9BZ97 58 aa12.78□□□□□ -0.36
PCIF1-201ENST00000372409 IGF1P05019 195 aa12.77□□□□□ -0.36
PCIF1-201ENST00000372409 MRPL53Q96EL3 112 aaKnown RBP12.77□□□□□ -0.36
PCIF1-201ENST00000372409 U3KQE9 123 aa12.77□□□□□ -0.36
PCIF1-201ENST00000372409 TRAV40A0A0B4J280 105 aa12.77□□□□□ -0.37
PCIF1-201ENST00000372409 LINC01546A6NGU7 62 aa12.77□□□□□ -0.37
PCIF1-201ENST00000372409 TRBV12-3P01733 135 aa12.77□□□□□ -0.37
PCIF1-201ENST00000372409 KIR3DS1Q14943 382 aa12.77□□□□□ -0.37
PCIF1-201ENST00000372409 PRR9Q5T870 116 aa12.77□□□□□ -0.37
PCIF1-201ENST00000372409 OR4X2Q8NGF9 303 aa12.77□□□□□ -0.37
PCIF1-201ENST00000372409 C20orf173Q96LM9 149 aa12.77□□□□□ -0.37
PCIF1-201ENST00000372409 CST9LQ9H4G1 147 aa12.77□□□□□ -0.37
PCIF1-201ENST00000372409 IGKV2D-26A0A0A0MRZ7 120 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 GAGE10A6NGK3 116 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 H3BUT2 72 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 SPRY2O43597 315 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 IGKCP01834 107 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 SMIM17P0DL12 118 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 RPL11P62913 178 aaKnown RBP12.76□□□□□ -0.37
PCIF1-201ENST00000372409 LY6EQ16553 131 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 UNQ9165/PRO28630Q6UXU0 137 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 ADAMTSL5Q6ZMM2 481 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 NPFFR1Q9GZQ6 430 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 HIF1ANQ9NWT6 349 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 DEFB1P60022 68 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 GTSCR1Q86UQ5 136 aa12.76□□□□□ -0.37
PCIF1-201ENST00000372409 IGKV3-7A0A075B6H7 116 aa12.75□□□□□ -0.37
PCIF1-201ENST00000372409 GAGE12BA1L429 117 aa12.75□□□□□ -0.37
PCIF1-201ENST00000372409 FAM223BA6NKX1 122 aa12.75□□□□□ -0.37
PCIF1-201ENST00000372409 SIVA1O15304 175 aa12.75□□□□□ -0.37
PCIF1-201ENST00000372409 FAM223AQ8IWN6 122 aa12.75□□□□□ -0.37
PCIF1-201ENST00000372409 GLMPQ8WWB7 406 aa12.75□□□□□ -0.37
PCIF1-201ENST00000372409 ITLN2Q8WWU7 325 aaPredicted RBP12.75□□□□□ -0.37
PCIF1-201ENST00000372409 TMEM160Q9NX00 188 aa12.75□□□□□ -0.37
PCIF1-201ENST00000372409 H3BRM9 83 aa12.75□□□□□ -0.37
PCIF1-201ENST00000372409 IGHV3-11P01762 117 aa12.75□□□□□ -0.37
PCIF1-201ENST00000372409 IGHV4-39P01824 125 aa12.75□□□□□ -0.37
PCIF1-201ENST00000372409 IGLV2-18A0A075B6J9 118 aa12.75□□□□□ -0.37
PCIF1-201ENST00000372409 TMEM8BA6NDV4 472 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms