RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 ZNF575Q86XF7 245 aa9.15□□□□□ -0.94
APP-201ENST00000346798 Q8N9W7 124 aa9.15□□□□□ -0.94
APP-201ENST00000346798 AGPAT4-IT1Q9H0P7 198 aa9.15□□□□□ -0.94
APP-201ENST00000346798 MSRB2Q9Y3D2 182 aa9.15□□□□□ -0.94
APP-201ENST00000346798 SORL1Q92673 2214 aa9.15□□□□□ -0.94
APP-201ENST00000346798 C9orf118A6NHY6 69 aa9.15□□□□□ -0.95
APP-201ENST00000346798 IGKV3D-20A0A0C4DH25 116 aa9.14□□□□□ -0.95
APP-201ENST00000346798 K7ENP7 123 aa9.14□□□□□ -0.95
APP-201ENST00000346798 FCER1GP30273 86 aa9.14□□□□□ -0.95
APP-201ENST00000346798 ZC2HC1BQ5TFG8 222 aa9.14□□□□□ -0.95
APP-201ENST00000346798 GTF2H5Q6ZYL4 71 aa9.14□□□□□ -0.95
APP-201ENST00000346798 OR1N2Q8NGR9 330 aa9.14□□□□□ -0.95
APP-201ENST00000346798 BUB3O43684 328 aa9.14□□□□□ -0.95
APP-201ENST00000346798 GOSR1O95249 250 aa9.14□□□□□ -0.95
APP-201ENST00000346798 SPANXN1Q5VSR9 72 aa9.14□□□□□ -0.95
APP-201ENST00000346798 OR2K2Q8NGT1 345 aa9.14□□□□□ -0.95
APP-201ENST00000346798 SPCS1Q9Y6A9 102 aa9.14□□□□□ -0.95
APP-201ENST00000346798 TRAV40A0A0B4J280 105 aa9.14□□□□□ -0.95
APP-201ENST00000346798 K7ERU9 68 aa9.14□□□□□ -0.95
APP-201ENST00000346798 FXYD2P54710 66 aa9.14□□□□□ -0.95
APP-201ENST00000346798 PAX8Q06710 450 aa9.14□□□□□ -0.95
APP-201ENST00000346798 TMEM78Q5T7P6 136 aa9.14□□□□□ -0.95
APP-201ENST00000346798 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.14□□□□□ -0.95
APP-201ENST00000346798 ADAMTSL5Q6ZMM2 481 aa9.14□□□□□ -0.95
APP-201ENST00000346798 HIF1ANQ9NWT6 349 aa9.14□□□□□ -0.95
APP-201ENST00000346798 H3BVH4 76 aa9.13□□□□□ -0.95
APP-201ENST00000346798 EFNA4P52798 201 aa9.13□□□□□ -0.95
APP-201ENST00000346798 VPS13CQ709C8 3753 aa9.13□□□□□ -0.95
APP-201ENST00000346798 TMEM8BA6NDV4 472 aa9.13□□□□□ -0.95
APP-201ENST00000346798 H3BRM9 83 aa9.13□□□□□ -0.95
APP-201ENST00000346798 IGF1P05019 195 aa9.13□□□□□ -0.95
APP-201ENST00000346798 RPL11P62913 178 aaKnown RBP9.13□□□□□ -0.95
APP-201ENST00000346798 ADORA2A-AS1P86434 159 aa9.13□□□□□ -0.95
APP-201ENST00000346798 ODF1Q14990 250 aa9.13□□□□□ -0.95
APP-201ENST00000346798 OR9G4Q8NGQ1 327 aa9.13□□□□□ -0.95
APP-201ENST00000346798 UBTD1Q9HAC8 227 aa9.13□□□□□ -0.95
APP-201ENST00000346798 SAA4P35542 130 aa9.12□□□□□ -0.95
APP-201ENST00000346798 ZNF502Q8TBZ5 544 aa9.12□□□□□ -0.95
APP-201ENST00000346798 A0A1W2PPR1 153 aa9.12□□□□□ -0.95
APP-201ENST00000346798 IGKCP01834 107 aa9.12□□□□□ -0.95
APP-201ENST00000346798 SMIM17P0DL12 118 aa9.12□□□□□ -0.95
APP-201ENST00000346798 COL25A1Q9BXS0 654 aaPredicted RBP9.12□□□□□ -0.95
APP-201ENST00000346798 NHP2Q9NX24 153 aaKnown RBP9.12□□□□□ -0.95
APP-201ENST00000346798 M0R381 172 aa9.12□□□□□ -0.95
APP-201ENST00000346798 SMIM15Q7Z3B0 74 aa9.12□□□□□ -0.95
APP-201ENST00000346798 OR4X2Q8NGF9 303 aa9.12□□□□□ -0.95
APP-201ENST00000346798 CCDC140Q96MF4 163 aa9.12□□□□□ -0.95
APP-201ENST00000346798 ZNF48Q96MX3 618 aaPredicted RBP9.12□□□□□ -0.95
APP-201ENST00000346798 RPL24P83731 157 aaKnown RBP9.11□□□□□ -0.95
APP-201ENST00000346798 Q8N6K4 173 aa9.11□□□□□ -0.95
APP-201ENST00000346798 C16orf92Q96LL3 132 aa9.11□□□□□ -0.95
APP-201ENST00000346798 ZFAND3Q9H8U3 227 aa9.11□□□□□ -0.95
APP-201ENST00000346798 NXT2Q9NPJ8 142 aaKnown RBP9.11□□□□□ -0.95
APP-201ENST00000346798 MRPL35Q9NZE8 188 aaKnown RBP9.11□□□□□ -0.95
APP-201ENST00000346798 PPBPP02775 128 aa9.11□□□□□ -0.95
APP-201ENST00000346798 GLMPQ8WWB7 406 aa9.11□□□□□ -0.95
APP-201ENST00000346798 C8orf86Q6ZUL3 223 aa9.11□□□□□ -0.95
APP-201ENST00000346798 METTL26Q96S19 204 aa9.11□□□□□ -0.95
APP-201ENST00000346798 CHAC1Q9BUX1 264 aa9.11□□□□□ -0.95
APP-201ENST00000346798 CLPSL1A2RUU4 121 aa9.1□□□□□ -0.95
APP-201ENST00000346798 K7EP34 96 aa9.1□□□□□ -0.95
APP-201ENST00000346798 HHLA3Q9XRX5 114 aa9.1□□□□□ -0.95
APP-201ENST00000346798 RAXQ9Y2V3 346 aa9.1□□□□□ -0.95
APP-201ENST00000346798 SMIM13P0DJ93 91 aa9.1□□□□□ -0.95
APP-201ENST00000346798 SAMD5Q5TGI4 173 aa9.1□□□□□ -0.95
APP-201ENST00000346798 MYOZ3Q8TDC0 251 aa9.1□□□□□ -0.95
APP-201ENST00000346798 DPF1Q92782 380 aa9.1□□□□□ -0.95
APP-201ENST00000346798 A0A1W2PPM0 123 aa9.1□□□□□ -0.95
APP-201ENST00000346798 FABP2P12104 132 aa9.1□□□□□ -0.95
APP-201ENST00000346798 LINC01559Q495D7 138 aa9.1□□□□□ -0.95
APP-201ENST00000346798 LCNL1Q6ZST4 164 aa9.1□□□□□ -0.95
APP-201ENST00000346798 FAM110DQ8TAY7 271 aaPredicted RBP9.1□□□□□ -0.95
APP-201ENST00000346798 TRBV25-1A0A075B6N4 114 aa9.09□□□□□ -0.95
APP-201ENST00000346798 TRAV8-2A0A0B4J237 113 aa9.09□□□□□ -0.95
APP-201ENST00000346798 DPM2O94777 84 aa9.09□□□□□ -0.95
APP-201ENST00000346798 MTURNQ8N3F0 131 aa9.09□□□□□ -0.95
APP-201ENST00000346798 IGHV3-11P01762 117 aa9.09□□□□□ -0.95
APP-201ENST00000346798 UFSP1Q6NVU6 142 aa9.09□□□□□ -0.95
APP-201ENST00000346798 BPESC1Q9GZL8 116 aa9.09□□□□□ -0.95
APP-201ENST00000346798 S100A4P26447 101 aaKnown RBP9.08□□□□□ -0.96
APP-201ENST00000346798 PRR9Q5T870 116 aa9.08□□□□□ -0.96
APP-201ENST00000346798 MINOS1Q5TGZ0 78 aa9.08□□□□□ -0.96
APP-201ENST00000346798 BRD3OSQ6XYD6 125 aa9.08□□□□□ -0.96
APP-201ENST00000346798 WFDC12Q8WWY7 111 aa9.08□□□□□ -0.96
APP-201ENST00000346798 MINOS1-NBL1R4GNA1 71 aa9.08□□□□□ -0.96
APP-201ENST00000346798 MGPP08493 103 aa9.08□□□□□ -0.96
APP-201ENST00000346798 C11orf71Q6IPW1 123 aa9.08□□□□□ -0.96
APP-201ENST00000346798 COX8CQ7Z4L0 72 aa9.08□□□□□ -0.96
APP-201ENST00000346798 MAPKAPK5-AS1Q8N8E1 139 aa9.08□□□□□ -0.96
APP-201ENST00000346798 Q8N8P6 123 aa9.08□□□□□ -0.96
APP-201ENST00000346798 SLC50A1Q9BRV3 221 aa9.08□□□□□ -0.96
APP-201ENST00000346798 SIRPDQ9H106 197 aa9.08□□□□□ -0.96
APP-201ENST00000346798 LAGE3Q14657 143 aa9.08□□□□□ -0.96
APP-201ENST00000346798 EEF1AKMT3Q96AZ1 226 aa9.08□□□□□ -0.96
APP-201ENST00000346798 F6UB75 175 aa9.07□□□□□ -0.96
APP-201ENST00000346798 TRBV12-3P01733 135 aa9.07□□□□□ -0.96
APP-201ENST00000346798 SRD5A1P18405 259 aa9.07□□□□□ -0.96
APP-201ENST00000346798 LY6EQ16553 131 aa9.07□□□□□ -0.96
APP-201ENST00000346798 C14orf178Q8N769 122 aaPredicted RBP9.07□□□□□ -0.96
APP-201ENST00000346798 TMEM190Q8WZ59 177 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms