RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 ZNF672Q499Z4 452 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-201ENST00000339754 KIR2DL4Q99706 377 aa7.28□□□□□ -1.24
NECAP1-201ENST00000339754 CACNA1GO43497 2377 aa7.28□□□□□ -1.24
NECAP1-201ENST00000339754 ZNF318Q5VUA4 2279 aa7.28□□□□□ -1.24
NECAP1-201ENST00000339754 IGHG4P01861 327 aa7.28□□□□□ -1.24
NECAP1-201ENST00000339754 CD7P09564 240 aa7.28□□□□□ -1.24
NECAP1-201ENST00000339754 TMEM78Q5T7P6 136 aa7.28□□□□□ -1.24
NECAP1-201ENST00000339754 TRBV7-9A0A0J9YWB2 115 aa7.27□□□□□ -1.25
NECAP1-201ENST00000339754 RHODO00212 210 aa7.27□□□□□ -1.25
NECAP1-201ENST00000339754 TCL1BO95988 128 aa7.27□□□□□ -1.25
NECAP1-201ENST00000339754 FABP5P3A8MUU1 101 aa7.27□□□□□ -1.25
NECAP1-201ENST00000339754 TRGV3P03979 118 aa7.27□□□□□ -1.25
NECAP1-201ENST00000339754 CCL8P80075 99 aa7.27□□□□□ -1.25
NECAP1-201ENST00000339754 PRSS33Q8NF86 280 aa7.27□□□□□ -1.25
NECAP1-201ENST00000339754 FDCSPQ8NFU4 85 aa7.27□□□□□ -1.25
NECAP1-201ENST00000339754 AJUBAQ96IF1 538 aa7.27□□□□□ -1.25
NECAP1-201ENST00000339754 FAM110AQ9BQ89 295 aa7.27□□□□□ -1.25
NECAP1-201ENST00000339754 TMEM262E9PQX1 116 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 TMEM95Q3KNT9 176 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 LYPD2Q6UXB3 125 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 PLEKHB2Q96CS7 222 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 FBXL15Q9H469 300 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 TRAV26-2A0A0B4J265 109 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 A8MWV9 139 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 HLA-DMBP28068 263 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 HERV-K104P63124 156 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 ANXA2RQ3ZCQ2 193 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 IGFL4Q6B9Z1 124 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 ANKRD29Q8N6D5 301 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 RAXQ9Y2V3 346 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 MALRD1Q5VYJ5 2156 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 PLCE1Q9P212 2302 aa7.26□□□□□ -1.25
NECAP1-201ENST00000339754 IGHV1-8P0DP01 117 aa7.25□□□□□ -1.25
NECAP1-201ENST00000339754 COX6B1P14854 86 aa7.25□□□□□ -1.25
NECAP1-201ENST00000339754 IL17RELQ6ZVW7 336 aa7.25□□□□□ -1.25
NECAP1-201ENST00000339754 NDUFA11Q86Y39 141 aa7.25□□□□□ -1.25
NECAP1-201ENST00000339754 NEXN-AS1Q8NBZ9 246 aa7.25□□□□□ -1.25
NECAP1-201ENST00000339754 PRADC1Q9BSG0 188 aa7.25□□□□□ -1.25
NECAP1-201ENST00000339754 SMAD5-AS1Q9Y6J3 95 aa7.25□□□□□ -1.25
NECAP1-201ENST00000339754 TRBV20-1A0A075B6N2 111 aa7.25□□□□□ -1.25
NECAP1-201ENST00000339754 LOXP28300 417 aaPredicted RBP7.25□□□□□ -1.25
NECAP1-201ENST00000339754 NDUFV3P56181 108 aaKnown RBP7.25□□□□□ -1.25
NECAP1-201ENST00000339754 ZNF474Q6S9Z5 364 aaPredicted RBP7.25□□□□□ -1.25
NECAP1-201ENST00000339754 SEM1Q6ZVN7 128 aa7.25□□□□□ -1.25
NECAP1-201ENST00000339754 SRSF8Q9BRL6 282 aaKnown RBP7.25□□□□□ -1.25
NECAP1-201ENST00000339754 S4R3C0 116 aa7.25□□□□□ -1.25
NECAP1-201ENST00000339754 IGKV3D-20A0A0C4DH25 116 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 ZNF815PA8K554 130 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 CCDC179H3BU77 68 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 DLX1P56177 255 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 SRSF9Q13242 221 aaKnown RBP eCLIP7.24□□□□□ -1.25
NECAP1-201ENST00000339754 DEFB109BQ30KR1 87 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 GFRALQ6UXV0 394 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 OR11H6Q8NGC7 330 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 SPENQ96T58 3664 aaKnown RBP7.24□□□□□ -1.25
NECAP1-201ENST00000339754 IGHV1-3A0A0C4DH29 117 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 GAGE12JA6NER3 117 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 NDUFB3O43676 98 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 GAGE7O76087 117 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 GAGE12FP0CL80 117 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 GAGE12GP0CL81 117 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 GAGE12IP0CL82 117 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 SLC25A16P16260 332 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 GAGE4Q13068 117 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 ERCC8Q13216 396 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 C3orf36Q3SXR2 165 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 TMEM155Q4W5P6 130 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 LYRM7Q5U5X0 104 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 C22orf34Q6ZV56 151 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 CFHR4Q92496 578 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 C11orf21Q9P2W6 132 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 ZNF292O60281 2723 aa7.24□□□□□ -1.25
NECAP1-201ENST00000339754 ZFHX2Q9C0A1 2572 aaPredicted RBP7.24□□□□□ -1.25
NECAP1-201ENST00000339754 TRAV4A0A0B4J268 109 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 H3BVH4 76 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 CRLF1O75462 422 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 RPL32P62910 135 aaKnown RBP7.23□□□□□ -1.25
NECAP1-201ENST00000339754 SCGB3A1Q96QR1 104 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 ZZEF1O43149 2961 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 LAMA5O15230 3695 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 KALRNO60229 2985 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 IGLV1-47P01700 117 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 CFC1BP0CG36 223 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 CFC1P0CG37 223 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 PRB3Q04118 309 aaPredicted RBP7.23□□□□□ -1.25
NECAP1-201ENST00000339754 GAGE2BQ13066 116 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 GAGE2EQ4V326 116 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 SCGB1D4Q6XE38 83 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 DYNAPQ8N1N2 210 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 KLHL30-AS1Q8NEE0 82 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 RASL10AQ92737 203 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 TOMM6Q96B49 74 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 VKORC1Q9BQB6 163 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 GAGE2DQ9UEU5 116 aa7.23□□□□□ -1.25
NECAP1-201ENST00000339754 CNOT1A5YKK6 2376 aaKnown RBP7.22□□□□□ -1.25
NECAP1-201ENST00000339754 PRAC2D3DTV9 90 aa7.22□□□□□ -1.25
NECAP1-201ENST00000339754 F8W735 103 aaPredicted RBP7.22□□□□□ -1.25
NECAP1-201ENST00000339754 TMEM178BH3BS89 294 aa7.22□□□□□ -1.25
NECAP1-201ENST00000339754 RPL7P18124 248 aaKnown RBP7.22□□□□□ -1.25
NECAP1-201ENST00000339754 SMIM20Q8N5G0 67 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms