RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 GLMPQ8WWB7 406 aa12.51□□□□□ -0.41
SCARB1-202ENST00000339570 RAB1BQ9H0U4 201 aa12.51□□□□□ -0.41
SCARB1-202ENST00000339570 TEX48A0A1B0GUV7 120 aa12.5□□□□□ -0.41
SCARB1-202ENST00000339570 FABP5P3A8MUU1 101 aa12.5□□□□□ -0.41
SCARB1-202ENST00000339570 M0R381 172 aa12.5□□□□□ -0.41
SCARB1-202ENST00000339570 FOXC1Q12948 553 aa12.5□□□□□ -0.41
SCARB1-202ENST00000339570 LYPD1Q8N2G4 141 aa12.5□□□□□ -0.41
SCARB1-202ENST00000339570 RNF185Q96GF1 192 aa12.5□□□□□ -0.41
SCARB1-202ENST00000339570 IGLV11-55A0A075B6I3 123 aa12.5□□□□□ -0.41
SCARB1-202ENST00000339570 IGKCP01834 107 aa12.5□□□□□ -0.41
SCARB1-202ENST00000339570 ARL6IP6Q8N6S5 226 aa12.5□□□□□ -0.41
SCARB1-202ENST00000339570 C11orf21Q9P2W6 132 aa12.5□□□□□ -0.41
SCARB1-202ENST00000339570 IGHG4P01861 327 aa12.5□□□□□ -0.41
SCARB1-202ENST00000339570 IGF1P05019 195 aa12.5□□□□□ -0.41
SCARB1-202ENST00000339570 HIVEP3Q5T1R4 2406 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 H3BVH4 76 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 CEACAM3P40198 252 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 EMP1P54849 157 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 VMO1Q7Z5L0 202 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 SMIM17P0DL12 118 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 PAX2Q02962 417 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 ODF1Q14990 250 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 TMEM219Q86XT9 240 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 TRBV25-1A0A075B6N4 114 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 LY6LH3BQJ8 138 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 UFSP1Q6NVU6 142 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 MAPKAPK5-AS1Q8N8E1 139 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 OR9G4Q8NGQ1 327 aa12.49□□□□□ -0.41
SCARB1-202ENST00000339570 COL25A1Q9BXS0 654 aaPredicted RBP12.49□□□□□ -0.41
SCARB1-202ENST00000339570 SMAGPQ0VAQ4 97 aa12.48□□□□□ -0.41
SCARB1-202ENST00000339570 ZNF562Q6V9R5 426 aa12.48□□□□□ -0.41
SCARB1-202ENST00000339570 SH2D6Q7Z4S9 175 aa12.48□□□□□ -0.41
SCARB1-202ENST00000339570 NEGR1Q7Z3B1 354 aa12.48□□□□□ -0.41
SCARB1-202ENST00000339570 OR4X2Q8NGF9 303 aa12.48□□□□□ -0.41
SCARB1-202ENST00000339570 HIST1H4GQ99525 98 aa12.48□□□□□ -0.41
SCARB1-202ENST00000339570 H3BMG7 143 aa12.47□□□□□ -0.41
SCARB1-202ENST00000339570 CRYBG3Q68DQ2 2970 aa12.47□□□□□ -0.41
SCARB1-202ENST00000339570 S100A7AQ86SG5 101 aa12.47□□□□□ -0.41
SCARB1-202ENST00000339570 TIMD4Q96H15 378 aa12.47□□□□□ -0.41
SCARB1-202ENST00000339570 TGFAP01135 160 aa12.47□□□□□ -0.41
SCARB1-202ENST00000339570 MGPP08493 103 aa12.47□□□□□ -0.41
SCARB1-202ENST00000339570 NPFFR1Q9GZQ6 430 aa12.47□□□□□ -0.41
SCARB1-202ENST00000339570 AGPAT4-IT1Q9H0P7 198 aa12.47□□□□□ -0.41
SCARB1-202ENST00000339570 CENPEQ02224 2701 aa12.46□□□□□ -0.41
SCARB1-202ENST00000339570 IGKV3D-20A0A0C4DH25 116 aa12.46□□□□□ -0.41
SCARB1-202ENST00000339570 PDE6HQ13956 83 aa12.46□□□□□ -0.41
SCARB1-202ENST00000339570 WFDC2Q14508 124 aa12.46□□□□□ -0.41
SCARB1-202ENST00000339570 U3KQK5 164 aa12.46□□□□□ -0.41
SCARB1-202ENST00000339570 TMEM238C9JI98 176 aa12.46□□□□□ -0.42
SCARB1-202ENST00000339570 SCGB2A2Q13296 93 aa12.46□□□□□ -0.42
SCARB1-202ENST00000339570 MYOZ3Q8TDC0 251 aa12.46□□□□□ -0.42
SCARB1-202ENST00000339570 IGLC6P0CF74 106 aa12.45□□□□□ -0.42
SCARB1-202ENST00000339570 ATP6V0E1O15342 81 aa12.45□□□□□ -0.42
SCARB1-202ENST00000339570 DPM2O94777 84 aa12.45□□□□□ -0.42
SCARB1-202ENST00000339570 SRD5A1P18405 259 aa12.45□□□□□ -0.42
SCARB1-202ENST00000339570 TMEM78Q5T7P6 136 aa12.45□□□□□ -0.42
SCARB1-202ENST00000339570 ZNF575Q86XF7 245 aa12.45□□□□□ -0.42
SCARB1-202ENST00000339570 HHLA3Q9XRX5 114 aa12.45□□□□□ -0.42
SCARB1-202ENST00000339570 CYSLTR1Q9Y271 337 aa12.45□□□□□ -0.42
SCARB1-202ENST00000339570 IGHV7-81A0A0B4J1V7 117 aa12.44□□□□□ -0.42
SCARB1-202ENST00000339570 G3V4G9 280 aa12.44□□□□□ -0.42
SCARB1-202ENST00000339570 ZFP36P26651 326 aaKnown RBP12.44□□□□□ -0.42
SCARB1-202ENST00000339570 ETDBQ3ZM63 59 aa12.44□□□□□ -0.42
SCARB1-202ENST00000339570 S100A4P26447 101 aaKnown RBP12.44□□□□□ -0.42
SCARB1-202ENST00000339570 TRBV6-1A0A0K0K1D8 114 aa12.43□□□□□ -0.42
SCARB1-202ENST00000339570 PAX8Q06710 450 aa12.43□□□□□ -0.42
SCARB1-202ENST00000339570 RPS20P60866 119 aaKnown RBP12.43□□□□□ -0.42
SCARB1-202ENST00000339570 C16orf92Q96LL3 132 aa12.43□□□□□ -0.42
SCARB1-202ENST00000339570 F6UB75 175 aa12.42□□□□□ -0.42
SCARB1-202ENST00000339570 IGHV3-11P01762 117 aa12.42□□□□□ -0.42
SCARB1-202ENST00000339570 C14orf178Q8N769 122 aaPredicted RBP12.42□□□□□ -0.42
SCARB1-202ENST00000339570 RPL39LQ96EH5 51 aaKnown RBP12.42□□□□□ -0.42
SCARB1-202ENST00000339570 NXT2Q9NPJ8 142 aaKnown RBP12.42□□□□□ -0.42
SCARB1-202ENST00000339570 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.42□□□□□ -0.42
SCARB1-202ENST00000339570 UBTD1Q9HAC8 227 aa12.42□□□□□ -0.42
SCARB1-202ENST00000339570 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.41□□□□□ -0.42
SCARB1-202ENST00000339570 ZNF479Q96JC4 524 aa12.41□□□□□ -0.42
SCARB1-202ENST00000339570 TSSC4Q9Y5U2 329 aaPredicted RBP12.41□□□□□ -0.42
SCARB1-202ENST00000339570 ZNF502Q8TBZ5 544 aa12.4□□□□□ -0.42
SCARB1-202ENST00000339570 VKORC1Q9BQB6 163 aa12.4□□□□□ -0.42
SCARB1-202ENST00000339570 GATD1Q8NB37 220 aa12.4□□□□□ -0.42
SCARB1-202ENST00000339570 NPBQ8NG41 125 aa12.4□□□□□ -0.42
SCARB1-202ENST00000339570 RNF5Q99942 180 aa12.4□□□□□ -0.42
SCARB1-202ENST00000339570 BUB3O43684 328 aa12.4□□□□□ -0.42
SCARB1-202ENST00000339570 PRTN3P24158 256 aa12.4□□□□□ -0.42
SCARB1-202ENST00000339570 LAGE3Q14657 143 aa12.4□□□□□ -0.42
SCARB1-202ENST00000339570 PRR9Q5T870 116 aa12.4□□□□□ -0.42
SCARB1-202ENST00000339570 TTC9CQ8N5M4 171 aa12.4□□□□□ -0.42
SCARB1-202ENST00000339570 USP9YO00507 2555 aaPredicted RBP12.4□□□□□ -0.42
SCARB1-202ENST00000339570 INSL3P51460 131 aa12.39□□□□□ -0.43
SCARB1-202ENST00000339570 CEND1Q8N111 149 aa12.39□□□□□ -0.43
SCARB1-202ENST00000339570 SCGB2A1O75556 95 aa12.39□□□□□ -0.43
SCARB1-202ENST00000339570 ARL3P36405 182 aa12.39□□□□□ -0.43
SCARB1-202ENST00000339570 C8orf86Q6ZUL3 223 aa12.39□□□□□ -0.43
SCARB1-202ENST00000339570 OR11H6Q8NGC7 330 aa12.39□□□□□ -0.43
SCARB1-202ENST00000339570 SCGB1D4Q6XE38 83 aa12.38□□□□□ -0.43
SCARB1-202ENST00000339570 Q8N9W7 124 aa12.38□□□□□ -0.43
SCARB1-202ENST00000339570 OR5A1Q8NGJ0 315 aa12.38□□□□□ -0.43
SCARB1-202ENST00000339570 SCGB3A1Q96QR1 104 aa12.38□□□□□ -0.43
SCARB1-202ENST00000339570 CSMD2Q7Z408 3487 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms