RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 SNURFLB1AK76 121 aa8.09□□□□□ -1.12
SLC28A1-202ENST00000338602 KLLNB2CW77 178 aa8.09□□□□□ -1.12
SLC28A1-202ENST00000338602 LY6G6CO95867 125 aa8.09□□□□□ -1.12
SLC28A1-202ENST00000338602 SULT1A2P50226 295 aa8.09□□□□□ -1.12
SLC28A1-202ENST00000338602 C5orf17Q8NAS9 161 aa8.09□□□□□ -1.12
SLC28A1-202ENST00000338602 FAM210BQ96KR6 192 aa8.09□□□□□ -1.12
SLC28A1-202ENST00000338602 UMAD1C9J7I0 102 aa8.08□□□□□ -1.12
SLC28A1-202ENST00000338602 PRM2P04554 102 aa8.08□□□□□ -1.12
SLC28A1-202ENST00000338602 DEFB130BP0DP73 79 aa8.08□□□□□ -1.12
SLC28A1-202ENST00000338602 DEFB130AP0DP74 79 aa8.08□□□□□ -1.12
SLC28A1-202ENST00000338602 HTN3P15516 51 aa8.08□□□□□ -1.12
SLC28A1-202ENST00000338602 BTN1A1Q13410 526 aa8.08□□□□□ -1.12
SLC28A1-202ENST00000338602 GOLT1AQ6ZVE7 132 aa8.08□□□□□ -1.12
SLC28A1-202ENST00000338602 EIF4E3Q8N5X7 224 aaKnown RBP8.08□□□□□ -1.12
SLC28A1-202ENST00000338602 SUN5Q8TC36 379 aa8.08□□□□□ -1.12
SLC28A1-202ENST00000338602 LINC00476Q8WZB0 136 aa8.08□□□□□ -1.12
SLC28A1-202ENST00000338602 NDFIP1Q9BT67 221 aa8.08□□□□□ -1.12
SLC28A1-202ENST00000338602 NDUFAF3Q9BU61 184 aa8.08□□□□□ -1.12
SLC28A1-202ENST00000338602 ALMS1Q8TCU4 4167 aa8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 PLECQ15149 4684 aaKnown RBP8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 IGHV4-4A0A075B6R2 117 aa8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 A0A1W2PRE2 83 aa8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 LINC00862A6NCI5 91 aa8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 FBLL1A6NHQ2 334 aaKnown RBP8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 CBY3A6NI87 242 aa8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 SUMO1P63165 101 aaKnown RBP8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 NDUFA5Q16718 116 aa8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 ZFAND2AQ8N6M9 145 aa8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 Q8TAT8 98 aa8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 RNASE8Q8TDE3 154 aaKnown RBP8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 LINC00467Q9BRT7 94 aa8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 NKX6-2Q9C056 277 aaPredicted RBP8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 NOP10Q9NPE3 64 aaKnown RBP8.07□□□□□ -1.12
SLC28A1-202ENST00000338602 MAP1LC3B2A6NCE7 125 aa8.06□□□□□ -1.12
SLC28A1-202ENST00000338602 TEX46H3BTG2 121 aa8.06□□□□□ -1.12
SLC28A1-202ENST00000338602 ZNF324O75467 553 aaPredicted RBP8.06□□□□□ -1.12
SLC28A1-202ENST00000338602 FHITP49789 147 aa8.06□□□□□ -1.12
SLC28A1-202ENST00000338602 LGALS9CQ6DKI2 356 aa8.06□□□□□ -1.12
SLC28A1-202ENST00000338602 MAP1LC3BQ9GZQ8 125 aa8.06□□□□□ -1.12
SLC28A1-202ENST00000338602 EPDR1Q9UM22 224 aa8.06□□□□□ -1.12
SLC28A1-202ENST00000338602 IGHV1OR15-1A0A075B7D0 117 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 PLAC8L1A1L4L8 177 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 TCRAP04437 139 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 ATP5G1P05496 136 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 ATP5G3P48201 142 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 PPT1P50897 306 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 RAB5CP51148 216 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 GNG5P63218 68 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 BLOC1S1P78537 153 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 ZNF726P1Q15940 193 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 ANXA2RQ3ZCQ2 193 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 DPPA3Q6W0C5 159 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 FAM213BQ8TBF2 198 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 TREM1Q9NP99 234 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 APLNQ9ULZ1 77 aa8.05□□□□□ -1.12
SLC28A1-202ENST00000338602 F6UZH7 168 aa8.04□□□□□ -1.12
SLC28A1-202ENST00000338602 FGF8P55075 233 aaPredicted RBP8.04□□□□□ -1.12
SLC28A1-202ENST00000338602 DAZ2Q13117 558 aaKnown RBP8.04□□□□□ -1.12
SLC28A1-202ENST00000338602 IBA57Q5T440 356 aaKnown RBP8.04□□□□□ -1.12
SLC28A1-202ENST00000338602 FAM159AQ6UWV7 190 aa8.04□□□□□ -1.12
SLC28A1-202ENST00000338602 SSX7Q7RTT5 188 aa8.04□□□□□ -1.12
SLC28A1-202ENST00000338602 CYB561D1Q8N8Q1 229 aa8.04□□□□□ -1.12
SLC28A1-202ENST00000338602 ATG101Q9BSB4 218 aa8.04□□□□□ -1.12
SLC28A1-202ENST00000338602 TRAV21A0A0B4J279 112 aa8.03□□□□□ -1.12
SLC28A1-202ENST00000338602 GGTLC3B5MD39 225 aa8.03□□□□□ -1.12
SLC28A1-202ENST00000338602 F5H768 121 aa8.03□□□□□ -1.12
SLC28A1-202ENST00000338602 UBE2G2P60604 165 aa8.03□□□□□ -1.12
SLC28A1-202ENST00000338602 PRR9Q5T870 116 aa8.03□□□□□ -1.12
SLC28A1-202ENST00000338602 Q6AWC8 147 aa8.03□□□□□ -1.12
SLC28A1-202ENST00000338602 COMMD7Q86VX2 200 aa8.03□□□□□ -1.12
SLC28A1-202ENST00000338602 SFT2D1Q8WV19 159 aa8.03□□□□□ -1.12
SLC28A1-202ENST00000338602 TMPRSS5Q9H3S3 457 aa8.03□□□□□ -1.12
SLC28A1-202ENST00000338602 GSN-AS1Q9NRJ2 163 aa8.03□□□□□ -1.12
SLC28A1-202ENST00000338602 PSG8Q9UQ74 426 aa8.03□□□□□ -1.12
SLC28A1-202ENST00000338602 TRGV11A0A075B6L2 103 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 TRAV8-1A0A0A6YYK1 113 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 GAGE12BA1L429 117 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 ATP6V1G1O75348 118 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 GAGE7O76087 117 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 GAGE12FP0CL80 117 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 GAGE12GP0CL81 117 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 GAGE12IP0CL82 117 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 P0DMU3 169 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 FAM231AP0DMU4 169 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 FAM231CP0DMU5 169 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 FLI1Q01543 452 aaPredicted RBP8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 ZNF415Q09FC8 603 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 SAPCD1Q5SSQ6 148 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 TMEM75Q8N9X5 138 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 C15orf53Q8NAA6 179 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 HIST1H2BAQ96A08 127 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 TCEAL7Q9BRU2 100 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 MED9Q9NWA0 146 aa8.02□□□□□ -1.13
SLC28A1-202ENST00000338602 TRGV2A0A075B6R0 118 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 A0A1B0GV50 99 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 FAM74A7A6NL05 159 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 PEX7O00628 323 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 H2AFB1P0C5Y9 115 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 TCL1AP56279 114 aa8.01□□□□□ -1.13
SLC28A1-202ENST00000338602 MUC21Q5SSG8 566 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms