RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 NCKAP5O14513 1909 aa13.03□□□□□ -0.32
CLIP4-201ENST00000320081 MRPL51Q4U2R6 128 aaKnown RBP13.02□□□□□ -0.32
CLIP4-201ENST00000320081 ZNF625Q96I27 306 aaPredicted RBP13.02□□□□□ -0.32
CLIP4-201ENST00000320081 ZNF479Q96JC4 524 aa13.02□□□□□ -0.32
CLIP4-201ENST00000320081 B4DSR2 109 aa13.02□□□□□ -0.33
CLIP4-201ENST00000320081 IGHV4-39P01824 125 aa13.02□□□□□ -0.33
CLIP4-201ENST00000320081 SPEGQ15772 3267 aa13.02□□□□□ -0.33
CLIP4-201ENST00000320081 IGHV3-16A0A0C4DH30 117 aa13.02□□□□□ -0.33
CLIP4-201ENST00000320081 K7EMI3 77 aa13.02□□□□□ -0.33
CLIP4-201ENST00000320081 POU2AF1Q16633 256 aa13.02□□□□□ -0.33
CLIP4-201ENST00000320081 CD28P10747 220 aa13.01□□□□□ -0.33
CLIP4-201ENST00000320081 C8orf86Q6ZUL3 223 aa13.01□□□□□ -0.33
CLIP4-201ENST00000320081 Q71RC1 249 aaPredicted RBP13.01□□□□□ -0.33
CLIP4-201ENST00000320081 FAM104BQ5XKR9 115 aa13.01□□□□□ -0.33
CLIP4-201ENST00000320081 DEFB131AP59861 70 aa13□□□□□ -0.33
CLIP4-201ENST00000320081 KIR3DS1Q14943 382 aa13□□□□□ -0.33
CLIP4-201ENST00000320081 STHQ8IWL8 128 aa13□□□□□ -0.33
CLIP4-201ENST00000320081 C11orf68Q9H3H3 251 aaKnown RBP13□□□□□ -0.33
CLIP4-201ENST00000320081 C11orf1Q9H5F2 150 aa13□□□□□ -0.33
CLIP4-201ENST00000320081 SMIM27A0A1W2PRY6 76 aa13□□□□□ -0.33
CLIP4-201ENST00000320081 PRB1P04280 392 aa13□□□□□ -0.33
CLIP4-201ENST00000320081 FOXE3Q13461 319 aa13□□□□□ -0.33
CLIP4-201ENST00000320081 SAMD5Q5TGI4 173 aa13□□□□□ -0.33
CLIP4-201ENST00000320081 RPL35AP18077 110 aaKnown RBP13□□□□□ -0.33
CLIP4-201ENST00000320081 IGFL2Q6UWQ7 119 aa13□□□□□ -0.33
CLIP4-201ENST00000320081 DYNAPQ8N1N2 210 aa13□□□□□ -0.33
CLIP4-201ENST00000320081 TTTY13Q9BZ97 58 aa13□□□□□ -0.33
CLIP4-201ENST00000320081 SIGLEC8Q9NYZ4 499 aa13□□□□□ -0.33
CLIP4-201ENST00000320081 TNRC6AQ8NDV7 1962 aaKnown RBP13□□□□□ -0.33
CLIP4-201ENST00000320081 UBE2E1P51965 193 aa12.99□□□□□ -0.33
CLIP4-201ENST00000320081 C20orf144Q9BQM9 153 aa12.99□□□□□ -0.33
CLIP4-201ENST00000320081 BLCAPP62952 87 aa12.99□□□□□ -0.33
CLIP4-201ENST00000320081 RASL11AQ6T310 242 aa12.99□□□□□ -0.33
CLIP4-201ENST00000320081 C9orf139Q6ZV77 190 aa12.99□□□□□ -0.33
CLIP4-201ENST00000320081 SMAGPQ0VAQ4 97 aa12.99□□□□□ -0.33
CLIP4-201ENST00000320081 H7C1H1 209 aa12.99□□□□□ -0.33
CLIP4-201ENST00000320081 OVOL1O14753 267 aa12.99□□□□□ -0.33
CLIP4-201ENST00000320081 EGR2P11161 476 aaPredicted RBP12.99□□□□□ -0.33
CLIP4-201ENST00000320081 ORMDL2Q53FV1 153 aa12.98□□□□□ -0.33
CLIP4-201ENST00000320081 LINC00311Q8N616 119 aa12.98□□□□□ -0.33
CLIP4-201ENST00000320081 FAM167A-AS1Q96KT0 104 aa12.98□□□□□ -0.33
CLIP4-201ENST00000320081 XCL2Q9UBD3 114 aa12.98□□□□□ -0.33
CLIP4-201ENST00000320081 TP73-AS1Q9UF72 201 aa12.98□□□□□ -0.33
CLIP4-201ENST00000320081 PAX1P15863 534 aa12.98□□□□□ -0.33
CLIP4-201ENST00000320081 DKK2Q9UBU2 259 aa12.98□□□□□ -0.33
CLIP4-201ENST00000320081 CIRBPQ14011 172 aaKnown RBP12.98□□□□□ -0.33
CLIP4-201ENST00000320081 LYPD1Q8N2G4 141 aa12.98□□□□□ -0.33
CLIP4-201ENST00000320081 KLHL30-AS1Q8NEE0 82 aa12.98□□□□□ -0.33
CLIP4-201ENST00000320081 USP24Q9UPU5 2620 aa12.97□□□□□ -0.33
CLIP4-201ENST00000320081 TRGV1A0A0A0MS02 117 aa12.97□□□□□ -0.33
CLIP4-201ENST00000320081 TRBV7-1A0A0A6YYK4 115 aa12.97□□□□□ -0.33
CLIP4-201ENST00000320081 OOSP1A8MZH6 123 aa12.97□□□□□ -0.33
CLIP4-201ENST00000320081 K7EIM0 57 aa12.97□□□□□ -0.33
CLIP4-201ENST00000320081 MSMBP08118 114 aa12.97□□□□□ -0.33
CLIP4-201ENST00000320081 PAPPA-AS1Q5QFB9 102 aa12.97□□□□□ -0.33
CLIP4-201ENST00000320081 DAZ1Q9NQZ3 744 aaKnown RBP12.97□□□□□ -0.33
CLIP4-201ENST00000320081 LAMA1P25391 3075 aa12.97□□□□□ -0.33
CLIP4-201ENST00000320081 H3BRN7 92 aa12.97□□□□□ -0.33
CLIP4-201ENST00000320081 HSD52Q0P140 79 aa12.97□□□□□ -0.33
CLIP4-201ENST00000320081 PYGO2Q9BRQ0 406 aa12.97□□□□□ -0.33
CLIP4-201ENST00000320081 CFHR3Q02985 330 aa12.96□□□□□ -0.33
CLIP4-201ENST00000320081 C1orf159Q96HA4 380 aa12.96□□□□□ -0.33
CLIP4-201ENST00000320081 SPXQ9BT56 116 aa12.96□□□□□ -0.33
CLIP4-201ENST00000320081 DEFB136Q30KP8 78 aa12.96□□□□□ -0.33
CLIP4-201ENST00000320081 ANXA2RQ3ZCQ2 193 aa12.96□□□□□ -0.33
CLIP4-201ENST00000320081 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.33
CLIP4-201ENST00000320081 MS4A6AQ9H2W1 248 aa12.96□□□□□ -0.33
CLIP4-201ENST00000320081 DPH3P1Q9H4G8 78 aa12.96□□□□□ -0.33
CLIP4-201ENST00000320081 KAAG1Q9UBP8 84 aa12.96□□□□□ -0.33
CLIP4-201ENST00000320081 IGHV2-70DA0A0C4DH43 119 aa12.96□□□□□ -0.33
CLIP4-201ENST00000320081 UBE2V1Q13404 147 aa12.96□□□□□ -0.33
CLIP4-201ENST00000320081 GAGE12BA1L429 117 aa12.96□□□□□ -0.34
CLIP4-201ENST00000320081 SNCGO76070 127 aa12.96□□□□□ -0.34
CLIP4-201ENST00000320081 Q5PR19 223 aa12.96□□□□□ -0.34
CLIP4-201ENST00000320081 IGHV3-38A0A0C4DH36 116 aa12.95□□□□□ -0.34
CLIP4-201ENST00000320081 SAP30O75446 220 aa12.95□□□□□ -0.34
CLIP4-201ENST00000320081 AGPAT4-IT1Q9H0P7 198 aa12.95□□□□□ -0.34
CLIP4-201ENST00000320081 IGHV1-69DA0A0B4J2H0 117 aa12.95□□□□□ -0.34
CLIP4-201ENST00000320081 IGHV1-69P01742 117 aa12.95□□□□□ -0.34
CLIP4-201ENST00000320081 PDE6HQ13956 83 aa12.95□□□□□ -0.34
CLIP4-201ENST00000320081 DTX2Q86UW9 622 aa12.95□□□□□ -0.34
CLIP4-201ENST00000320081 TRAV13-1A0A0B4J241 112 aa12.95□□□□□ -0.34
CLIP4-201ENST00000320081 THAP8Q8NA92 274 aa12.95□□□□□ -0.34
CLIP4-201ENST00000320081 Q8NA96 180 aa12.95□□□□□ -0.34
CLIP4-201ENST00000320081 WIPF2Q8TF74 440 aaPredicted RBP12.95□□□□□ -0.34
CLIP4-201ENST00000320081 MRPL35Q9NZE8 188 aaKnown RBP12.95□□□□□ -0.34
CLIP4-201ENST00000320081 PRAC2D3DTV9 90 aa12.94□□□□□ -0.34
CLIP4-201ENST00000320081 GNRH2O43555 120 aa12.94□□□□□ -0.34
CLIP4-201ENST00000320081 DAZAP2Q15038 168 aaPredicted RBP12.94□□□□□ -0.34
CLIP4-201ENST00000320081 C1orf122Q6ZSJ8 110 aa12.94□□□□□ -0.34
CLIP4-201ENST00000320081 FAM110DQ8TAY7 271 aaPredicted RBP12.94□□□□□ -0.34
CLIP4-201ENST00000320081 FAM231BA6NCW3 169 aa12.94□□□□□ -0.34
CLIP4-201ENST00000320081 ZNF503Q96F45 646 aa12.94□□□□□ -0.34
CLIP4-201ENST00000320081 IGHV4-61A0A0C4DH41 118 aa12.94□□□□□ -0.34
CLIP4-201ENST00000320081 HOXA3O43365 443 aaPredicted RBP12.94□□□□□ -0.34
CLIP4-201ENST00000320081 FAM231DQ6ZW35 169 aa12.94□□□□□ -0.34
CLIP4-201ENST00000320081 COX11Q9Y6N1 276 aa12.94□□□□□ -0.34
CLIP4-201ENST00000320081 NUP210LQ5VU65 1888 aa12.94□□□□□ -0.34
CLIP4-201ENST00000320081 K7ERJ3 54 aa12.93□□□□□ -0.34
CLIP4-201ENST00000320081 GTSF1Q8WW33 167 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms