RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ANKRD17O75179 2603 aaKnown RBP5.83□□□□□ -1.48
CNOT4-201ENST00000315544 ABCA12Q86UK0 2595 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 TRAV12-1A0A0B4J245 112 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 MUC21A0A0G2JKD1 596 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 MUC21A0A140T8X8 626 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 OR4C46A6NHA9 309 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 A8MWL6 223 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 CHEK1O14757 476 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 UBE2D1P51668 147 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 KLRD1Q13241 179 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 MUC21Q5SSG8 566 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 CENPEQ02224 2701 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 OR2T8A6NH00 312 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 FBLL1A6NHQ2 334 aaKnown RBP5.82□□□□□ -1.48
CNOT4-201ENST00000315544 ERHP84090 104 aaKnown RBP5.82□□□□□ -1.48
CNOT4-201ENST00000315544 ERCC8Q13216 396 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 AMTNQ6UX39 209 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 Q8N2B8 174 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 RABAC1Q9UI14 185 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 HIGD1AQ9Y241 93 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 E9PLD3 99 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 G3V4G9 280 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 AMTP48728 403 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.82□□□□□ -1.48
CNOT4-201ENST00000315544 A0A1B0GUT8 65 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 LIPFP07098 398 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 EDN2P20800 178 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 DEFB108BQ8NET1 73 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 VWFP04275 2813 aa5.82□□□□□ -1.48
CNOT4-201ENST00000315544 SMAD7O15105 426 aaKnown RBP5.81□□□□□ -1.48
CNOT4-201ENST00000315544 CRLF1O75462 422 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 SCGB1D1O95968 90 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 CD3EP07766 207 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 HIST1H1AQ02539 215 aaPredicted RBP5.81□□□□□ -1.48
CNOT4-201ENST00000315544 AMN1Q8IY45 258 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 WFDC11Q8NEX6 87 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 PGLYRP4Q96LB8 373 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 SGK494Q96LW2 274 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 MCRIP2Q9BUT9 160 aaKnown RBP5.81□□□□□ -1.48
CNOT4-201ENST00000315544 AGPAT4-IT1Q9H0P7 198 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 J3QLI3 93 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 COX7A2P2O60397 106 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 IGHG2P01859 326 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 POLR2KP53803 58 aaKnown RBP5.81□□□□□ -1.48
CNOT4-201ENST00000315544 Q6ZS46 218 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 C9orf85Q96MD7 179 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 LENEPQ9Y5L5 61 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 D6R8Y8 96 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 UBE2E1P51965 193 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 VMO1Q7Z5L0 202 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 PTH2Q96A98 100 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 TOMM6Q96B49 74 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 DKK2Q9UBU2 259 aa5.81□□□□□ -1.48
CNOT4-201ENST00000315544 IGHV3-72A0A0B4J1Y9 119 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 H3BRM9 83 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 UBE2D3P61077 147 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 UBE2D2P62837 147 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 ZFYVE26Q68DK2 2539 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 DNAH2Q9P225 4427 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 ZNF705FA8MVS1 300 aaPredicted RBP5.8□□□□□ -1.48
CNOT4-201ENST00000315544 SPINK4O60575 86 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 LY6HO94772 140 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 APOA2P02652 100 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 RBMY1A1P0DJD3 496 aaKnown RBP5.8□□□□□ -1.48
CNOT4-201ENST00000315544 RBMY1CP0DJD4 496 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 RBMY1FQ15415 496 aaKnown RBP5.8□□□□□ -1.48
CNOT4-201ENST00000315544 PCP2Q8IVA1 136 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 A6NDX4 124 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 M0QXV9 152 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 VMA21Q3ZAQ7 101 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 GOLT1AQ6ZVE7 132 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 NRGNQ92686 78 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 CCL19Q99731 98 aa5.8□□□□□ -1.48
CNOT4-201ENST00000315544 DNAH8Q96JB1 4490 aa5.79□□□□□ -1.48
CNOT4-201ENST00000315544 IGHV4-30-2A0A087WSY4 118 aa5.79□□□□□ -1.48
CNOT4-201ENST00000315544 NDUFB3O43676 98 aa5.79□□□□□ -1.48
CNOT4-201ENST00000315544 HIF1ANQ9NWT6 349 aa5.79□□□□□ -1.48
CNOT4-201ENST00000315544 AGRNO00468 2067 aa5.79□□□□□ -1.48
CNOT4-201ENST00000315544 CACNA1BQ00975 2339 aa5.79□□□□□ -1.48
CNOT4-201ENST00000315544 C9orf118A6NHY6 69 aa5.79□□□□□ -1.48
CNOT4-201ENST00000315544 RAB1BQ9H0U4 201 aa5.79□□□□□ -1.48
CNOT4-201ENST00000315544 IGKV2-40A0A087WW87 121 aaPredicted RBP5.79□□□□□ -1.48
CNOT4-201ENST00000315544 IGKV2D-40P01614 121 aaPredicted RBP5.79□□□□□ -1.48
CNOT4-201ENST00000315544 GATA3P23771 443 aa5.79□□□□□ -1.48
CNOT4-201ENST00000315544 UNQ9165/PRO28630Q6UXU0 137 aa5.79□□□□□ -1.48
CNOT4-201ENST00000315544 DPM3Q9P2X0 92 aa5.79□□□□□ -1.48
CNOT4-201ENST00000315544 TRBV6-5A0A0K0K1A5 114 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 H3BTX0 84 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 LY6G6DO95868 133 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 TRBV12-3P01733 135 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 P0DMU3 169 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 FAM231AP0DMU4 169 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 FAM231CP0DMU5 169 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 NTF3P20783 257 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 PSMB8P28062 276 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 FAM162BQ5T6X4 162 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 ABCA4P78363 2273 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 AVPP01185 164 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 GATA1P15976 413 aaPredicted RBP5.78□□□□□ -1.48
CNOT4-201ENST00000315544 FCER1GP30273 86 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms