RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 Q8N8P6 123 aa11.39□□□□□ -0.59
COL6A2-202ENST00000310645 CFHR4Q92496 578 aa11.39□□□□□ -0.59
COL6A2-202ENST00000310645 PLA2G2CQ5R387 149 aa11.39□□□□□ -0.59
COL6A2-202ENST00000310645 SMPXQ9UHP9 88 aa11.39□□□□□ -0.59
COL6A2-202ENST00000310645 SMAD5-AS1Q9Y6J3 95 aa11.39□□□□□ -0.59
COL6A2-202ENST00000310645 IGHV3-49A0A0A0MS15 119 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 SHISA9B4DS77 424 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 SPRY2O43597 315 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 SCGB1A1P11684 91 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 FANCD2OSQ96PS1 177 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 KAAG1Q9UBP8 84 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 A0A0G2JNJ9 132 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 RRN3P1Q2M238 152 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 Q9UFV3 132 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 J3KRW8 73 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 APOMO95445 188 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 IGHG4P01861 327 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 KLRD1Q13241 179 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 LAGE3Q14657 143 aa11.38□□□□□ -0.59
COL6A2-202ENST00000310645 Q6ZQT7 251 aa11.37□□□□□ -0.59
COL6A2-202ENST00000310645 LOC107984156A0A0G2JMH3 177 aa11.37□□□□□ -0.59
COL6A2-202ENST00000310645 PSMG4Q5JS54 123 aa11.37□□□□□ -0.59
COL6A2-202ENST00000310645 ARL17AQ8IVW1 177 aa11.37□□□□□ -0.59
COL6A2-202ENST00000310645 OR11H12B2RN74 326 aa11.37□□□□□ -0.59
COL6A2-202ENST00000310645 OR11H1Q8NG94 326 aa11.37□□□□□ -0.59
COL6A2-202ENST00000310645 OR11H2Q8NH07 326 aa11.37□□□□□ -0.59
COL6A2-202ENST00000310645 LRBAP50851 2863 aa11.36□□□□□ -0.59
COL6A2-202ENST00000310645 E7EQL1 145 aa11.36□□□□□ -0.59
COL6A2-202ENST00000310645 SPATA25Q9BR10 227 aa11.36□□□□□ -0.59
COL6A2-202ENST00000310645 PGPEP1Q9NXJ5 209 aa11.36□□□□□ -0.59
COL6A2-202ENST00000310645 SPANXN1Q5VSR9 72 aa11.36□□□□□ -0.59
COL6A2-202ENST00000310645 ZNF418Q8TF45 676 aaPredicted RBP11.36□□□□□ -0.59
COL6A2-202ENST00000310645 DEFB104AQ8WTQ1 72 aa11.36□□□□□ -0.59
COL6A2-202ENST00000310645 MRPL16Q9NX20 251 aaKnown RBP11.36□□□□□ -0.59
COL6A2-202ENST00000310645 C11orf21Q9P2W6 132 aa11.36□□□□□ -0.59
COL6A2-202ENST00000310645 A0A087WX48 190 aa11.35□□□□□ -0.59
COL6A2-202ENST00000310645 F8W735 103 aaPredicted RBP11.35□□□□□ -0.59
COL6A2-202ENST00000310645 TRAV26-1A0A087WT03 109 aa11.35□□□□□ -0.59
COL6A2-202ENST00000310645 IGKV3D-20A0A0C4DH25 116 aa11.35□□□□□ -0.59
COL6A2-202ENST00000310645 NDPQ00604 133 aa11.35□□□□□ -0.59
COL6A2-202ENST00000310645 SRSF1Q07955 248 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL6A2-202ENST00000310645 SYT8Q8NBV8 401 aa11.35□□□□□ -0.59
COL6A2-202ENST00000310645 ANKRD11Q6UB99 2663 aaPredicted RBP11.35□□□□□ -0.59
COL6A2-202ENST00000310645 HOXA3O43365 443 aaPredicted RBP11.35□□□□□ -0.59
COL6A2-202ENST00000310645 LY6HO94772 140 aa11.35□□□□□ -0.59
COL6A2-202ENST00000310645 IGLV11-55A0A075B6I3 123 aa11.34□□□□□ -0.59
COL6A2-202ENST00000310645 FAM57AQ8TBR7 257 aa11.34□□□□□ -0.59
COL6A2-202ENST00000310645 IGLV2-18A0A075B6J9 118 aa11.34□□□□□ -0.59
COL6A2-202ENST00000310645 TGFAP01135 160 aa11.34□□□□□ -0.59
COL6A2-202ENST00000310645 PSMB2P49721 201 aa11.34□□□□□ -0.59
COL6A2-202ENST00000310645 CTSGP08311 255 aa11.34□□□□□ -0.59
COL6A2-202ENST00000310645 SCGB1D4Q6XE38 83 aa11.34□□□□□ -0.59
COL6A2-202ENST00000310645 PTH2Q96A98 100 aa11.34□□□□□ -0.59
COL6A2-202ENST00000310645 DPM3Q9P2X0 92 aa11.34□□□□□ -0.59
COL6A2-202ENST00000310645 SRSF9Q13242 221 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL6A2-202ENST00000310645 C5orf64Q2M2E5 130 aa11.33□□□□□ -0.6
COL6A2-202ENST00000310645 ZNF502Q8TBZ5 544 aa11.33□□□□□ -0.6
COL6A2-202ENST00000310645 VKORC1Q9BQB6 163 aa11.33□□□□□ -0.6
COL6A2-202ENST00000310645 PRO0461Q9UI25 63 aa11.33□□□□□ -0.6
COL6A2-202ENST00000310645 TMEM190Q8WZ59 177 aa11.33□□□□□ -0.6
COL6A2-202ENST00000310645 SCGB3A1Q96QR1 104 aa11.33□□□□□ -0.6
COL6A2-202ENST00000310645 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
COL6A2-202ENST00000310645 MYMXA0A1B0GTQ4 84 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 LINC01549A6NIU2 74 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 TAL2Q16559 108 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 COX8CQ7Z4L0 72 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 GLMPQ8WWB7 406 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 RNF5Q99942 180 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 CNFNQ9BYD5 112 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 HIF1ANQ9NWT6 349 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 TRBV7-3A0A075B6L6 115 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 AGPAT4-IT1Q9H0P7 198 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 GEMIN7Q9H840 131 aaKnown RBP11.32□□□□□ -0.6
COL6A2-202ENST00000310645 SVEP1Q4LDE5 3571 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 LY6LH3BQJ8 138 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 H3BVH4 76 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 HLA-DRB4P13762 266 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 PLNP26678 52 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 LINC01559Q495D7 138 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 NRACQ8N912 160 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 RAXQ9Y2V3 346 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 HLA-DRB4X5D2U9 266 aa11.32□□□□□ -0.6
COL6A2-202ENST00000310645 OTOGLQ3ZCN5 2332 aa11.31□□□□□ -0.6
COL6A2-202ENST00000310645 LINC01546A6NGU7 62 aa11.31□□□□□ -0.6
COL6A2-202ENST00000310645 H7C1H1 209 aa11.31□□□□□ -0.6
COL6A2-202ENST00000310645 MORN3Q6PF18 240 aaPredicted RBP11.31□□□□□ -0.6
COL6A2-202ENST00000310645 Q6ZS92 163 aa11.31□□□□□ -0.6
COL6A2-202ENST00000310645 AKAP6Q13023 2319 aa11.31□□□□□ -0.6
COL6A2-202ENST00000310645 SPINK8P0C7L1 97 aa11.31□□□□□ -0.6
COL6A2-202ENST00000310645 FOXI1Q12951 378 aa11.31□□□□□ -0.6
COL6A2-202ENST00000310645 ZFP2Q6ZN57 461 aa11.31□□□□□ -0.6
COL6A2-202ENST00000310645 F8VRH5 84 aa11.31□□□□□ -0.6
COL6A2-202ENST00000310645 M0R381 172 aa11.31□□□□□ -0.6
COL6A2-202ENST00000310645 CRYBA4P53673 196 aa11.31□□□□□ -0.6
COL6A2-202ENST00000310645 TMEM78Q5T7P6 136 aa11.3□□□□□ -0.6
COL6A2-202ENST00000310645 ZNF815PA8K554 130 aa11.3□□□□□ -0.6
COL6A2-202ENST00000310645 EMP1P54849 157 aa11.3□□□□□ -0.6
COL6A2-202ENST00000310645 ANKHD1Q8IWZ3 2542 aaKnown RBP11.3□□□□□ -0.6
COL6A2-202ENST00000310645 MT-ATP8P03928 68 aa11.29□□□□□ -0.6
COL6A2-202ENST00000310645 LGALS1P09382 135 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms