RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 FAM223BA6NKX1 122 aa14.27□□□□□ -0.13
RNF139-201ENST00000303545 CKS2P33552 79 aa14.27□□□□□ -0.13
RNF139-201ENST00000303545 FOXE3Q13461 319 aa14.27□□□□□ -0.13
RNF139-201ENST00000303545 FAM223AQ8IWN6 122 aa14.27□□□□□ -0.13
RNF139-201ENST00000303545 MAP1LC3CQ9BXW4 147 aa14.27□□□□□ -0.13
RNF139-201ENST00000303545 NPYP01303 97 aa14.26□□□□□ -0.13
RNF139-201ENST00000303545 TMEM78Q5T7P6 136 aa14.26□□□□□ -0.13
RNF139-201ENST00000303545 KLHDC1Q8N7A1 406 aa14.26□□□□□ -0.13
RNF139-201ENST00000303545 DOPEY2Q9Y3R5 2298 aa14.26□□□□□ -0.13
RNF139-201ENST00000303545 IGKV3D-20A0A0C4DH25 116 aa14.26□□□□□ -0.13
RNF139-201ENST00000303545 A6NDX4 124 aa14.26□□□□□ -0.13
RNF139-201ENST00000303545 NDUFS8O00217 210 aa14.26□□□□□ -0.13
RNF139-201ENST00000303545 SPRY2O43597 315 aa14.26□□□□□ -0.13
RNF139-201ENST00000303545 EDN2P20800 178 aa14.26□□□□□ -0.13
RNF139-201ENST00000303545 ORMDL3Q8N138 153 aa14.26□□□□□ -0.13
RNF139-201ENST00000303545 OR8A1Q8NGG7 326 aa14.25□□□□□ -0.13
RNF139-201ENST00000303545 U3KQE9 123 aa14.25□□□□□ -0.13
RNF139-201ENST00000303545 SRD5A1P18405 259 aa14.25□□□□□ -0.13
RNF139-201ENST00000303545 HINT1P49773 126 aaPredicted RBP14.25□□□□□ -0.13
RNF139-201ENST00000303545 C21orf62-AS1Q17RA5 79 aa14.25□□□□□ -0.13
RNF139-201ENST00000303545 PRSS57Q6UWY2 283 aa14.25□□□□□ -0.13
RNF139-201ENST00000303545 WFDC3Q8IUB2 231 aa14.25□□□□□ -0.13
RNF139-201ENST00000303545 ARL6IP6Q8N6S5 226 aa14.25□□□□□ -0.13
RNF139-201ENST00000303545 GATA1P15976 413 aaPredicted RBP14.24□□□□□ -0.13
RNF139-201ENST00000303545 EVI2AP22794 236 aa14.24□□□□□ -0.13
RNF139-201ENST00000303545 TSPOP30536 169 aa14.24□□□□□ -0.13
RNF139-201ENST00000303545 TCTAP57738 103 aa14.24□□□□□ -0.13
RNF139-201ENST00000303545 RPS20P60866 119 aaKnown RBP14.24□□□□□ -0.13
RNF139-201ENST00000303545 ZNF738Q8NE65 137 aa14.24□□□□□ -0.13
RNF139-201ENST00000303545 A0A096LNJ9 63 aa14.24□□□□□ -0.13
RNF139-201ENST00000303545 CRXO43186 299 aaPredicted RBP14.24□□□□□ -0.13
RNF139-201ENST00000303545 IGHG2P01859 326 aa14.24□□□□□ -0.13
RNF139-201ENST00000303545 OR4X2Q8NGF9 303 aa14.24□□□□□ -0.13
RNF139-201ENST00000303545 GLMPQ8WWB7 406 aa14.24□□□□□ -0.13
RNF139-201ENST00000303545 PSMG3-AS1Q96PY0 264 aa14.24□□□□□ -0.13
RNF139-201ENST00000303545 FBLL1A6NHQ2 334 aaKnown RBP14.23□□□□□ -0.13
RNF139-201ENST00000303545 PRR9Q5T870 116 aa14.23□□□□□ -0.13
RNF139-201ENST00000303545 STPG4Q8N801 248 aa14.23□□□□□ -0.13
RNF139-201ENST00000303545 HSPB8Q9UJY1 196 aa14.23□□□□□ -0.13
RNF139-201ENST00000303545 CBY1Q9Y3M2 126 aa14.23□□□□□ -0.13
RNF139-201ENST00000303545 ABCA12Q86UK0 2595 aa14.23□□□□□ -0.13
RNF139-201ENST00000303545 LAMTOR2Q9Y2Q5 125 aa14.23□□□□□ -0.13
RNF139-201ENST00000303545 MXRA5Q9NR99 2828 aa14.22□□□□□ -0.13
RNF139-201ENST00000303545 TM4SF20Q53R12 229 aa14.22□□□□□ -0.13
RNF139-201ENST00000303545 C10orf99Q6UWK7 81 aa14.22□□□□□ -0.13
RNF139-201ENST00000303545 GPHB5Q86YW7 130 aa14.22□□□□□ -0.13
RNF139-201ENST00000303545 OR10AG1Q8NH19 301 aa14.22□□□□□ -0.13
RNF139-201ENST00000303545 U3KQK5 164 aa14.22□□□□□ -0.13
RNF139-201ENST00000303545 RBAKDNA6NC62 111 aa14.22□□□□□ -0.13
RNF139-201ENST00000303545 F6UB75 175 aa14.22□□□□□ -0.13
RNF139-201ENST00000303545 RNF185Q96GF1 192 aa14.22□□□□□ -0.13
RNF139-201ENST00000303545 ZNF747Q9BV97 191 aa14.22□□□□□ -0.13
RNF139-201ENST00000303545 C20orf202A1L168 122 aa14.21□□□□□ -0.13
RNF139-201ENST00000303545 B4DSR2 109 aa14.21□□□□□ -0.13
RNF139-201ENST00000303545 IGHV4-59P01825 116 aa14.21□□□□□ -0.13
RNF139-201ENST00000303545 CRIP2P52943 208 aaPredicted RBP14.21□□□□□ -0.13
RNF139-201ENST00000303545 LINC01559Q495D7 138 aa14.21□□□□□ -0.13
RNF139-201ENST00000303545 DMRTA1Q5VZB9 504 aa14.21□□□□□ -0.13
RNF139-201ENST00000303545 BBC3Q96PG8 261 aaPredicted RBP14.21□□□□□ -0.13
RNF139-201ENST00000303545 TMEM191AQ9H0A3 160 aa14.21□□□□□ -0.13
RNF139-201ENST00000303545 Q6ZVH6 145 aa14.21□□□□□ -0.14
RNF139-201ENST00000303545 DEFB112Q30KQ8 113 aa14.19□□□□□ -0.14
RNF139-201ENST00000303545 PTPN13Q12923 2485 aa14.19□□□□□ -0.14
RNF139-201ENST00000303545 NDUFA4O00483 81 aa14.19□□□□□ -0.14
RNF139-201ENST00000303545 KIR3DS1Q14943 382 aa14.19□□□□□ -0.14
RNF139-201ENST00000303545 PET117Q6UWS5 81 aa14.19□□□□□ -0.14
RNF139-201ENST00000303545 TRAV26-2A0A0B4J265 109 aa14.18□□□□□ -0.14
RNF139-201ENST00000303545 SNAI2O43623 268 aa14.18□□□□□ -0.14
RNF139-201ENST00000303545 NPFFR1Q9GZQ6 430 aa14.18□□□□□ -0.14
RNF139-201ENST00000303545 UFC1Q9Y3C8 167 aa14.18□□□□□ -0.14
RNF139-201ENST00000303545 C9orf47Q6ZRZ4 202 aa14.18□□□□□ -0.14
RNF139-201ENST00000303545 WFDC12Q8WWY7 111 aa14.18□□□□□ -0.14
RNF139-201ENST00000303545 PCP4P48539 62 aa14.17□□□□□ -0.14
RNF139-201ENST00000303545 C18orf15Q96N68 181 aa14.17□□□□□ -0.14
RNF139-201ENST00000303545 H3BVH4 76 aa14.17□□□□□ -0.14
RNF139-201ENST00000303545 TGFAP01135 160 aa14.17□□□□□ -0.14
RNF139-201ENST00000303545 COL5A1-AS1Q5SY13 56 aa14.17□□□□□ -0.14
RNF139-201ENST00000303545 HSBP1L1C9JCN9 74 aa14.16□□□□□ -0.14
RNF139-201ENST00000303545 HIST1H1AQ02539 215 aaPredicted RBP14.16□□□□□ -0.14
RNF139-201ENST00000303545 RHPN1-AS1Q9BWJ2 59 aa14.16□□□□□ -0.14
RNF139-201ENST00000303545 TEX15Q9BXT5 2789 aa14.16□□□□□ -0.14
RNF139-201ENST00000303545 IGHV7-4-1A0A0J9YVY3 117 aa14.16□□□□□ -0.14
RNF139-201ENST00000303545 TMEM8BA6NDV4 472 aa14.16□□□□□ -0.14
RNF139-201ENST00000303545 SRSF2Q01130 221 aaKnown RBP14.16□□□□□ -0.14
RNF139-201ENST00000303545 LINC01545Q5VT33 79 aa14.16□□□□□ -0.14
RNF139-201ENST00000303545 C9orf139Q6ZV77 190 aa14.16□□□□□ -0.14
RNF139-201ENST00000303545 USMG5Q96IX5 58 aa14.16□□□□□ -0.14
RNF139-201ENST00000303545 SPOCK3Q9BQ16 436 aa14.15□□□□□ -0.14
RNF139-201ENST00000303545 TCF21O43680 179 aa14.14□□□□□ -0.15
RNF139-201ENST00000303545 TNFRSF6BO95407 300 aa14.14□□□□□ -0.15
RNF139-201ENST00000303545 CACNG7P62955 275 aa14.14□□□□□ -0.15
RNF139-201ENST00000303545 MRPL53Q96EL3 112 aaKnown RBP14.14□□□□□ -0.15
RNF139-201ENST00000303545 CNFNQ9BYD5 112 aa14.14□□□□□ -0.15
RNF139-201ENST00000303545 NBPF19A0A087WUL8 3843 aa14.14□□□□□ -0.15
RNF139-201ENST00000303545 IGLV1-40P01703 118 aa14.14□□□□□ -0.15
RNF139-201ENST00000303545 KRTAP10-9P60411 292 aa14.14□□□□□ -0.15
RNF139-201ENST00000303545 SPANXN1Q5VSR9 72 aa14.14□□□□□ -0.15
RNF139-201ENST00000303545 ST20Q9HBF5 79 aa14.14□□□□□ -0.15
RNF139-201ENST00000303545 ZNF469Q96JG9 3925 aaPredicted RBP14.14□□□□□ -0.15
RNF139-201ENST00000303545 EPG5Q9HCE0 2579 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms