RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 SDHAF1A6NFY7 115 aa12.84□□□□□ -0.35
BRD3-201ENST00000303407 K7EIM0 57 aa12.84□□□□□ -0.35
BRD3-201ENST00000303407 CDPF1Q6NVV7 123 aa12.84□□□□□ -0.35
BRD3-201ENST00000303407 RNF114Q9Y508 228 aa12.84□□□□□ -0.35
BRD3-201ENST00000303407 DEFB130BP0DP73 79 aa12.84□□□□□ -0.35
BRD3-201ENST00000303407 DEFB130AP0DP74 79 aa12.84□□□□□ -0.35
BRD3-201ENST00000303407 COX8AP10176 69 aa12.84□□□□□ -0.35
BRD3-201ENST00000303407 CFHR3Q02985 330 aa12.84□□□□□ -0.35
BRD3-201ENST00000303407 CENPVL3A0A0U1RRI6 287 aa12.84□□□□□ -0.35
BRD3-201ENST00000303407 RHODO00212 210 aa12.84□□□□□ -0.35
BRD3-201ENST00000303407 MSMPQ1L6U9 139 aa12.84□□□□□ -0.35
BRD3-201ENST00000303407 S100A7L2Q5SY68 101 aa12.84□□□□□ -0.35
BRD3-201ENST00000303407 IGHV7-81A0A0B4J1V7 117 aa12.83□□□□□ -0.36
BRD3-201ENST00000303407 RBAKDNA6NC62 111 aa12.83□□□□□ -0.36
BRD3-201ENST00000303407 PAX4O43316 350 aa12.83□□□□□ -0.36
BRD3-201ENST00000303407 ADORA2A-AS1P86434 159 aa12.83□□□□□ -0.36
BRD3-201ENST00000303407 MAJINQ3KP22 176 aa12.83□□□□□ -0.36
BRD3-201ENST00000303407 AZU1P20160 251 aa12.83□□□□□ -0.36
BRD3-201ENST00000303407 FOXE3Q13461 319 aa12.83□□□□□ -0.36
BRD3-201ENST00000303407 GAGE12BA1L429 117 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 GAGE12JA6NER3 117 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 GAGE1Q13065 139 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 GAGE4Q13068 117 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 GAGE5Q13069 117 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 PYGO2Q9BRQ0 406 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 SMIM2Q9BVW6 85 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 DEFB112Q30KQ8 113 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 IGLV11-55A0A075B6I3 123 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 CRIP3Q6Q6R5 217 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 GATD1Q8NB37 220 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 AGPAT4-IT1Q9H0P7 198 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 F6UB75 175 aa12.82□□□□□ -0.36
BRD3-201ENST00000303407 MRPL53Q96EL3 112 aaKnown RBP12.82□□□□□ -0.36
BRD3-201ENST00000303407 SPAG8Q99932 426 aaPredicted RBP12.82□□□□□ -0.36
BRD3-201ENST00000303407 LEPROTO15243 131 aa12.81□□□□□ -0.36
BRD3-201ENST00000303407 IGHV4-59P01825 116 aa12.81□□□□□ -0.36
BRD3-201ENST00000303407 PRIMA1Q86XR5 153 aa12.81□□□□□ -0.36
BRD3-201ENST00000303407 MRPL35Q9NZE8 188 aaKnown RBP12.81□□□□□ -0.36
BRD3-201ENST00000303407 CNOT1A5YKK6 2376 aaKnown RBP12.81□□□□□ -0.36
BRD3-201ENST00000303407 GPR179Q6PRD1 2367 aa12.81□□□□□ -0.36
BRD3-201ENST00000303407 ELANEP08246 267 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 C6orf226Q5I0X4 101 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 Q6ZPA2 131 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 NUP210LQ5VU65 1888 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 CEP250Q9BV73 2442 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 IGHV3-38A0A0C4DH36 116 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 IGHV4-61A0A0C4DH41 118 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 GNRH2O43555 120 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 IGHV4-38-2P0DP08 117 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 HLA-DRB4P13762 266 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 LURAP1LQ8IV03 231 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 FAM167A-AS1Q96KT0 104 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 HLA-DRB4X5D2U9 266 aa12.8□□□□□ -0.36
BRD3-201ENST00000303407 TEX22C9J3V5 150 aa12.79□□□□□ -0.36
BRD3-201ENST00000303407 C2orf82Q6UX34 121 aa12.79□□□□□ -0.36
BRD3-201ENST00000303407 IGKV1-17P01599 117 aa12.79□□□□□ -0.36
BRD3-201ENST00000303407 ADAMTSL5Q6ZMM2 481 aa12.79□□□□□ -0.36
BRD3-201ENST00000303407 GHRHP01286 108 aa12.79□□□□□ -0.36
BRD3-201ENST00000303407 SS18Q15532 418 aa12.79□□□□□ -0.36
BRD3-201ENST00000303407 DKK2Q9UBU2 259 aa12.79□□□□□ -0.36
BRD3-201ENST00000303407 E7EUB6 86 aa12.79□□□□□ -0.36
BRD3-201ENST00000303407 C9orf118A6NHY6 69 aa12.79□□□□□ -0.36
BRD3-201ENST00000303407 C20orf78Q9BR46 151 aa12.79□□□□□ -0.36
BRD3-201ENST00000303407 NCKAP5O14513 1909 aa12.78□□□□□ -0.36
BRD3-201ENST00000303407 ANAPC13Q9BS18 74 aa12.78□□□□□ -0.36
BRD3-201ENST00000303407 VPREB3Q9UKI3 123 aa12.78□□□□□ -0.36
BRD3-201ENST00000303407 NUPR1O60356 82 aa12.77□□□□□ -0.36
BRD3-201ENST00000303407 CTSGP08311 255 aa12.77□□□□□ -0.36
BRD3-201ENST00000303407 ALPK3Q96L96 1907 aa12.77□□□□□ -0.36
BRD3-201ENST00000303407 IGKV1OR2-108A0A075B7D4 117 aa12.77□□□□□ -0.37
BRD3-201ENST00000303407 IGHV4-30-2A0A087WSY4 118 aa12.77□□□□□ -0.37
BRD3-201ENST00000303407 WI2-2373I1.2A0A1W2PRP0 233 aa12.77□□□□□ -0.37
BRD3-201ENST00000303407 ZNRF2Q8NHG8 242 aa12.77□□□□□ -0.37
BRD3-201ENST00000303407 COA6Q5JTJ3 125 aaKnown RBP12.77□□□□□ -0.37
BRD3-201ENST00000303407 Q8N7P7 452 aa12.77□□□□□ -0.37
BRD3-201ENST00000303407 TRAV8-3A0A0A6YYJ7 113 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 FOXI2Q6ZQN5 318 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 ZNF625Q96I27 306 aaPredicted RBP12.76□□□□□ -0.37
BRD3-201ENST00000303407 ZNF747Q9BV97 191 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 TRBV25-1A0A075B6N4 114 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 INS-IGF2F8WCM5 200 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 GAGE7O76087 117 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 BVES-AS1Q5T3Y7 98 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 Q8N9W7 124 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 ATP6V0BQ99437 205 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 CST9LQ9H4G1 147 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 JPT2Q9H910 190 aa12.76□□□□□ -0.37
BRD3-201ENST00000303407 KLF2Q9Y5W3 355 aaPredicted RBP12.76□□□□□ -0.37
BRD3-201ENST00000303407 F8VRH5 84 aa12.75□□□□□ -0.37
BRD3-201ENST00000303407 IGLV1-47P01700 117 aa12.75□□□□□ -0.37
BRD3-201ENST00000303407 DOCK11Q5JSL3 2073 aa12.75□□□□□ -0.37
BRD3-201ENST00000303407 HOXD3P31249 432 aaPredicted RBP12.75□□□□□ -0.37
BRD3-201ENST00000303407 CEND1Q8N111 149 aa12.75□□□□□ -0.37
BRD3-201ENST00000303407 ZFP36P26651 326 aaKnown RBP12.75□□□□□ -0.37
BRD3-201ENST00000303407 P0C879 139 aa12.75□□□□□ -0.37
BRD3-201ENST00000303407 MRPL36Q9P0J6 103 aaKnown RBP12.75□□□□□ -0.37
BRD3-201ENST00000303407 DOCK7Q96N67 2140 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms