RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 H3BVH4 76 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 ATP5LO75964 103 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 ASCL5Q7RTU5 278 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 OR11H1Q8NG94 326 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 OR11H2Q8NH07 326 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 CFHR4Q92496 578 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 PTH2Q96A98 100 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 VKORC1Q9BQB6 163 aa11.41□□□□□ -0.58
COL6A2-201ENST00000300527 MRPS12O15235 138 aaKnown RBP11.4□□□□□ -0.58
COL6A2-201ENST00000300527 EMP1P54849 157 aa11.4□□□□□ -0.58
COL6A2-201ENST00000300527 SRSF9Q13242 221 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL6A2-201ENST00000300527 SYT8Q8NBV8 401 aa11.4□□□□□ -0.58
COL6A2-201ENST00000300527 ZNF502Q8TBZ5 544 aa11.4□□□□□ -0.58
COL6A2-201ENST00000300527 GLMPQ8WWB7 406 aa11.4□□□□□ -0.58
COL6A2-201ENST00000300527 HIGD1BQ9P298 99 aa11.4□□□□□ -0.58
COL6A2-201ENST00000300527 IGLV1-47P01700 117 aa11.4□□□□□ -0.59
COL6A2-201ENST00000300527 NBR2O15453 112 aa11.39□□□□□ -0.59
COL6A2-201ENST00000300527 IGLC6P0CF74 106 aa11.39□□□□□ -0.59
COL6A2-201ENST00000300527 RRN3P1Q2M238 152 aa11.39□□□□□ -0.59
COL6A2-201ENST00000300527 TM2D2Q9BX73 214 aa11.39□□□□□ -0.59
COL6A2-201ENST00000300527 M0R381 172 aa11.38□□□□□ -0.59
COL6A2-201ENST00000300527 CEACAM4O75871 244 aa11.38□□□□□ -0.59
COL6A2-201ENST00000300527 LAGE3Q14657 143 aa11.38□□□□□ -0.59
COL6A2-201ENST00000300527 NUP37Q8NFH4 326 aa11.38□□□□□ -0.59
COL6A2-201ENST00000300527 LRBAP50851 2863 aa11.38□□□□□ -0.59
COL6A2-201ENST00000300527 A0A0G2JNJ9 132 aa11.38□□□□□ -0.59
COL6A2-201ENST00000300527 ARL3P36405 182 aa11.38□□□□□ -0.59
COL6A2-201ENST00000300527 RAB1BQ9H0U4 201 aa11.38□□□□□ -0.59
COL6A2-201ENST00000300527 Q9UFV3 132 aa11.38□□□□□ -0.59
COL6A2-201ENST00000300527 LINC01549A6NIU2 74 aa11.37□□□□□ -0.59
COL6A2-201ENST00000300527 HLA-DRB4P13762 266 aa11.37□□□□□ -0.59
COL6A2-201ENST00000300527 Q8N8P6 123 aa11.37□□□□□ -0.59
COL6A2-201ENST00000300527 GEMIN7Q9H840 131 aaKnown RBP11.37□□□□□ -0.59
COL6A2-201ENST00000300527 HLA-DRB4X5D2U9 266 aa11.37□□□□□ -0.59
COL6A2-201ENST00000300527 HOXA3O43365 443 aaPredicted RBP11.37□□□□□ -0.59
COL6A2-201ENST00000300527 PDE6HQ13956 83 aa11.37□□□□□ -0.59
COL6A2-201ENST00000300527 ECSCRQ19T08 205 aa11.37□□□□□ -0.59
COL6A2-201ENST00000300527 SCGB3A1Q96QR1 104 aa11.37□□□□□ -0.59
COL6A2-201ENST00000300527 COL27A1Q8IZC6 1860 aaPredicted RBP11.37□□□□□ -0.59
COL6A2-201ENST00000300527 THBDP07204 575 aa11.37□□□□□ -0.59
COL6A2-201ENST00000300527 MGPP08493 103 aa11.37□□□□□ -0.59
COL6A2-201ENST00000300527 SPINK8P0C7L1 97 aa11.37□□□□□ -0.59
COL6A2-201ENST00000300527 ANKRD11Q6UB99 2663 aaPredicted RBP11.36□□□□□ -0.59
COL6A2-201ENST00000300527 RAXQ9Y2V3 346 aa11.36□□□□□ -0.59
COL6A2-201ENST00000300527 SMAD5-AS1Q9Y6J3 95 aa11.36□□□□□ -0.59
COL6A2-201ENST00000300527 E7EQL1 145 aa11.36□□□□□ -0.59
COL6A2-201ENST00000300527 NDPQ00604 133 aa11.36□□□□□ -0.59
COL6A2-201ENST00000300527 FANCD2OSQ96PS1 177 aa11.36□□□□□ -0.59
COL6A2-201ENST00000300527 C8orf31Q8N9H6 132 aa11.36□□□□□ -0.59
COL6A2-201ENST00000300527 C11orf21Q9P2W6 132 aa11.36□□□□□ -0.59
COL6A2-201ENST00000300527 CRYBA4P53673 196 aa11.35□□□□□ -0.59
COL6A2-201ENST00000300527 ZMAT4Q9H898 229 aa11.35□□□□□ -0.59
COL6A2-201ENST00000300527 IGKV3-7A0A075B6H7 116 aa11.35□□□□□ -0.59
COL6A2-201ENST00000300527 ZNF815PA8K554 130 aa11.35□□□□□ -0.59
COL6A2-201ENST00000300527 IGFL2Q6UWQ7 119 aa11.35□□□□□ -0.59
COL6A2-201ENST00000300527 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
COL6A2-201ENST00000300527 IGKV3D-20A0A0C4DH25 116 aa11.34□□□□□ -0.59
COL6A2-201ENST00000300527 H7C2G1 150 aa11.34□□□□□ -0.59
COL6A2-201ENST00000300527 KLHL30-AS1Q8NEE0 82 aa11.34□□□□□ -0.59
COL6A2-201ENST00000300527 SMPXQ9UHP9 88 aa11.34□□□□□ -0.59
COL6A2-201ENST00000300527 A0A087WX48 190 aa11.34□□□□□ -0.59
COL6A2-201ENST00000300527 MT-ATP8P03928 68 aa11.34□□□□□ -0.59
COL6A2-201ENST00000300527 SVEP1Q4LDE5 3571 aa11.34□□□□□ -0.59
COL6A2-201ENST00000300527 SCGB1C2P0DMR2 95 aa11.34□□□□□ -0.59
COL6A2-201ENST00000300527 MYMXA0A1B0GTQ4 84 aa11.33□□□□□ -0.6
COL6A2-201ENST00000300527 S100A4P26447 101 aaKnown RBP11.33□□□□□ -0.6
COL6A2-201ENST00000300527 C3orf36Q3SXR2 165 aa11.33□□□□□ -0.6
COL6A2-201ENST00000300527 DPM3Q9P2X0 92 aa11.33□□□□□ -0.6
COL6A2-201ENST00000300527 SCGB1A1P11684 91 aa11.33□□□□□ -0.6
COL6A2-201ENST00000300527 TMEM78Q5T7P6 136 aa11.33□□□□□ -0.6
COL6A2-201ENST00000300527 LINC01548A6NM66 108 aa11.33□□□□□ -0.6
COL6A2-201ENST00000300527 IGHG4P01861 327 aa11.33□□□□□ -0.6
COL6A2-201ENST00000300527 SLC25A16P16260 332 aa11.33□□□□□ -0.6
COL6A2-201ENST00000300527 SRSF1Q07955 248 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL6A2-201ENST00000300527 C5orf64Q2M2E5 130 aa11.33□□□□□ -0.6
COL6A2-201ENST00000300527 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
COL6A2-201ENST00000300527 PRADC1Q9BSG0 188 aa11.33□□□□□ -0.6
COL6A2-201ENST00000300527 ANKHD1Q8IWZ3 2542 aaKnown RBP11.32□□□□□ -0.6
COL6A2-201ENST00000300527 SPATA25Q9BR10 227 aa11.32□□□□□ -0.6
COL6A2-201ENST00000300527 AGPAT4-IT1Q9H0P7 198 aa11.32□□□□□ -0.6
COL6A2-201ENST00000300527 COLQQ9Y215 455 aaPredicted RBP11.32□□□□□ -0.6
COL6A2-201ENST00000300527 TNFRSF13BO14836 293 aaPredicted RBP11.32□□□□□ -0.6
COL6A2-201ENST00000300527 DEFB1P60022 68 aa11.32□□□□□ -0.6
COL6A2-201ENST00000300527 FAM57AQ8TBR7 257 aa11.32□□□□□ -0.6
COL6A2-201ENST00000300527 H7C1H1 209 aa11.32□□□□□ -0.6
COL6A2-201ENST00000300527 CLEC3BP05452 202 aa11.32□□□□□ -0.6
COL6A2-201ENST00000300527 LINC01560Q8TB33 94 aa11.32□□□□□ -0.6
COL6A2-201ENST00000300527 PLEKHB2Q96CS7 222 aa11.32□□□□□ -0.6
COL6A2-201ENST00000300527 RPL39LQ96EH5 51 aaKnown RBP11.32□□□□□ -0.6
COL6A2-201ENST00000300527 ZFHX2Q9C0A1 2572 aaPredicted RBP11.31□□□□□ -0.6
COL6A2-201ENST00000300527 F8W735 103 aaPredicted RBP11.31□□□□□ -0.6
COL6A2-201ENST00000300527 CTSGP08311 255 aa11.31□□□□□ -0.6
COL6A2-201ENST00000300527 PLNP26678 52 aa11.31□□□□□ -0.6
COL6A2-201ENST00000300527 FOXI1Q12951 378 aa11.31□□□□□ -0.6
COL6A2-201ENST00000300527 MRAP2Q96G30 205 aa11.31□□□□□ -0.6
COL6A2-201ENST00000300527 IGLV11-55A0A075B6I3 123 aa11.31□□□□□ -0.6
COL6A2-201ENST00000300527 SHISA9B4DS77 424 aa11.31□□□□□ -0.6
COL6A2-201ENST00000300527 CLEC19AQ6UXS0 136 aa11.31□□□□□ -0.6
COL6A2-201ENST00000300527 C8orf86Q6ZUL3 223 aa11.31□□□□□ -0.6
COL6A2-201ENST00000300527 ZNF575Q86XF7 245 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 699 ms