RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 USMG5Q96IX5 58 aa10.46□□□□□ -0.74
CDH8-201ENST00000299345 NPFFR1Q9GZQ6 430 aa10.46□□□□□ -0.74
CDH8-201ENST00000299345 VAMP3Q15836 100 aa10.45□□□□□ -0.74
CDH8-201ENST00000299345 TP73-AS1Q9UF72 201 aa10.45□□□□□ -0.74
CDH8-201ENST00000299345 A0A0G2JLM5 398 aa10.45□□□□□ -0.74
CDH8-201ENST00000299345 SRSF2Q01130 221 aaKnown RBP10.45□□□□□ -0.74
CDH8-201ENST00000299345 NXT2Q9NPJ8 142 aaKnown RBP10.45□□□□□ -0.74
CDH8-201ENST00000299345 U3KQK5 164 aa10.45□□□□□ -0.74
CDH8-201ENST00000299345 TNFRSF6BO95407 300 aa10.45□□□□□ -0.74
CDH8-201ENST00000299345 LEPP41159 167 aa10.45□□□□□ -0.74
CDH8-201ENST00000299345 OR4X2Q8NGF9 303 aa10.45□□□□□ -0.74
CDH8-201ENST00000299345 TRAV8-2A0A0B4J237 113 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 NDUFA4O00483 81 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 BLCAPP62952 87 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 ATP6V0BQ99437 205 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 TRBV12-3P01733 135 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 GAGE1Q13065 139 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 FOXE3Q13461 319 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 MEGF9Q9H1U4 602 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 SELENOKQ9Y6D0 94 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 CREBBPQ92793 2442 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 IGKV3D-20A0A0C4DH25 116 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 H3BVH4 76 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 UNQ9165/PRO28630Q6UXU0 137 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 LCNL1Q6ZST4 164 aa10.44□□□□□ -0.74
CDH8-201ENST00000299345 B4DSR2 109 aa10.43□□□□□ -0.74
CDH8-201ENST00000299345 PIFOQ8TCI5 191 aa10.43□□□□□ -0.74
CDH8-201ENST00000299345 OVOL1O14753 267 aa10.43□□□□□ -0.74
CDH8-201ENST00000299345 C9orf47Q6ZRZ4 202 aa10.43□□□□□ -0.74
CDH8-201ENST00000299345 Q6ZVH6 145 aa10.43□□□□□ -0.74
CDH8-201ENST00000299345 GLMPQ8WWB7 406 aa10.43□□□□□ -0.74
CDH8-201ENST00000299345 LINC00477Q96M19 166 aa10.43□□□□□ -0.74
CDH8-201ENST00000299345 KLK15Q9H2R5 256 aa10.43□□□□□ -0.74
CDH8-201ENST00000299345 M0R381 172 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 NMUP48645 174 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 KLK9Q2XQG4 91 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 SCRT2Q9NQ03 307 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 PPP1R14DQ9NXH3 145 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 KLK9Q9UKQ9 250 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 SMAD7O15105 426 aaKnown RBP10.42□□□□□ -0.74
CDH8-201ENST00000299345 IGHG2P01859 326 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 GATA1P15976 413 aaPredicted RBP10.42□□□□□ -0.74
CDH8-201ENST00000299345 LGALS9BQ3B8N2 356 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 TM4SF20Q53R12 229 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 LGALS9CQ6DKI2 356 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 U3KQE9 123 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 MYO18BQ8IUG5 2567 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 TRAV21A0A0B4J279 112 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 IGF1P05019 195 aa10.42□□□□□ -0.74
CDH8-201ENST00000299345 CBY3A6NI87 242 aa10.41□□□□□ -0.74
CDH8-201ENST00000299345 ORAOV1Q8WV07 137 aa10.41□□□□□ -0.74
CDH8-201ENST00000299345 RHPN1-AS1Q9BWJ2 59 aa10.41□□□□□ -0.74
CDH8-201ENST00000299345 C11orf21Q9P2W6 132 aa10.41□□□□□ -0.74
CDH8-201ENST00000299345 PHLDA3Q9Y5J5 127 aa10.41□□□□□ -0.74
CDH8-201ENST00000299345 COX11Q9Y6N1 276 aa10.41□□□□□ -0.74
CDH8-201ENST00000299345 COX8AP10176 69 aa10.41□□□□□ -0.74
CDH8-201ENST00000299345 OR2K2Q8NGT1 345 aa10.41□□□□□ -0.74
CDH8-201ENST00000299345 ASH1LQ9NR48 2969 aaKnown RBP10.41□□□□□ -0.74
CDH8-201ENST00000299345 SRD5A1P18405 259 aa10.41□□□□□ -0.74
CDH8-201ENST00000299345 RNF185Q96GF1 192 aa10.41□□□□□ -0.74
CDH8-201ENST00000299345 AP1S3Q96PC3 154 aa10.41□□□□□ -0.74
CDH8-201ENST00000299345 A6NDX4 124 aa10.4□□□□□ -0.74
CDH8-201ENST00000299345 H3BUA1 57 aa10.4□□□□□ -0.74
CDH8-201ENST00000299345 RNASE4P34096 147 aaKnown RBP10.4□□□□□ -0.74
CDH8-201ENST00000299345 MYOZ3Q8TDC0 251 aa10.4□□□□□ -0.74
CDH8-201ENST00000299345 CNFNQ9BYD5 112 aa10.4□□□□□ -0.74
CDH8-201ENST00000299345 A0A096LNJ9 63 aa10.4□□□□□ -0.74
CDH8-201ENST00000299345 FCER1GP30273 86 aa10.4□□□□□ -0.74
CDH8-201ENST00000299345 USP9YO00507 2555 aaPredicted RBP10.4□□□□□ -0.74
CDH8-201ENST00000299345 ASIPP42127 132 aa10.4□□□□□ -0.75
CDH8-201ENST00000299345 ERASQ7Z444 233 aa10.4□□□□□ -0.75
CDH8-201ENST00000299345 TMEM158Q8WZ71 300 aa10.39□□□□□ -0.75
CDH8-201ENST00000299345 LENEPQ9Y5L5 61 aa10.39□□□□□ -0.75
CDH8-201ENST00000299345 TRAV26-2A0A0B4J265 109 aa10.39□□□□□ -0.75
CDH8-201ENST00000299345 GAS8-AS1O95177 125 aa10.39□□□□□ -0.75
CDH8-201ENST00000299345 DEFB1P60022 68 aa10.39□□□□□ -0.75
CDH8-201ENST00000299345 NRGNQ92686 78 aa10.39□□□□□ -0.75
CDH8-201ENST00000299345 DAZ1Q9NQZ3 744 aaKnown RBP10.39□□□□□ -0.75
CDH8-201ENST00000299345 DOPEY1Q5JWR5 2465 aa10.39□□□□□ -0.75
CDH8-201ENST00000299345 MGPP08493 103 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 ID1P41134 155 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 CRIP2P52943 208 aaPredicted RBP10.38□□□□□ -0.75
CDH8-201ENST00000299345 ANKRD39Q53RE8 183 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 BVES-AS1Q5T3Y7 98 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 OR4C5Q8NGB2 326 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 C20orf173Q96LM9 149 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 FOXC2Q99958 501 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 NOTCH3Q9UM47 2321 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 MAP1AP78559 2803 aaPredicted RBP10.38□□□□□ -0.75
CDH8-201ENST00000299345 F6UB75 175 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 TGFAP01135 160 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 FOSL1P15407 271 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 DSCR9P59020 149 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 Q8N8P6 123 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 OR1N2Q8NGR9 330 aa10.38□□□□□ -0.75
CDH8-201ENST00000299345 C7orf71A4D174 169 aa10.37□□□□□ -0.75
CDH8-201ENST00000299345 Q6ZQT7 251 aa10.37□□□□□ -0.75
CDH8-201ENST00000299345 A1L4Q6 167 aa10.37□□□□□ -0.75
CDH8-201ENST00000299345 ATP5LO75964 103 aa10.37□□□□□ -0.75
CDH8-201ENST00000299345 Q6ZS46 218 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms