RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TSTD3H0UI37 97 aa22.48■■□□□ 1.19
PABPN1-201ENST00000216727 FAM19A2Q8N3H0 131 aa22.48■■□□□ 1.19
PABPN1-201ENST00000216727 TMEM213A2RRL7 107 aa22.47■■□□□ 1.19
PABPN1-201ENST00000216727 RNASEKQ6P5S7 137 aaKnown RBP22.47■■□□□ 1.19
PABPN1-201ENST00000216727 REC114Q7Z4M0 266 aa22.47■■□□□ 1.19
PABPN1-201ENST00000216727 CHCHD1Q96BP2 118 aaKnown RBP22.47■■□□□ 1.19
PABPN1-201ENST00000216727 ZNF469Q96JG9 3925 aaPredicted RBP22.47■■□□□ 1.19
PABPN1-201ENST00000216727 IGKV3D-20A0A0C4DH25 116 aa22.47■■□□□ 1.19
PABPN1-201ENST00000216727 ZNF664Q8N3J9 261 aa22.47■■□□□ 1.19
PABPN1-201ENST00000216727 LGALS9O00182 355 aa22.45■■□□□ 1.18
PABPN1-201ENST00000216727 ZNF705DP0CH99 300 aaPredicted RBP22.45■■□□□ 1.18
PABPN1-201ENST00000216727 ZNF705BP0CI00 300 aaPredicted RBP22.45■■□□□ 1.18
PABPN1-201ENST00000216727 NTF3P20783 257 aa22.45■■□□□ 1.18
PABPN1-201ENST00000216727 EDN2P20800 178 aa22.45■■□□□ 1.18
PABPN1-201ENST00000216727 C11orf21Q9P2W6 132 aa22.45■■□□□ 1.18
PABPN1-201ENST00000216727 FAM104BQ5XKR9 115 aa22.45■■□□□ 1.18
PABPN1-201ENST00000216727 RNF114Q9Y508 228 aa22.45■■□□□ 1.18
PABPN1-201ENST00000216727 HELZ2Q9BYK8 2649 aaKnown RBP22.44■■□□□ 1.18
PABPN1-201ENST00000216727 DUX5Q96PT3 197 aa22.44■■□□□ 1.18
PABPN1-201ENST00000216727 IGKV3-7A0A075B6H7 116 aa22.43■■□□□ 1.18
PABPN1-201ENST00000216727 FAM181BA6NEQ2 426 aa22.43■■□□□ 1.18
PABPN1-201ENST00000216727 TWIST1Q15672 202 aa22.43■■□□□ 1.18
PABPN1-201ENST00000216727 OR8A1Q8NGG7 326 aa22.43■■□□□ 1.18
PABPN1-201ENST00000216727 DCANP1Q8TF63 244 aa22.43■■□□□ 1.18
PABPN1-201ENST00000216727 TRBV7-9A0A0J9YWB2 115 aa22.42■■□□□ 1.18
PABPN1-201ENST00000216727 PRO1933Q9H354 126 aa22.42■■□□□ 1.18
PABPN1-201ENST00000216727 IGHV4OR15-8A0A075B7B6 117 aa22.41■■□□□ 1.18
PABPN1-201ENST00000216727 A0A087WW49 117 aa22.41■■□□□ 1.18
PABPN1-201ENST00000216727 M0R2Z0 102 aa22.41■■□□□ 1.18
PABPN1-201ENST00000216727 ID1P41134 155 aa22.41■■□□□ 1.18
PABPN1-201ENST00000216727 KRTDAPP60985 99 aa22.41■■□□□ 1.18
PABPN1-201ENST00000216727 ZFAND2AQ8N6M9 145 aa22.41■■□□□ 1.18
PABPN1-201ENST00000216727 FAM19A4Q96LR4 140 aa22.41■■□□□ 1.18
PABPN1-201ENST00000216727 FOXC2Q99958 501 aa22.41■■□□□ 1.18
PABPN1-201ENST00000216727 U3KQK5 164 aa22.41■■□□□ 1.18
PABPN1-201ENST00000216727 CCDC168Q8NDH2 2452 aa22.41■■□□□ 1.18
PABPN1-201ENST00000216727 LINC00614P0C842 121 aa22.41■■□□□ 1.18
PABPN1-201ENST00000216727 MUC21A0A0G2JKD1 596 aa22.4■■□□□ 1.18
PABPN1-201ENST00000216727 MUC21A0A140T8X8 626 aa22.4■■□□□ 1.18
PABPN1-201ENST00000216727 MUC21Q5SSG8 566 aa22.4■■□□□ 1.18
PABPN1-201ENST00000216727 TEX43Q6ZNM6 134 aa22.4■■□□□ 1.18
PABPN1-201ENST00000216727 TMEM191AQ9H0A3 160 aa22.4■■□□□ 1.18
PABPN1-201ENST00000216727 PDZD2O15018 2839 aa22.4■■□□□ 1.18
PABPN1-201ENST00000216727 SSTP61278 116 aa22.4■■□□□ 1.18
PABPN1-201ENST00000216727 PRR9Q5T870 116 aa22.4■■□□□ 1.18
PABPN1-201ENST00000216727 TLN2Q9Y4G6 2542 aa22.4■■□□□ 1.18
PABPN1-201ENST00000216727 M0QZ24 198 aa22.39■■□□□ 1.17
PABPN1-201ENST00000216727 SYNJ2BPP57105 145 aa22.39■■□□□ 1.17
PABPN1-201ENST00000216727 AMN1Q8IY45 258 aa22.39■■□□□ 1.17
PABPN1-201ENST00000216727 SRD5A1P18405 259 aa22.38■■□□□ 1.17
PABPN1-201ENST00000216727 HOXD3P31249 432 aaPredicted RBP22.38■■□□□ 1.17
PABPN1-201ENST00000216727 KLHDC1Q8N7A1 406 aa22.38■■□□□ 1.17
PABPN1-201ENST00000216727 Q8N976 141 aa22.38■■□□□ 1.17
PABPN1-201ENST00000216727 C3orf79P0CE67 100 aa22.38■■□□□ 1.17
PABPN1-201ENST00000216727 APRG1Q8IVJ8 170 aa22.38■■□□□ 1.17
PABPN1-201ENST00000216727 FLNAP21333 2647 aaKnown RBP22.37■■□□□ 1.17
PABPN1-201ENST00000216727 DEFB1P60022 68 aa22.37■■□□□ 1.17
PABPN1-201ENST00000216727 DDTP30046 118 aa22.36■■□□□ 1.17
PABPN1-201ENST00000216727 F6UB75 175 aa22.36■■□□□ 1.17
PABPN1-201ENST00000216727 KRTAP1-1Q07627 177 aa22.36■■□□□ 1.17
PABPN1-201ENST00000216727 MRPL51Q4U2R6 128 aaKnown RBP22.36■■□□□ 1.17
PABPN1-201ENST00000216727 ORMDL3Q8N138 153 aa22.36■■□□□ 1.17
PABPN1-201ENST00000216727 MS4A6AQ9H2W1 248 aa22.36■■□□□ 1.17
PABPN1-201ENST00000216727 SELENOKQ9Y6D0 94 aa22.36■■□□□ 1.17
PABPN1-201ENST00000216727 TRAV21A0A0B4J279 112 aa22.35■■□□□ 1.17
PABPN1-201ENST00000216727 D6R8Y8 96 aa22.35■■□□□ 1.17
PABPN1-201ENST00000216727 RAB4AP20338 218 aa22.35■■□□□ 1.17
PABPN1-201ENST00000216727 Q6ZQT7 251 aa22.35■■□□□ 1.17
PABPN1-201ENST00000216727 MSRB1Q9NZV6 116 aa22.35■■□□□ 1.17
PABPN1-201ENST00000216727 IGHV1-24A0A0C4DH33 117 aa22.34■■□□□ 1.17
PABPN1-201ENST00000216727 CD5LO43866 347 aa22.34■■□□□ 1.17
PABPN1-201ENST00000216727 OR5AL1P0C617 328 aa22.34■■□□□ 1.17
PABPN1-201ENST00000216727 PRELID3AQ96N28 172 aa22.33■■□□□ 1.16
PABPN1-201ENST00000216727 KIR2DL5BA0A0G2JN68 375 aa22.32■■□□□ 1.16
PABPN1-201ENST00000216727 KIR2DL5BA0A0G2JPC4 375 aa22.32■■□□□ 1.16
PABPN1-201ENST00000216727 C2orf70A6NJV1 201 aa22.32■■□□□ 1.16
PABPN1-201ENST00000216727 SNAI2O43623 268 aa22.32■■□□□ 1.16
PABPN1-201ENST00000216727 KIR2DL5AQ8N109 375 aa22.32■■□□□ 1.16
PABPN1-201ENST00000216727 DNAJC9-AS1A6NH13 148 aa22.31■■□□□ 1.16
PABPN1-201ENST00000216727 WFDC3Q8IUB2 231 aa22.31■■□□□ 1.16
PABPN1-201ENST00000216727 MYO9AB2RTY4 2548 aa22.31■■□□□ 1.16
PABPN1-201ENST00000216727 IGHV4-4A0A075B6R2 117 aa22.31■■□□□ 1.16
PABPN1-201ENST00000216727 CSN3P07498 182 aa22.31■■□□□ 1.16
PABPN1-201ENST00000216727 EBLN2Q6P2I7 272 aa22.31■■□□□ 1.16
PABPN1-201ENST00000216727 K7EQG2 157 aa22.3■■□□□ 1.16
PABPN1-201ENST00000216727 Q6ZSV7 163 aa22.3■■□□□ 1.16
PABPN1-201ENST00000216727 RNF185Q96GF1 192 aa22.3■■□□□ 1.16
PABPN1-201ENST00000216727 C4orf3Q8WVX3 66 aa22.3■■□□□ 1.16
PABPN1-201ENST00000216727 AP5S1Q9NUS5 200 aa22.3■■□□□ 1.16
PABPN1-201ENST00000216727 PPBPP02775 128 aa22.29■■□□□ 1.16
PABPN1-201ENST00000216727 BTF3P20290 206 aaKnown RBP22.29■■□□□ 1.16
PABPN1-201ENST00000216727 CKS2P33552 79 aa22.29■■□□□ 1.16
PABPN1-201ENST00000216727 SNRPD3P62318 126 aaKnown RBP22.29■■□□□ 1.16
PABPN1-201ENST00000216727 PMCHL1Q16048 86 aa22.29■■□□□ 1.16
PABPN1-201ENST00000216727 UNC79Q9P2D8 2635 aa22.29■■□□□ 1.16
PABPN1-201ENST00000216727 J3KRW8 73 aa22.28■■□□□ 1.16
PABPN1-201ENST00000216727 CACNG7P62955 275 aa22.28■■□□□ 1.16
PABPN1-201ENST00000216727 TDRG1Q3Y452 100 aa22.28■■□□□ 1.16
PABPN1-201ENST00000216727 TCTEX1D4Q5JR98 221 aa22.28■■□□□ 1.16
PABPN1-201ENST00000216727 OR10AG1Q8NH19 301 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms