RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 NBEAP1P0C6P0 100 aa5.37□□□□□ -1.55
PHGDH-225ENST00000641720 CMC4P56277 68 aaPredicted RBP5.37□□□□□ -1.55
PHGDH-225ENST00000641720 EIF5AP63241 154 aaKnown RBP5.37□□□□□ -1.55
PHGDH-225ENST00000641720 PDE6HQ13956 83 aa5.37□□□□□ -1.55
PHGDH-225ENST00000641720 PSG3Q16557 428 aa5.37□□□□□ -1.55
PHGDH-225ENST00000641720 TOR2AQ5JU69 321 aa5.37□□□□□ -1.55
PHGDH-225ENST00000641720 PQLC2Q6ZP29 291 aa5.37□□□□□ -1.55
PHGDH-225ENST00000641720 LRRC20Q8TCA0 184 aa5.37□□□□□ -1.55
PHGDH-225ENST00000641720 RPUSD4Q96CM3 377 aaKnown RBP5.37□□□□□ -1.55
PHGDH-225ENST00000641720 TMPRSS5Q9H3S3 457 aa5.37□□□□□ -1.55
PHGDH-225ENST00000641720 SAV1Q9H4B6 383 aaPredicted RBP5.37□□□□□ -1.55
PHGDH-225ENST00000641720 TP53TG1Q9Y2A0 90 aa5.37□□□□□ -1.55
PHGDH-225ENST00000641720 IGKV2-40A0A087WW87 121 aaPredicted RBP5.36□□□□□ -1.55
PHGDH-225ENST00000641720 A0A1B0GV50 99 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 A8MTW9 85 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 GGTLC3B5MD39 225 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 UMAD1C9J7I0 102 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 CXorf1O96002 111 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 IGKV2D-40P01614 121 aaPredicted RBP5.36□□□□□ -1.55
PHGDH-225ENST00000641720 SULT1A2P50226 295 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 CNN1P51911 297 aaKnown RBP5.36□□□□□ -1.55
PHGDH-225ENST00000641720 RANP62826 216 aaKnown RBP5.36□□□□□ -1.55
PHGDH-225ENST00000641720 PSG9Q00887 426 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 HIST1H1AQ02539 215 aaPredicted RBP5.36□□□□□ -1.55
PHGDH-225ENST00000641720 ICAM4Q14773 271 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 AMTNQ6UX39 209 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 ALKAL2Q6UX46 152 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 STHQ8IWL8 128 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 OR8A1Q8NGG7 326 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 PHLDA1Q8WV24 401 aaPredicted RBP5.36□□□□□ -1.55
PHGDH-225ENST00000641720 SPXQ9BT56 116 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 Q9H3A6 140 aa5.36□□□□□ -1.55
PHGDH-225ENST00000641720 YTHDF2Q9Y5A9 579 aaKnown RBP5.36□□□□□ -1.55
PHGDH-225ENST00000641720 CA1P00915 261 aaPredicted RBP5.35□□□□□ -1.55
PHGDH-225ENST00000641720 APOC4P55056 127 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 FXYD7P58549 80 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 UBE2G2P60604 165 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 GNG5P63218 68 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 ERCC8Q13216 396 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 DEFB135Q30KP9 77 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 EBLN2Q6P2I7 272 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 DPPA3Q6W0C5 159 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 Q6ZWC4 215 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 OR4B1Q8NGF8 309 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 SFT2D1Q8WV19 159 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 MRPL53Q96EL3 112 aaKnown RBP5.35□□□□□ -1.55
PHGDH-225ENST00000641720 SLC35B3Q9H1N7 401 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 APLNQ9ULZ1 77 aa5.35□□□□□ -1.55
PHGDH-225ENST00000641720 KIR2DL5BA0A0G2JN68 375 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 KIR2DL5BA0A0G2JPC4 375 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 NPIPB6E9PJ23 425 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 M0R2Z0 102 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 TNFRSF6BO95407 300 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 CCL20P78556 96 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 EIF5AL1Q6IS14 154 aaKnown RBP5.34□□□□□ -1.55
PHGDH-225ENST00000641720 LINC00336Q6ZUF6 198 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 KIR2DL5AQ8N109 375 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 LYPD1Q8N2G4 141 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 KIR2DL5BQ8NHK3 375 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 Q8TAT8 98 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 MBD3L1Q8WWY6 194 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 RNF183Q96D59 192 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 VGLL1Q99990 258 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 CSTL1Q9H114 145 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 AAMDCQ9H7C9 122 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 OTORQ9NRC9 128 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 TMEM167BQ9NRX6 74 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 CLEC5AQ9NY25 188 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 XCL2Q9UBD3 114 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 RPH3ALQ9UNE2 315 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 PRELID1Q9Y255 219 aa5.34□□□□□ -1.55
PHGDH-225ENST00000641720 KLK5Q9Y337 293 aaPredicted RBP5.34□□□□□ -1.55
PHGDH-225ENST00000641720 FAM74A7A6NL05 159 aa5.33□□□□□ -1.56
PHGDH-225ENST00000641720 ZNF705EA8MWA4 302 aaPredicted RBP5.33□□□□□ -1.56
PHGDH-225ENST00000641720 DIRC3C9JPN6 131 aa5.33□□□□□ -1.56
PHGDH-225ENST00000641720 DUSP14O95147 198 aaKnown RBP5.33□□□□□ -1.56
PHGDH-225ENST00000641720 H2AFB1P0C5Y9 115 aa5.33□□□□□ -1.56
PHGDH-225ENST00000641720 CT45A10P0DMU9 189 aa5.33□□□□□ -1.56
PHGDH-225ENST00000641720 RAB5CP51148 216 aa5.33□□□□□ -1.56
PHGDH-225ENST00000641720 KIR3DS1Q14943 382 aa5.33□□□□□ -1.56
PHGDH-225ENST00000641720 SPINK13Q1W4C9 94 aa5.33□□□□□ -1.56
PHGDH-225ENST00000641720 MORN3Q6PF18 240 aaPredicted RBP5.33□□□□□ -1.56
PHGDH-225ENST00000641720 ZNF575Q86XF7 245 aa5.33□□□□□ -1.56
PHGDH-225ENST00000641720 CSNK1G2-AS1Q8NCQ2 148 aa5.33□□□□□ -1.56
PHGDH-225ENST00000641720 OR10J6PQ8NGY7 276 aa5.33□□□□□ -1.56
PHGDH-225ENST00000641720 FLG2Q5D862 2391 aaPredicted RBP5.32□□□□□ -1.56
PHGDH-225ENST00000641720 TRAV12-2A0A075B6T6 113 aa5.32□□□□□ -1.56
PHGDH-225ENST00000641720 TRAV8-1A0A0A6YYK1 113 aa5.32□□□□□ -1.56
PHGDH-225ENST00000641720 TRAV1-1A0A0B4J248 108 aa5.32□□□□□ -1.56
PHGDH-225ENST00000641720 PGPA6NDG6 321 aa5.32□□□□□ -1.56
PHGDH-225ENST00000641720 CRXO43186 299 aaPredicted RBP5.32□□□□□ -1.56
PHGDH-225ENST00000641720 SPRY2O43597 315 aa5.32□□□□□ -1.56
PHGDH-225ENST00000641720 SLC25A5P05141 298 aaKnown RBP5.32□□□□□ -1.56
PHGDH-225ENST00000641720 RBMY1A1P0DJD3 496 aaKnown RBP5.32□□□□□ -1.56
PHGDH-225ENST00000641720 RBMY1CP0DJD4 496 aa5.32□□□□□ -1.56
PHGDH-225ENST00000641720 ATP5G3P48201 142 aa5.32□□□□□ -1.56
PHGDH-225ENST00000641720 RBMY1FQ15415 496 aaKnown RBP5.32□□□□□ -1.56
PHGDH-225ENST00000641720 PRR9Q5T870 116 aa5.32□□□□□ -1.56
PHGDH-225ENST00000641720 GOLT1AQ6ZVE7 132 aa5.32□□□□□ -1.56
PHGDH-225ENST00000641720 C5orf17Q8NAS9 161 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms