RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ATP6V0E1O15342 81 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 GCGP01275 180 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 CRYGCP07315 174 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 ERHP84090 104 aaKnown RBP3.67□□□□□ -1.82
LINC00550-201ENST00000629293 TEX45Q8NA69 505 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 MRPL36Q9P0J6 103 aaKnown RBP3.67□□□□□ -1.82
LINC00550-201ENST00000629293 TRAPPC1Q9Y5R8 145 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 LCE6AA0A183 80 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 IGLC7A0M8Q6 106 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 RD3LP0DJH9 198 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 ESDP10768 282 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 GP9P14770 177 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 CRYBB3P26998 211 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 PATE2Q6UY27 113 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 NEXN-AS1Q8NBZ9 246 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 DAZAP1Q96EP5 407 aaKnown RBP3.67□□□□□ -1.82
LINC00550-201ENST00000629293 OSTCQ9NRP0 149 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 TP53TG3Q9ULZ0 132 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 DYNC2H1Q8NCM8 4307 aaKnown RBP3.67□□□□□ -1.82
LINC00550-201ENST00000629293 SLC17A3O00476 420 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 ISLRO14498 428 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 OR7C2O60412 319 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 IGHG4P01861 327 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 GNG4P50150 75 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 VMA21Q3ZAQ7 101 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 TMEM18Q96B42 140 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 SPXQ9BT56 116 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 SELENOKQ9Y6D0 94 aa3.67□□□□□ -1.82
LINC00550-201ENST00000629293 STARD9Q9P2P6 4700 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 TRBV9A0A0B4J1U6 114 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 TRAV41A0A0B4J266 112 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 HELTA6NFD8 242 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 IGHV4-30-4P0DP06 118 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 PSMB8P28062 276 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 LGALS7P47929 136 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 RAB9AP51151 201 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 MFAP2P55001 183 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 RAB4BP61018 213 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 OR5I1Q13606 314 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 RPEL1Q2QD12 228 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 MMD2Q8IY49 270 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 TMEM256Q8N2U0 113 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 Q8N3U1 123 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 FXYD5Q96DB9 178 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 C14orf144Q96I85 54 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 MAP6D1Q9H9H5 199 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 DNAJC4Q9NNZ3 241 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 IGHV4OR15-8A0A075B7B6 117 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 A0A087WW49 117 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 TRAV5A0A0B4J249 113 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 SMIM27A0A1W2PRY6 76 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 NUPR1O60356 82 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 APELAP0DMC3 54 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 CBLN1P23435 193 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 DDTP30046 118 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 INSL3P51460 131 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 SUB1P53999 127 aaKnown RBP eCLIP3.66□□□□□ -1.82
LINC00550-201ENST00000629293 TPPP2P59282 170 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 TAS2R60P59551 318 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 UBE2L3P68036 154 aaKnown RBP3.66□□□□□ -1.82
LINC00550-201ENST00000629293 CX3CL1P78423 397 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 ZNF90Q03938 601 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 OR1L4Q8NGR5 311 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 GNB1LQ9BYB4 327 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 FBXL15Q9H469 300 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 RETNQ9HD89 108 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 DNAH7Q8WXX0 4024 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 LINC01619G3V211 115 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 TSTD3H0UI37 97 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 COX7A2P2O60397 106 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 ERVFC1-1P60608 527 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 Q0VG73 95 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 C10orf113Q5VZT2 155 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 ZNF491Q8N8L2 437 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 OR1L6Q8NGR2 347 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 UBE2E2Q96LR5 201 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 TRGV9Q99603 122 aa3.66□□□□□ -1.82
LINC00550-201ENST00000629293 PYYP10082 97 aa3.65□□□□□ -1.82
LINC00550-201ENST00000629293 PLP1P60201 277 aa3.65□□□□□ -1.82
LINC00550-201ENST00000629293 NDPQ00604 133 aa3.65□□□□□ -1.82
LINC00550-201ENST00000629293 ZNF124Q15973 351 aa3.65□□□□□ -1.82
LINC00550-201ENST00000629293 TIGITQ495A1 244 aa3.65□□□□□ -1.82
LINC00550-201ENST00000629293 UNQ5815/PRO19632Q6UWF5 114 aa3.65□□□□□ -1.82
LINC00550-201ENST00000629293 TMEM136Q6ZRR5 245 aa3.65□□□□□ -1.82
LINC00550-201ENST00000629293 FAM231DQ6ZW35 169 aa3.65□□□□□ -1.82
LINC00550-201ENST00000629293 ZNF664Q8N3J9 261 aa3.65□□□□□ -1.82
LINC00550-201ENST00000629293 RNASE7Q9H1E1 156 aaKnown RBP3.65□□□□□ -1.82
LINC00550-201ENST00000629293 A8MWP6 167 aa3.65□□□□□ -1.83
LINC00550-201ENST00000629293 MT-ND6P03923 174 aa3.65□□□□□ -1.83
LINC00550-201ENST00000629293 COX19Q49B96 90 aa3.65□□□□□ -1.83
LINC00550-201ENST00000629293 IGFL4Q6B9Z1 124 aa3.65□□□□□ -1.83
LINC00550-201ENST00000629293 ETFRF1Q6IPR1 90 aa3.65□□□□□ -1.83
LINC00550-201ENST00000629293 OR8I2Q8N0Y5 310 aa3.65□□□□□ -1.83
LINC00550-201ENST00000629293 Q8N6K4 173 aa3.65□□□□□ -1.83
LINC00550-201ENST00000629293 PAXXQ9BUH6 204 aa3.65□□□□□ -1.83
LINC00550-201ENST00000629293 PRO1933Q9H354 126 aa3.65□□□□□ -1.83
LINC00550-201ENST00000629293 IGHV7-81A0A0B4J1V7 117 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 KIR2DL5BA0A0G2JN68 375 aa3.64□□□□□ -1.83
LINC00550-201ENST00000629293 KIR2DL5BA0A0G2JPC4 375 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms