RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 PRM2P04554 102 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 CD200P41217 278 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 PIGPP57054 158 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 TPI1P60174 286 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 SURF2Q15527 256 aaPredicted RBP1.78□□□□□ -2.12
VPS8-228ENST00000628962 AADACL3Q5VUY0 350 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 CNEP1R1Q8N9A8 125 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 OR10P1Q8NGE3 313 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 CLDND2Q8NHS1 167 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 MUC7Q8TAX7 377 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 DEDD2Q8WXF8 326 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 H1FXQ92522 213 aaKnown RBP1.78□□□□□ -2.12
VPS8-228ENST00000628962 OR8B2Q96RD0 313 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 EFCAB11Q9BUY7 163 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 HIGD2AQ9BW72 106 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 IL36BQ9NZH7 164 aa1.78□□□□□ -2.12
VPS8-228ENST00000628962 MCTS1Q9ULC4 181 aaKnown RBP1.78□□□□□ -2.12
VPS8-228ENST00000628962 AMMECR1Q9Y4X0 333 aaPredicted RBP1.78□□□□□ -2.12
VPS8-228ENST00000628962 AKAP6Q13023 2319 aa1.78□□□□□ -2.13
VPS8-228ENST00000628962 SEC16AO15027 2179 aa1.78□□□□□ -2.13
VPS8-228ENST00000628962 USF3Q68DE3 2245 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 HERC1Q15751 4861 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 IGKV1D-43A0A0B4J1Z2 117 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 TRAV17A0A0B4J275 112 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 A0A1B0GU33 70 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 C19orf71A6NCJ1 209 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 CLDN25C9JDP6 229 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 KPNA4O00629 521 aaPredicted RBP1.77□□□□□ -2.13
VPS8-228ENST00000628962 UBFD1O14562 309 aaKnown RBP1.77□□□□□ -2.13
VPS8-228ENST00000628962 ARPC5O15511 151 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 PSCAO43653 123 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 BANF1O75531 89 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 SOD1P00441 154 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 NPYP01303 97 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 CSN2P05814 226 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 OR10J4P0C629 311 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 ZNF22P17026 224 aaPredicted RBP1.77□□□□□ -2.13
VPS8-228ENST00000628962 GTF2A1P52655 376 aaPredicted RBP1.77□□□□□ -2.13
VPS8-228ENST00000628962 FXYD7P58549 80 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 AP1S1P61966 158 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 HIST1H4AP62805 103 aaKnown RBP1.77□□□□□ -2.13
VPS8-228ENST00000628962 ZNF117Q03924 483 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 AKR1C1Q04828 323 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 DEFB134Q4QY38 66 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 PYDC2Q56P42 97 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 PRR9Q5T870 116 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 LYRM7Q5U5X0 104 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 IGFL1Q6UW32 110 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 CLVS1Q8IUQ0 354 aaPredicted RBP1.77□□□□□ -2.13
VPS8-228ENST00000628962 EXOC3-AS1Q8N2X6 119 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 Q8NAQ8 132 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 OR10D4PQ8NGN7 298 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 ZNF675Q8TD23 568 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 BORCS5Q969J3 196 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 DERL1Q9BUN8 251 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 CCDC32Q9BV29 185 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 TXNL4BQ9NX01 149 aaKnown RBP1.77□□□□□ -2.13
VPS8-228ENST00000628962 MARCOQ9UEW3 520 aaPredicted RBP1.77□□□□□ -2.13
VPS8-228ENST00000628962 TP73-AS1Q9UF72 201 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 HS3ST2Q9Y278 367 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 ERGIC3Q9Y282 383 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 HEY1Q9Y5J3 304 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 DSCAML1Q8TD84 2053 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 TRPM6Q9BX84 2022 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 COL7A1Q02388 2944 aa1.77□□□□□ -2.13
VPS8-228ENST00000628962 TRAV41A0A0B4J266 112 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 LCE6AA0A183 80 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 DUXBA0A1W2PPF3 345 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 TXNDC9O14530 226 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 LEPROTO15243 131 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 PIN1P1O15428 100 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 CPSF4O95639 269 aaKnown RBP1.76□□□□□ -2.13
VPS8-228ENST00000628962 CDS2O95674 445 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 CASP1P29466 404 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 ZNF80P51504 273 aaPredicted RBP1.76□□□□□ -2.13
VPS8-228ENST00000628962 EMP1P54849 157 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 RPL18Q07020 188 aaKnown RBP1.76□□□□□ -2.13
VPS8-228ENST00000628962 BAMBIQ13145 260 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 FAM229BQ4G0N7 80 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 KRTAP13-2Q52LG2 175 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 SPANXN3Q5MJ09 141 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 LCA10Q71F78 164 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 KTN1-AS1Q86SY8 53 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 DHFR2Q86XF0 187 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 MSRB3Q8IXL7 192 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 NUP35Q8NFH5 326 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 OR9Q1Q8NGQ5 310 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 SMCR5Q8TEV8 140 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 MBD3L1Q8WWY6 194 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 HSPB9Q9BQS6 159 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 TM2D3Q9BRN9 247 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 TTTY13Q9BZ97 58 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 AICDAQ9GZX7 198 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 C16orf95Q9H693 158 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 MRPL16Q9NX20 251 aaKnown RBP1.76□□□□□ -2.13
VPS8-228ENST00000628962 LAMTOR3Q9UHA4 124 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 OR52A1Q9UKL2 312 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 CSMD3Q7Z407 3707 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 CACNA1CQ13936 2221 aa1.76□□□□□ -2.13
VPS8-228ENST00000628962 LYSTQ99698 3801 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms