RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 LEPP41159 167 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 MFAP4P55083 255 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 ZNF672Q499Z4 452 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-211ENST00000622020 ZNF493Q6ZR52 646 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 C21orf62Q9NYP8 219 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 DPM3Q9P2X0 92 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 HRNRQ86YZ3 2850 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-211ENST00000622020 WI2-2373I1.2A0A1W2PRP0 233 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 K7ERJ3 54 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 SEC11AP67812 179 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 BOD1L2Q8IYS8 172 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 A6NDN8 102 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 F8W735 103 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-211ENST00000622020 Q6AWC8 147 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 LYPD1Q8N2G4 141 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 PTPRQQ9UMZ3 2332 aa12.29□□□□□ -0.44
NPHP4-211ENST00000622020 IGF2RP11717 2491 aa12.28□□□□□ -0.44
NPHP4-211ENST00000622020 LY6LH3BQJ8 138 aa12.28□□□□□ -0.44
NPHP4-211ENST00000622020 ZNF207O43670 478 aaKnown RBP12.28□□□□□ -0.44
NPHP4-211ENST00000622020 LGALS9BQ3B8N2 356 aa12.28□□□□□ -0.44
NPHP4-211ENST00000622020 LGALS9CQ6DKI2 356 aa12.28□□□□□ -0.44
NPHP4-211ENST00000622020 Q6ZQT7 251 aa12.28□□□□□ -0.44
NPHP4-211ENST00000622020 DYNAPQ8N1N2 210 aa12.28□□□□□ -0.44
NPHP4-211ENST00000622020 A0A1B0GW15 77 aa12.28□□□□□ -0.44
NPHP4-211ENST00000622020 C9orf118A6NHY6 69 aa12.28□□□□□ -0.44
NPHP4-211ENST00000622020 B9A039 149 aa12.28□□□□□ -0.44
NPHP4-211ENST00000622020 SPRY2O43597 315 aa12.28□□□□□ -0.44
NPHP4-211ENST00000622020 GTSCR1Q86UQ5 136 aa12.28□□□□□ -0.44
NPHP4-211ENST00000622020 MUC6Q6W4X9 2439 aa12.27□□□□□ -0.44
NPHP4-211ENST00000622020 TRAV26-2A0A0B4J265 109 aa12.27□□□□□ -0.44
NPHP4-211ENST00000622020 J3KRW8 73 aa12.27□□□□□ -0.44
NPHP4-211ENST00000622020 SMAD5-AS1Q9Y6J3 95 aa12.27□□□□□ -0.44
NPHP4-211ENST00000622020 C5orf64Q2M2E5 130 aa12.27□□□□□ -0.45
NPHP4-211ENST00000622020 OR1N2Q8NGR9 330 aa12.27□□□□□ -0.45
NPHP4-211ENST00000622020 OR2K2Q8NGT1 345 aa12.27□□□□□ -0.45
NPHP4-211ENST00000622020 ADAMTSL5Q6ZMM2 481 aa12.27□□□□□ -0.45
NPHP4-211ENST00000622020 GTF2H5Q6ZYL4 71 aa12.27□□□□□ -0.45
NPHP4-211ENST00000622020 ARPC1AQ92747 370 aa12.27□□□□□ -0.45
NPHP4-211ENST00000622020 TRBV6-1A0A0K0K1D8 114 aa12.26□□□□□ -0.45
NPHP4-211ENST00000622020 SPCS1Q9Y6A9 102 aa12.26□□□□□ -0.45
NPHP4-211ENST00000622020 FOXC2Q99958 501 aa12.26□□□□□ -0.45
NPHP4-211ENST00000622020 IGLV11-55A0A075B6I3 123 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 H3BRM9 83 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 IGHG4P01861 327 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 PAX2Q02962 417 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 ECSCRQ19T08 205 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 IL17RELQ6ZVW7 336 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 ZNF575Q86XF7 245 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 CFHR4Q92496 578 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 JKAMPQ9P055 326 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 U3KQK5 164 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 CTSGP08311 255 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 RPL7P18124 248 aaKnown RBP12.25□□□□□ -0.45
NPHP4-211ENST00000622020 FXYD2P54710 66 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 HSD52Q0P140 79 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 TMEM160Q9NX00 188 aa12.25□□□□□ -0.45
NPHP4-211ENST00000622020 G3V4G9 280 aa12.24□□□□□ -0.45
NPHP4-211ENST00000622020 UFSP1Q6NVU6 142 aa12.24□□□□□ -0.45
NPHP4-211ENST00000622020 GATD1Q8NB37 220 aa12.24□□□□□ -0.45
NPHP4-211ENST00000622020 RAB1BQ9H0U4 201 aa12.24□□□□□ -0.45
NPHP4-211ENST00000622020 MAP1LC3AQ9H492 121 aa12.24□□□□□ -0.45
NPHP4-211ENST00000622020 UFC1Q9Y3C8 167 aa12.24□□□□□ -0.45
NPHP4-211ENST00000622020 TNFRSF6BO95407 300 aa12.24□□□□□ -0.45
NPHP4-211ENST00000622020 RPL24P83731 157 aaKnown RBP12.24□□□□□ -0.45
NPHP4-211ENST00000622020 RNF185Q96GF1 192 aa12.24□□□□□ -0.45
NPHP4-211ENST00000622020 TRGV3P03979 118 aa12.24□□□□□ -0.45
NPHP4-211ENST00000622020 PAX8Q06710 450 aa12.24□□□□□ -0.45
NPHP4-211ENST00000622020 TMEM158Q8WZ71 300 aa12.24□□□□□ -0.45
NPHP4-211ENST00000622020 PDE6HQ13956 83 aa12.23□□□□□ -0.45
NPHP4-211ENST00000622020 S100A7AQ86SG5 101 aa12.23□□□□□ -0.45
NPHP4-211ENST00000622020 DEFB104AQ8WTQ1 72 aa12.23□□□□□ -0.45
NPHP4-211ENST00000622020 K7EP34 96 aa12.23□□□□□ -0.45
NPHP4-211ENST00000622020 KLK15Q9H2R5 256 aa12.23□□□□□ -0.45
NPHP4-211ENST00000622020 BMI1P35226 326 aa12.22□□□□□ -0.45
NPHP4-211ENST00000622020 CLEC3BP05452 202 aa12.22□□□□□ -0.45
NPHP4-211ENST00000622020 CDSNQ15517 529 aa12.22□□□□□ -0.45
NPHP4-211ENST00000622020 ZC2HC1BQ5TFG8 222 aa12.22□□□□□ -0.45
NPHP4-211ENST00000622020 MTURNQ8N3F0 131 aa12.22□□□□□ -0.45
NPHP4-211ENST00000622020 NHP2Q9NX24 153 aaKnown RBP12.22□□□□□ -0.45
NPHP4-211ENST00000622020 VPS13CQ709C8 3753 aa12.22□□□□□ -0.45
NPHP4-211ENST00000622020 TRAV40A0A0B4J280 105 aa12.21□□□□□ -0.45
NPHP4-211ENST00000622020 FCER1GP30273 86 aa12.21□□□□□ -0.45
NPHP4-211ENST00000622020 ZNF562Q6V9R5 426 aa12.21□□□□□ -0.45
NPHP4-211ENST00000622020 OR9G4Q8NGQ1 327 aa12.21□□□□□ -0.45
NPHP4-211ENST00000622020 AGRNO00468 2067 aa12.21□□□□□ -0.45
NPHP4-211ENST00000622020 A0A1W2PPM0 123 aa12.21□□□□□ -0.45
NPHP4-211ENST00000622020 FABP5P3A8MUU1 101 aa12.21□□□□□ -0.45
NPHP4-211ENST00000622020 IGLC6P0CF74 106 aa12.21□□□□□ -0.45
NPHP4-211ENST00000622020 DTX2Q86UW9 622 aa12.21□□□□□ -0.45
NPHP4-211ENST00000622020 RNF5Q99942 180 aa12.21□□□□□ -0.45
NPHP4-211ENST00000622020 CEACAM3P40198 252 aa12.21□□□□□ -0.46
NPHP4-211ENST00000622020 ODF1Q14990 250 aa12.21□□□□□ -0.46
NPHP4-211ENST00000622020 C15orf32Q32M92 178 aa12.21□□□□□ -0.46
NPHP4-211ENST00000622020 SAMD5Q5TGI4 173 aa12.21□□□□□ -0.46
NPHP4-211ENST00000622020 TMEM8BA6NDV4 472 aa12.2□□□□□ -0.46
NPHP4-211ENST00000622020 LCNL1Q6ZST4 164 aa12.2□□□□□ -0.46
NPHP4-211ENST00000622020 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
NPHP4-211ENST00000622020 CIDEAO60543 219 aa12.2□□□□□ -0.46
NPHP4-211ENST00000622020 OR4X2Q8NGF9 303 aa12.2□□□□□ -0.46
NPHP4-211ENST00000622020 HHLA3Q9XRX5 114 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms