RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PIP4P2Q8N4L2 257 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 RCHY1Q96PM5 261 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 NXT2Q9NPJ8 142 aaKnown RBP10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 IGHV4-30-2A0A087WSY4 118 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 LY6G5BQ8NDX9 201 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 MYO9AB2RTY4 2548 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 NUPR1O60356 82 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 ATP5LO75964 103 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 CTSGP08311 255 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 IL17RELQ6ZVW7 336 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 IGF2BP2-AS1Q96M15 143 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 LINC00477Q96M19 166 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 YAE1D1Q9NRH1 226 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 GCSHP23434 173 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 GATA3P23771 443 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 C8orf86Q6ZUL3 223 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 IFI27L1Q96BM0 104 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 DAZ1Q9NQZ3 744 aaKnown RBP10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 NDUFA3O95167 84 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 NRGNQ92686 78 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 SCGB3A1Q96QR1 104 aa10.35□□□□□ -0.75
PPP4R3B-206ENST00000616407 USP9YO00507 2555 aaPredicted RBP10.34□□□□□ -0.75
PPP4R3B-206ENST00000616407 TRAV8-6A0A0B4J262 113 aa10.34□□□□□ -0.75
PPP4R3B-206ENST00000616407 C19orf84I3L1E1 186 aa10.34□□□□□ -0.75
PPP4R3B-206ENST00000616407 IGHV4-38-2P0DP08 117 aa10.34□□□□□ -0.75
PPP4R3B-206ENST00000616407 VPS25Q9BRG1 176 aa10.34□□□□□ -0.75
PPP4R3B-206ENST00000616407 BEX4Q9NWD9 120 aaPredicted RBP10.34□□□□□ -0.75
PPP4R3B-206ENST00000616407 PCSK5Q92824 1860 aa10.34□□□□□ -0.75
PPP4R3B-206ENST00000616407 IFI27P40305 119 aaPredicted RBP10.34□□□□□ -0.75
PPP4R3B-206ENST00000616407 RAB37Q96AX2 223 aa10.34□□□□□ -0.75
PPP4R3B-206ENST00000616407 SIRPDQ9H106 197 aa10.33□□□□□ -0.76
PPP4R3B-206ENST00000616407 SYS1-DBNDD2H3BUS1 97 aa10.33□□□□□ -0.76
PPP4R3B-206ENST00000616407 FANCD2OSQ96PS1 177 aa10.33□□□□□ -0.76
PPP4R3B-206ENST00000616407 hDV102S1A0JD36 115 aa10.33□□□□□ -0.76
PPP4R3B-206ENST00000616407 DYNAPQ8N1N2 210 aa10.33□□□□□ -0.76
PPP4R3B-206ENST00000616407 PPP1R17O96001 155 aa10.33□□□□□ -0.76
PPP4R3B-206ENST00000616407 SYNJ2BPP57105 145 aa10.33□□□□□ -0.76
PPP4R3B-206ENST00000616407 ZNF256Q9Y2P7 627 aaPredicted RBP10.33□□□□□ -0.76
PPP4R3B-206ENST00000616407 DNAH14Q0VDD8 3507 aa10.32□□□□□ -0.76
PPP4R3B-206ENST00000616407 TNRC6BQ9UPQ9 1833 aaKnown RBP10.32□□□□□ -0.76
PPP4R3B-206ENST00000616407 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.32□□□□□ -0.76
PPP4R3B-206ENST00000616407 BLCAPP62952 87 aa10.32□□□□□ -0.76
PPP4R3B-206ENST00000616407 Q1RN00 199 aa10.32□□□□□ -0.76
PPP4R3B-206ENST00000616407 DUX3Q96PT4 197 aa10.32□□□□□ -0.76
PPP4R3B-206ENST00000616407 PEMTQ9UBM1 199 aa10.32□□□□□ -0.76
PPP4R3B-206ENST00000616407 TRAV12-3A0A0B4J271 114 aa10.32□□□□□ -0.76
PPP4R3B-206ENST00000616407 CYB5R2Q6BCY4 276 aa10.32□□□□□ -0.76
PPP4R3B-206ENST00000616407 LMO4P61968 165 aa10.31□□□□□ -0.76
PPP4R3B-206ENST00000616407 Q5PR19 223 aa10.31□□□□□ -0.76
PPP4R3B-206ENST00000616407 FAM104BQ5XKR9 115 aa10.31□□□□□ -0.76
PPP4R3B-206ENST00000616407 C10orf105Q8TEF2 133 aa10.31□□□□□ -0.76
PPP4R3B-206ENST00000616407 SCGB1C2P0DMR2 95 aa10.31□□□□□ -0.76
PPP4R3B-206ENST00000616407 SRSF1Q07955 248 aaKnown RBP eCLIP10.31□□□□□ -0.76
PPP4R3B-206ENST00000616407 DUSP14O95147 198 aaKnown RBP10.31□□□□□ -0.76
PPP4R3B-206ENST00000616407 C14orf178Q8N769 122 aaPredicted RBP10.31□□□□□ -0.76
PPP4R3B-206ENST00000616407 YPEL4Q96NS1 127 aa10.31□□□□□ -0.76
PPP4R3B-206ENST00000616407 PRORYQ9H606 182 aa10.31□□□□□ -0.76
PPP4R3B-206ENST00000616407 NDUFA4O00483 81 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 GTF2H5Q6ZYL4 71 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 DEFB104AQ8WTQ1 72 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 CFHR4Q92496 578 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 WNK1Q9H4A3 2382 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 USP9XQ93008 2570 aaPredicted RBP10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 LAMA1P25391 3075 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 CRYGBP07316 175 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 OR1N2Q8NGR9 330 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 C1orf159Q96HA4 380 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 ODF3BA8MYP8 253 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 OR11H12B2RN74 326 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 FSTL3O95633 263 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 OR11H1Q8NG94 326 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 OR11H2Q8NH07 326 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 LINC01587Q99440 93 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 KLF12Q9Y4X4 402 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 TLN2Q9Y4G6 2542 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 NPIPB6E9PJ23 425 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 HIST1H4GQ99525 98 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 ST20Q9HBF5 79 aa10.3□□□□□ -0.76
PPP4R3B-206ENST00000616407 IGHV4-59P01825 116 aa10.29□□□□□ -0.76
PPP4R3B-206ENST00000616407 WI2-2373I1.2A0A1W2PRP0 233 aa10.29□□□□□ -0.76
PPP4R3B-206ENST00000616407 DEFB112Q30KQ8 113 aa10.29□□□□□ -0.76
PPP4R3B-206ENST00000616407 TNFRSF13BO14836 293 aaPredicted RBP10.29□□□□□ -0.76
PPP4R3B-206ENST00000616407 EGR2P11161 476 aaPredicted RBP10.29□□□□□ -0.76
PPP4R3B-206ENST00000616407 C11orf71Q6IPW1 123 aa10.29□□□□□ -0.76
PPP4R3B-206ENST00000616407 ERASQ7Z444 233 aa10.29□□□□□ -0.76
PPP4R3B-206ENST00000616407 C5orf56Q8N8D9 126 aa10.29□□□□□ -0.76
PPP4R3B-206ENST00000616407 WIPF2Q8TF74 440 aaPredicted RBP10.29□□□□□ -0.76
PPP4R3B-206ENST00000616407 AGPAT4-IT1Q9H0P7 198 aa10.29□□□□□ -0.76
PPP4R3B-206ENST00000616407 ZFYVE26Q68DK2 2539 aa10.29□□□□□ -0.76
PPP4R3B-206ENST00000616407 LY6LH3BQJ8 138 aa10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 IGLV2-8P01709 118 aa10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 TMEM95Q3KNT9 176 aa10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 MRPL51Q4U2R6 128 aaKnown RBP10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 PRSS57Q6UWY2 283 aa10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 Q96MF0 132 aa10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 TMEM170BQ5T4T1 132 aa10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 SONP18583 2426 aaKnown RBP10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 GAGE10A6NGK3 116 aa10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 BUB3O43684 328 aa10.28□□□□□ -0.76
PPP4R3B-206ENST00000616407 TNFRSF6BO95407 300 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms