RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 WIPF3A6NGB9 483 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 I3L3M4 83 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 CD5P06127 495 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 Q86TA4 180 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 ADAMTS7Q9UKP4 1686 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.39□□□□□ -0.43
TNXB-209ENST00000613214 IGKV2-29A2NJV5 120 aaPredicted RBP12.39□□□□□ -0.43
TNXB-209ENST00000613214 C15orf62A8K5M9 175 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 IGHV4-59P01825 116 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 HLA-DMBP28068 263 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 IGLV3-32A0A0A0MS00 114 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 REG4Q9BYZ8 158 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 IGHV2-70DA0A0C4DH43 119 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 C3orf79P0CE67 100 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 ADAMTSL5Q6ZMM2 481 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 WFDC11Q8NEX6 87 aa12.39□□□□□ -0.43
TNXB-209ENST00000613214 DSCR8Q96T75 97 aa12.38□□□□□ -0.43
TNXB-209ENST00000613214 SPTBN2O15020 2390 aa12.38□□□□□ -0.43
TNXB-209ENST00000613214 TRPM7Q96QT4 1865 aa12.38□□□□□ -0.43
TNXB-209ENST00000613214 FAM90A9PA6NNJ1 464 aa12.38□□□□□ -0.43
TNXB-209ENST00000613214 SLURP1P55000 103 aa12.38□□□□□ -0.43
TNXB-209ENST00000613214 SYS1-DBNDD2H3BUS1 97 aa12.38□□□□□ -0.43
TNXB-209ENST00000613214 SOCS3O14543 225 aa12.38□□□□□ -0.43
TNXB-209ENST00000613214 IGHV1OR15-1A0A075B7D0 117 aa12.37□□□□□ -0.43
TNXB-209ENST00000613214 Q6ZS92 163 aa12.37□□□□□ -0.43
TNXB-209ENST00000613214 SBF1O95248 1867 aa12.37□□□□□ -0.43
TNXB-209ENST00000613214 DEFB112Q30KQ8 113 aa12.37□□□□□ -0.43
TNXB-209ENST00000613214 F8W735 103 aaPredicted RBP12.36□□□□□ -0.43
TNXB-209ENST00000613214 CYYR1Q96J86 154 aa12.36□□□□□ -0.43
TNXB-209ENST00000613214 PLXND1Q9Y4D7 1925 aa12.36□□□□□ -0.43
TNXB-209ENST00000613214 GNRH2O43555 120 aa12.36□□□□□ -0.43
TNXB-209ENST00000613214 BUB3O43684 328 aa12.36□□□□□ -0.43
TNXB-209ENST00000613214 B3GALT5-AS1P59052 145 aa12.36□□□□□ -0.43
TNXB-209ENST00000613214 WDR86Q86TI4 376 aa12.36□□□□□ -0.43
TNXB-209ENST00000613214 HIST3H2BBQ8N257 126 aa12.36□□□□□ -0.43
TNXB-209ENST00000613214 SHANK2-AS3Q9BTD1 123 aa12.36□□□□□ -0.43
TNXB-209ENST00000613214 SMPXQ9UHP9 88 aa12.36□□□□□ -0.43
TNXB-209ENST00000613214 RALGAPA2Q2PPJ7 1873 aa12.35□□□□□ -0.43
TNXB-209ENST00000613214 LRCOL1A6NCL2 159 aa12.35□□□□□ -0.43
TNXB-209ENST00000613214 Q6ZRM9 215 aa12.35□□□□□ -0.43
TNXB-209ENST00000613214 TMEM75Q8N9X5 138 aa12.35□□□□□ -0.43
TNXB-209ENST00000613214 GBF1Q92538 1859 aa12.35□□□□□ -0.43
TNXB-209ENST00000613214 LOC105371267A0A1B0GV96 52 aa12.35□□□□□ -0.43
TNXB-209ENST00000613214 OOSP1A8MZH6 123 aa12.35□□□□□ -0.43
TNXB-209ENST00000613214 CCL24O00175 119 aa12.35□□□□□ -0.43
TNXB-209ENST00000613214 IGHG4P01861 327 aa12.34□□□□□ -0.43
TNXB-209ENST00000613214 NDUFAF3Q9BU61 184 aa12.34□□□□□ -0.43
TNXB-209ENST00000613214 EP300Q09472 2414 aaPredicted RBP12.34□□□□□ -0.43
TNXB-209ENST00000613214 CDKN1BP46527 198 aa12.34□□□□□ -0.43
TNXB-209ENST00000613214 C5orf38Q86SI9 138 aa12.34□□□□□ -0.43
TNXB-209ENST00000613214 NDUFS8O00217 210 aa12.34□□□□□ -0.43
TNXB-209ENST00000613214 NEUROG3Q9Y4Z2 214 aa12.34□□□□□ -0.43
TNXB-209ENST00000613214 U3KQE9 123 aa12.33□□□□□ -0.44
TNXB-209ENST00000613214 SDHAF1A6NFY7 115 aa12.33□□□□□ -0.44
TNXB-209ENST00000613214 C2orf66Q6UXQ4 117 aa12.33□□□□□ -0.44
TNXB-209ENST00000613214 C9orf153Q5TBE3 101 aa12.33□□□□□ -0.44
TNXB-209ENST00000613214 C17orf77Q96MU5 243 aa12.33□□□□□ -0.44
TNXB-209ENST00000613214 HELZP42694 1942 aaKnown RBP12.33□□□□□ -0.44
TNXB-209ENST00000613214 J3QRE1 110 aa12.33□□□□□ -0.44
TNXB-209ENST00000613214 K7EMI3 77 aa12.33□□□□□ -0.44
TNXB-209ENST00000613214 RMI2Q96E14 147 aa12.33□□□□□ -0.44
TNXB-209ENST00000613214 NCOR1O75376 2440 aa12.32□□□□□ -0.44
TNXB-209ENST00000613214 UBE2CO00762 179 aa12.32□□□□□ -0.44
TNXB-209ENST00000613214 PIFOQ8TCI5 191 aa12.32□□□□□ -0.44
TNXB-209ENST00000613214 K7ERJ3 54 aa12.32□□□□□ -0.44
TNXB-209ENST00000613214 SRSF8Q9BRL6 282 aaKnown RBP12.32□□□□□ -0.44
TNXB-209ENST00000613214 NMSQ5H8A3 153 aa12.32□□□□□ -0.44
TNXB-209ENST00000613214 PFN1P07737 140 aaKnown RBP12.31□□□□□ -0.44
TNXB-209ENST00000613214 NPBQ8NG41 125 aa12.31□□□□□ -0.44
TNXB-209ENST00000613214 CYTL1Q9NRR1 136 aa12.31□□□□□ -0.44
TNXB-209ENST00000613214 ZNF407Q9C0G0 2248 aa12.31□□□□□ -0.44
TNXB-209ENST00000613214 FGF6P10767 208 aa12.31□□□□□ -0.44
TNXB-209ENST00000613214 TEX48A0A1B0GUV7 120 aa12.31□□□□□ -0.44
TNXB-209ENST00000613214 RNF5Q99942 180 aa12.31□□□□□ -0.44
TNXB-209ENST00000613214 MRPL51Q4U2R6 128 aaKnown RBP12.31□□□□□ -0.44
TNXB-209ENST00000613214 OVOL2Q9BRP0 275 aa12.31□□□□□ -0.44
TNXB-209ENST00000613214 ABCA1O95477 2261 aa12.31□□□□□ -0.44
TNXB-209ENST00000613214 USF3Q68DE3 2245 aa12.3□□□□□ -0.44
TNXB-209ENST00000613214 K7EM74 188 aa12.3□□□□□ -0.44
TNXB-209ENST00000613214 TIRAPP58753 221 aa12.3□□□□□ -0.44
TNXB-209ENST00000613214 ZNF503Q96F45 646 aa12.3□□□□□ -0.44
TNXB-209ENST00000613214 CHKB-CPT1BH3BT56 60 aa12.3□□□□□ -0.44
TNXB-209ENST00000613214 BAALCQ8WXS3 180 aa12.3□□□□□ -0.44
TNXB-209ENST00000613214 ZNF503-AS2A6NEH8 195 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 PROP1O75360 226 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 WISP1O95388 367 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 TMEM14EPQ6UXP3 125 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 TSSC4Q9Y5U2 329 aaPredicted RBP12.29□□□□□ -0.44
TNXB-209ENST00000613214 WNK2Q9Y3S1 2297 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 NCR3O14931 201 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 FGF16O43320 207 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 TRACP01848 142 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 LINC01549A6NIU2 74 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 IGHV4-38-2P0DP08 117 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 NBL1P41271 181 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 FOXE3Q13461 319 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 CFHR4Q92496 578 aa12.29□□□□□ -0.44
TNXB-209ENST00000613214 HOXB4P17483 251 aaPredicted RBP12.28□□□□□ -0.44
TNXB-209ENST00000613214 ZFP36P26651 326 aaKnown RBP12.28□□□□□ -0.44
TNXB-209ENST00000613214 CSRP3P50461 194 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms