RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 IGKV2D-28P01615 120 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 SLC25A4P12235 298 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 QRFPP83859 136 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 SMIM5Q71RC9 77 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 ATP5L2Q7Z4Y8 100 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 SLC22A24Q8N4F4 322 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 LINC00311Q8N616 119 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 APCDD1LQ8NCL9 501 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 C18orf32Q8TCD1 76 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 C20orf78Q9BR46 151 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 TM2D3Q9BRN9 247 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 SLC35B3Q9H1N7 401 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 FAM60AQ9NP50 221 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 ANAPC10Q9UM13 185 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 C1orf167Q5SNV9 1468 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 TET3O43151 1660 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 ALPK3Q96L96 1907 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 DNMT1P26358 1616 aaKnown RBP3.01□□□□□ -1.93
LINC00397-202ENST00000606785 HECW1Q76N89 1606 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 PDCD11Q14690 1871 aaKnown RBP3.01□□□□□ -1.93
LINC00397-202ENST00000606785 DSPPQ9NZW4 1301 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 MROH2BQ7Z745 1585 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 FXYD6-FXYD2A0A087WZ82 144 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 TRAV8-1A0A0A6YYK1 113 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 TRAV40A0A0B4J280 105 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 MUC21A0A140T8X8 626 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 M0R129 80 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 INSL3P51460 131 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 C1orf140Q5VVS0 124 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 ZNF322Q6U7Q0 402 aaPredicted RBP3.01□□□□□ -1.93
LINC00397-202ENST00000606785 LINC00305Q7Z4B0 112 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 VN1R4Q7Z5H5 301 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 KTN1-AS1Q86SY8 53 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 RNF182Q8N6D2 247 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 PRELID3AQ96N28 172 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 EIF5A2Q9GZV4 153 aaKnown RBP3.01□□□□□ -1.93
LINC00397-202ENST00000606785 FXYD6Q9H0Q3 95 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 TAAR3PQ9P1P4 343 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 ANKRD36CQ5JPF3 1778 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 MON2Q7Z3U7 1717 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 ADGRL1O94910 1474 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 IQGAP1P46940 1657 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 USP54Q70EL1 1684 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 PLXNA4Q9HCM2 1894 aa3.01□□□□□ -1.93
LINC00397-202ENST00000606785 DOCK2Q92608 1830 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 RGPD3A6NKT7 1758 aaPredicted RBP3□□□□□ -1.93
LINC00397-202ENST00000606785 ATP7AQ04656 1500 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 RGPD1P0DJD0 1748 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 COL24A1Q17RW2 1714 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 ARHGEF28Q8N1W1 1705 aaKnown RBP3□□□□□ -1.93
LINC00397-202ENST00000606785 PEAK1Q9H792 1746 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 NWD2Q9ULI1 1742 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 MYLKQ15746 1914 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 IGHV1-58A0A0C4DH39 117 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 A0A0D9SFI3 127 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 IRGMA1A4Y4 181 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 GRIFINA4D1Z8 144 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 NAP1L6A6NFF2 107 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 FAM24AA6NFZ4 105 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 C17orf112F2Z3M2 114 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 H3BUT2 72 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 CREBL2O60519 120 aaPredicted RBP3□□□□□ -1.93
LINC00397-202ENST00000606785 RBP4P02753 201 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 CD3DP04234 171 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 COX7CP15954 63 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 HLA-DMBP28068 263 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 FOXF1Q12946 379 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 LGALS9BQ3B8N2 356 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 LINC01545Q5VT33 79 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 MARCH3Q86UD3 253 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 CMTM2Q8TAZ6 248 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 KLF14Q8TD94 323 aaPredicted RBP3□□□□□ -1.93
LINC00397-202ENST00000606785 PPDPFLQ8WWR9 84 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 TVP23CQ96ET8 276 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 C11orf68Q9H3H3 251 aaKnown RBP3□□□□□ -1.93
LINC00397-202ENST00000606785 C16orf95Q9H693 158 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 SERP1Q9Y6X1 66 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 E9PCH4 1651 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 GCC2Q8IWJ2 1684 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 MYO5AQ9Y4I1 1855 aaKnown RBP3□□□□□ -1.93
LINC00397-202ENST00000606785 SCN9AQ15858 1988 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 CDC42BPGQ6DT37 1551 aa3□□□□□ -1.93
LINC00397-202ENST00000606785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.99□□□□□ -1.93
LINC00397-202ENST00000606785 PXDNQ92626 1479 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 LRCOL1A6NCL2 159 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 H3BT86 120 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 SYS1-DBNDD2H3BUS1 97 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 GNGT2O14610 69 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 UBE2L6O14933 153 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 CST7O76096 145 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 NDUFB2O95178 105 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 TCRAP04437 139 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 ZNF286BP0CG31 522 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 LINC00315P59091 139 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 ETDBQ3ZM63 59 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 FAM19A3Q7Z5A8 133 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 BPIFA4PQ86YQ2 179 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 SIGLECL1Q8N7X8 197 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 WFDC11Q8NEX6 87 aa2.99□□□□□ -1.93
LINC00397-202ENST00000606785 C2orf50Q96LR7 162 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms