RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 H3BTX0 84 aa13.26□□□□□ -0.29
PPFIA3-207ENST00000602716 PROK1P58294 105 aa13.26□□□□□ -0.29
PPFIA3-207ENST00000602716 RCHY1Q96PM5 261 aa13.26□□□□□ -0.29
PPFIA3-207ENST00000602716 RNF114Q9Y508 228 aa13.26□□□□□ -0.29
PPFIA3-207ENST00000602716 RAB4AP20338 218 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 SRIP30626 198 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 NUTF2P61970 127 aaKnown RBP13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 RASL11AQ6T310 242 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 STXBP6Q8NFX7 210 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 GRAMD2BQ96HH9 432 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 A0A1W2PS18 150 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 M0R143 59 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 APCSP02743 223 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 KRTAP10-3P60369 221 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 TMEM183BQ1AE95 376 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 NUDT10Q8NFP7 164 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 NUDT11Q96G61 164 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 ZNF331Q9NQX6 463 aaPredicted RBP13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 ZNF586Q9NXT0 402 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 RABAC1Q9UI14 185 aa13.25□□□□□ -0.29
PPFIA3-207ENST00000602716 A0A1W2PRX2 142 aa13.24□□□□□ -0.29
PPFIA3-207ENST00000602716 ZNF253O75346 499 aa13.24□□□□□ -0.29
PPFIA3-207ENST00000602716 TMEM190Q8WZ59 177 aa13.24□□□□□ -0.29
PPFIA3-207ENST00000602716 CITED2Q99967 270 aaPredicted RBP13.24□□□□□ -0.29
PPFIA3-207ENST00000602716 NDUFA4O00483 81 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 MRPS12O15235 138 aaKnown RBP13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 GNG5P63218 68 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 Q8N976 141 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 KLHL30-AS1Q8NEE0 82 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 NRN1Q9NPD7 142 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 EPDR1Q9UM22 224 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 SELENOKQ9Y6D0 94 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 NIPBLQ6KC79 2804 aaeCLIP13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 AMTP48728 403 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 SLAQ13239 276 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 C8orf86Q6ZUL3 223 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 NUP35Q8NFH5 326 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 MIEN1Q9BRT3 115 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 VAMP8Q9BV40 100 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 KLF12Q9Y4X4 402 aa13.23□□□□□ -0.29
PPFIA3-207ENST00000602716 ZNF324O75467 553 aaPredicted RBP13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 MRPL52Q86TS9 123 aaKnown RBP13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 C4orf3Q8WVX3 66 aa13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 JMJD1CQ15652 2540 aa13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 SLC25A5P05141 298 aaKnown RBP13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 HOXD3P31249 432 aaPredicted RBP13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 SLURP1P55000 103 aa13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 KRTDAPP60985 99 aa13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 TM4SF20Q53R12 229 aa13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 GDF5OSQ5U4N7 250 aa13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 BLNKQ8WV28 456 aa13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 SMIM12Q96EX1 92 aa13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 C17orf77Q96MU5 243 aa13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 PAM16Q9Y3D7 125 aa13.22□□□□□ -0.29
PPFIA3-207ENST00000602716 PMCHP20382 165 aa13.21□□□□□ -0.29
PPFIA3-207ENST00000602716 UBE2G1P62253 170 aa13.21□□□□□ -0.29
PPFIA3-207ENST00000602716 PRR27Q6MZM9 219 aa13.21□□□□□ -0.29
PPFIA3-207ENST00000602716 ZNF705AQ6ZN79 300 aaPredicted RBP13.21□□□□□ -0.29
PPFIA3-207ENST00000602716 TSKUQ8WUA8 353 aa13.21□□□□□ -0.29
PPFIA3-207ENST00000602716 PGPA6NDG6 321 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 DIRC3C9JPN6 131 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 TCAPO15273 167 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 NBEAP1P0C6P0 100 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 HIST1H1EP10412 219 aaKnown RBP13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 C18orf32Q8TCD1 76 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 NEU1Q99519 415 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 U3KQE9 123 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 BUB3O43684 328 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 IGLC2P0DOY2 106 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 PRB4P10163 310 aaPredicted RBP13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 SYNJ2BPP57105 145 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 NIT1Q86X76 327 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 METTL26Q96S19 204 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 ATG101Q9BSB4 218 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 SMAD5-AS1Q9Y6J3 95 aa13.2□□□□□ -0.3
PPFIA3-207ENST00000602716 ADARB2-AS1A8MUL3 147 aa13.19□□□□□ -0.3
PPFIA3-207ENST00000602716 OR11H1Q8NG94 326 aa13.19□□□□□ -0.3
PPFIA3-207ENST00000602716 OR4B1Q8NGF8 309 aa13.19□□□□□ -0.3
PPFIA3-207ENST00000602716 GPR82Q96P67 336 aa13.19□□□□□ -0.3
PPFIA3-207ENST00000602716 MLST8Q9BVC4 326 aa13.19□□□□□ -0.3
PPFIA3-207ENST00000602716 TMEM14CQ9P0S9 112 aa13.19□□□□□ -0.3
PPFIA3-207ENST00000602716 HIGD1CA8MV81 97 aa13.18□□□□□ -0.3
PPFIA3-207ENST00000602716 GPHB5Q86YW7 130 aa13.18□□□□□ -0.3
PPFIA3-207ENST00000602716 C5orf17Q8NAS9 161 aa13.18□□□□□ -0.3
PPFIA3-207ENST00000602716 A0A1B0GXF2 115 aa13.18□□□□□ -0.3
PPFIA3-207ENST00000602716 TMEM213A2RRL7 107 aa13.18□□□□□ -0.3
PPFIA3-207ENST00000602716 KLF5Q13887 457 aaPredicted RBP13.18□□□□□ -0.3
PPFIA3-207ENST00000602716 ATP5L2Q7Z4Y8 100 aa13.18□□□□□ -0.3
PPFIA3-207ENST00000602716 BPIFA4PQ86YQ2 179 aa13.18□□□□□ -0.3
PPFIA3-207ENST00000602716 FMC1Q96HJ9 113 aa13.18□□□□□ -0.3
PPFIA3-207ENST00000602716 RAX2Q96IS3 184 aa13.18□□□□□ -0.3
PPFIA3-207ENST00000602716 LTAP01374 205 aa13.17□□□□□ -0.3
PPFIA3-207ENST00000602716 SGK494Q96LW2 274 aa13.17□□□□□ -0.3
PPFIA3-207ENST00000602716 C3orf79P0CE67 100 aa13.17□□□□□ -0.3
PPFIA3-207ENST00000602716 CTRLP40313 264 aa13.17□□□□□ -0.3
PPFIA3-207ENST00000602716 FAM19A2Q8N3H0 131 aa13.17□□□□□ -0.3
PPFIA3-207ENST00000602716 OR1N2Q8NGR9 330 aa13.17□□□□□ -0.3
PPFIA3-207ENST00000602716 WFDC12Q8WWY7 111 aa13.17□□□□□ -0.3
PPFIA3-207ENST00000602716 Q9H3A6 140 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms