RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 TMEM52BQ4KMG9 183 aa5.74□□□□□ -1.49
LINC00347-202ENST00000594461 FAM104BQ5XKR9 115 aa5.74□□□□□ -1.49
LINC00347-202ENST00000594461 ZNF793Q6ZN11 406 aa5.74□□□□□ -1.49
LINC00347-202ENST00000594461 GFRA4Q9GZZ7 299 aa5.74□□□□□ -1.49
LINC00347-202ENST00000594461 PROK2Q9HC23 129 aa5.74□□□□□ -1.49
LINC00347-202ENST00000594461 CCL28Q9NRJ3 127 aa5.74□□□□□ -1.49
LINC00347-202ENST00000594461 TRANK1O15050 2925 aa5.74□□□□□ -1.49
LINC00347-202ENST00000594461 IGKV1-9A0A0C4DH69 117 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 LINC00271P0C7V0 271 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 ERCC8Q13216 396 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 ORMDL2Q53FV1 153 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 C2orf82Q6UX34 121 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 SFTPA2Q8IWL1 248 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 SFTPA1Q8IWL2 248 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 OVCA2Q8WZ82 227 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 PLPPR2Q96GM1 343 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 PGLYRP4Q96LB8 373 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 SHANK1Q9Y566 2161 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 FOXS1O43638 330 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 IGKV1-5P01602 117 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 LINC00305Q7Z4B0 112 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 TMEM243Q9BU79 118 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 RPP21Q9H633 154 aaKnown RBP5.73□□□□□ -1.49
LINC00347-202ENST00000594461 FREM3P0C091 2139 aa5.73□□□□□ -1.49
LINC00347-202ENST00000594461 IGKV1D-42A0A075B6H8 117 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 SS18L1O75177 396 aaPredicted RBP5.72□□□□□ -1.49
LINC00347-202ENST00000594461 IGKV1-39P01597 117 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 IGKV1D-39P04432 117 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 MRPS36P82909 103 aaKnown RBP5.72□□□□□ -1.49
LINC00347-202ENST00000594461 CFHR1Q03591 330 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 PAX8Q06710 450 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 FHL2Q14192 279 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 CD164L2Q6UWJ8 174 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 FGFBP3Q8TAT2 258 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 VCANP13611 3396 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 IGKV1D-13A0A0B4J2D9 117 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 IGKV1-13P0DP09 117 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 HOXD3P31249 432 aaPredicted RBP5.72□□□□□ -1.49
LINC00347-202ENST00000594461 APOC4P55056 127 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 SS18Q15532 418 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 CRIP3Q6Q6R5 217 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 SDIM1Q6ZPB5 146 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 KLF16Q9BXK1 252 aaPredicted RBP5.72□□□□□ -1.49
LINC00347-202ENST00000594461 C6orf106Q9H6K1 298 aaPredicted RBP5.72□□□□□ -1.49
LINC00347-202ENST00000594461 PRO1854Q9UHT4 67 aa5.72□□□□□ -1.49
LINC00347-202ENST00000594461 TMEM202A6NGA9 273 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 M0R1B8 84 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 SPRY2O43597 315 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 PRSS1P07477 247 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 CDAP32320 146 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 SAA4P35542 130 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 SNRPD3P62318 126 aaKnown RBP5.71□□□□□ -1.5
LINC00347-202ENST00000594461 MIC13Q5XKP0 118 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 SMCR5Q8TEV8 140 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 TAC3Q9UHF0 121 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 THADAQ6YHU6 1953 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 TRBV7-1A0A0A6YYK4 115 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 C7orf69Q9H7B7 122 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 RBM12B-AS1Q9P1G2 102 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 COL6A3P12111 3177 aa5.71□□□□□ -1.5
LINC00347-202ENST00000594461 TRBV7-6A0A0J9YX20 115 aa5.7□□□□□ -1.5
LINC00347-202ENST00000594461 LOC389332A0A1B0GUA5 103 aa5.7□□□□□ -1.5
LINC00347-202ENST00000594461 PRSS38A1L453 326 aa5.7□□□□□ -1.5
LINC00347-202ENST00000594461 H3BTX0 84 aa5.7□□□□□ -1.5
LINC00347-202ENST00000594461 LINC01565O15544 149 aa5.7□□□□□ -1.5
LINC00347-202ENST00000594461 VPREB1P12018 145 aa5.7□□□□□ -1.5
LINC00347-202ENST00000594461 CCL1P22362 96 aa5.7□□□□□ -1.5
LINC00347-202ENST00000594461 Q8N8P6 123 aa5.7□□□□□ -1.5
LINC00347-202ENST00000594461 S1PR3Q99500 378 aa5.7□□□□□ -1.5
LINC00347-202ENST00000594461 SLC25A15Q9Y619 301 aa5.7□□□□□ -1.5
LINC00347-202ENST00000594461 CFC1BP0CG36 223 aa5.7□□□□□ -1.5
LINC00347-202ENST00000594461 CFC1P0CG37 223 aa5.7□□□□□ -1.5
LINC00347-202ENST00000594461 RNASE2P10153 161 aaKnown RBP5.7□□□□□ -1.5
LINC00347-202ENST00000594461 RPP25Q9BUL9 199 aaKnown RBP5.7□□□□□ -1.5
LINC00347-202ENST00000594461 TRAV40A0A0B4J280 105 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 A0A0B4J2C4 111 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 PLAC8L1A1L4L8 177 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 C17orf100A8MU93 164 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 FXYD7P58549 80 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 LY6G5BQ8NDX9 201 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 ZNF837Q96EG3 531 aaPredicted RBP5.69□□□□□ -1.5
LINC00347-202ENST00000594461 ZNF714Q96N38 554 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 SRXN1Q9BYN0 137 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 ZNF492Q9P255 531 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 KIAA1549LQ6ZVL6 1849 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 TIMM17BO60830 172 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 FOXF2Q12947 444 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 ZNF497Q6ZNH5 498 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 Q6ZPA2 131 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 SLC50A1Q9BRV3 221 aa5.69□□□□□ -1.5
LINC00347-202ENST00000594461 PRRC2BQ5JSZ5 2229 aaKnown RBP5.68□□□□□ -1.5
LINC00347-202ENST00000594461 IQCF6A8MYZ5 107 aa5.68□□□□□ -1.5
LINC00347-202ENST00000594461 GP9P14770 177 aa5.68□□□□□ -1.5
LINC00347-202ENST00000594461 RIGQ13278 110 aa5.68□□□□□ -1.5
LINC00347-202ENST00000594461 CIRBPQ14011 172 aaKnown RBP5.68□□□□□ -1.5
LINC00347-202ENST00000594461 FAM223AQ8IWN6 122 aa5.68□□□□□ -1.5
LINC00347-202ENST00000594461 RNASE6Q93091 150 aaKnown RBP5.68□□□□□ -1.5
LINC00347-202ENST00000594461 DYNLRB1Q9NP97 96 aa5.68□□□□□ -1.5
LINC00347-202ENST00000594461 MYOFQ9NZM1 2061 aa5.68□□□□□ -1.5
LINC00347-202ENST00000594461 A0A0C4DFX4 3053 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms