RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 ONECUT1Q9UBC0 465 aa11.58□□□□□ -0.56
SMARCA4-219ENST00000592604 DMXL2Q8TDJ6 3036 aa11.58□□□□□ -0.56
SMARCA4-219ENST00000592604 SMKR1H3BMG3 65 aa11.58□□□□□ -0.56
SMARCA4-219ENST00000592604 Q8NA96 180 aa11.58□□□□□ -0.56
SMARCA4-219ENST00000592604 CNFNQ9BYD5 112 aa11.58□□□□□ -0.56
SMARCA4-219ENST00000592604 K7EP34 96 aa11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 PSMG4Q5JS54 123 aa11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 TTC9CQ8N5M4 171 aa11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 ADGRG4Q8IZF6 3080 aa11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 IGHG4P01861 327 aa11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 ATP5J2P56134 94 aa11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 ZNF562Q6V9R5 426 aa11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 IGFBPL1Q8WX77 278 aa11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 RNF185Q96GF1 192 aa11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 C21orf62Q9NYP8 219 aa11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 HILPDAQ9Y5L2 63 aa11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 ZNF318Q5VUA4 2279 aa11.57□□□□□ -0.56
SMARCA4-219ENST00000592604 H3BUT2 72 aa11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 PCP2Q8IVA1 136 aa11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 FAM110AQ9BQ89 295 aa11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 TPRP12270 2363 aaKnown RBP11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 A0A0G2JLM5 398 aa11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 SIGMAR1Q99720 223 aa11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 VGLL1Q99990 258 aa11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 ZMAT4Q9H898 229 aa11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 DKK2Q9UBU2 259 aa11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 SMAD5-AS1Q9Y6J3 95 aa11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 LAMA5O15230 3695 aa11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 BSNQ9UPA5 3926 aa11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 TNFRSF18Q9Y5U5 241 aa11.56□□□□□ -0.56
SMARCA4-219ENST00000592604 APC2O95996 2303 aa11.55□□□□□ -0.56
SMARCA4-219ENST00000592604 A4D1N5 150 aa11.55□□□□□ -0.56
SMARCA4-219ENST00000592604 OR2K2Q8NGT1 345 aa11.55□□□□□ -0.56
SMARCA4-219ENST00000592604 MAP1LC3AQ9H492 121 aa11.55□□□□□ -0.56
SMARCA4-219ENST00000592604 GEMIN7Q9H840 131 aaKnown RBP11.55□□□□□ -0.56
SMARCA4-219ENST00000592604 ZNF672Q499Z4 452 aaPredicted RBP11.55□□□□□ -0.56
SMARCA4-219ENST00000592604 Q8TAT8 98 aa11.55□□□□□ -0.56
SMARCA4-219ENST00000592604 ARPC1AQ92747 370 aa11.55□□□□□ -0.56
SMARCA4-219ENST00000592604 ODF3BA8MYP8 253 aa11.54□□□□□ -0.56
SMARCA4-219ENST00000592604 NMUP48645 174 aa11.54□□□□□ -0.56
SMARCA4-219ENST00000592604 A0A1W2PRD5 423 aa11.54□□□□□ -0.56
SMARCA4-219ENST00000592604 A0A1W2PRF3 423 aa11.54□□□□□ -0.56
SMARCA4-219ENST00000592604 A0A1W2PRM7 423 aa11.54□□□□□ -0.56
SMARCA4-219ENST00000592604 CTSGP08311 255 aa11.54□□□□□ -0.56
SMARCA4-219ENST00000592604 FCER1GP30273 86 aa11.54□□□□□ -0.56
SMARCA4-219ENST00000592604 TCTAP57738 103 aa11.54□□□□□ -0.56
SMARCA4-219ENST00000592604 CCDC144NLQ6NUI1 221 aa11.54□□□□□ -0.56
SMARCA4-219ENST00000592604 MSRB1Q9NZV6 116 aa11.54□□□□□ -0.56
SMARCA4-219ENST00000592604 SELENOKQ9Y6D0 94 aa11.54□□□□□ -0.56
SMARCA4-219ENST00000592604 DMXL1Q9Y485 3027 aa11.54□□□□□ -0.56
SMARCA4-219ENST00000592604 FABP5P3A8MUU1 101 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 NDPQ00604 133 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 HIGD1BQ9P298 99 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 ARL3P36405 182 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 HES1Q14469 280 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 LINC01559Q495D7 138 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 NXT2Q9NPJ8 142 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 HHLA3Q9XRX5 114 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 ARHGAP32A7KAX9 2087 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 ACACAQ13085 2346 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 A0A1W2PPM0 123 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 M0R1W7 72 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 NEGR1Q7Z3B1 354 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 OR5A1Q8NGJ0 315 aa11.53□□□□□ -0.56
SMARCA4-219ENST00000592604 DCHS1Q96JQ0 3298 aa11.52□□□□□ -0.56
SMARCA4-219ENST00000592604 SCGB2A1O75556 95 aa11.52□□□□□ -0.57
SMARCA4-219ENST00000592604 ORM1P02763 201 aa11.52□□□□□ -0.57
SMARCA4-219ENST00000592604 HLA-DMBP28068 263 aa11.52□□□□□ -0.57
SMARCA4-219ENST00000592604 LEPP41159 167 aa11.52□□□□□ -0.57
SMARCA4-219ENST00000592604 TNFRSF6BO95407 300 aa11.52□□□□□ -0.57
SMARCA4-219ENST00000592604 GATA3P23771 443 aa11.52□□□□□ -0.57
SMARCA4-219ENST00000592604 PRTN3P24158 256 aa11.52□□□□□ -0.57
SMARCA4-219ENST00000592604 IGFL4Q6B9Z1 124 aa11.52□□□□□ -0.57
SMARCA4-219ENST00000592604 WFDC3Q8IUB2 231 aa11.52□□□□□ -0.57
SMARCA4-219ENST00000592604 GAS8-AS1O95177 125 aa11.51□□□□□ -0.57
SMARCA4-219ENST00000592604 IGHV3-23P01764 117 aa11.51□□□□□ -0.57
SMARCA4-219ENST00000592604 KLRD1Q13241 179 aa11.51□□□□□ -0.57
SMARCA4-219ENST00000592604 Q8N6K4 173 aa11.51□□□□□ -0.57
SMARCA4-219ENST00000592604 C18orf15Q96N68 181 aa11.51□□□□□ -0.57
SMARCA4-219ENST00000592604 NAA38Q9BRA0 125 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-219ENST00000592604 TSPAN13O95857 204 aa11.51□□□□□ -0.57
SMARCA4-219ENST00000592604 RAB37Q96AX2 223 aa11.51□□□□□ -0.57
SMARCA4-219ENST00000592604 EVI2AP22794 236 aa11.5□□□□□ -0.57
SMARCA4-219ENST00000592604 IGKV2D-26A0A0A0MRZ7 120 aa11.5□□□□□ -0.57
SMARCA4-219ENST00000592604 DYNAPQ8N1N2 210 aa11.5□□□□□ -0.57
SMARCA4-219ENST00000592604 LINC01560Q8TB33 94 aa11.5□□□□□ -0.57
SMARCA4-219ENST00000592604 SPCS1Q9Y6A9 102 aa11.5□□□□□ -0.57
SMARCA4-219ENST00000592604 ANKRD11Q6UB99 2663 aaPredicted RBP11.5□□□□□ -0.57
SMARCA4-219ENST00000592604 RBAKDNA6NC62 111 aa11.49□□□□□ -0.57
SMARCA4-219ENST00000592604 SMIM13P0DJ93 91 aa11.49□□□□□ -0.57
SMARCA4-219ENST00000592604 EBI3Q14213 229 aa11.49□□□□□ -0.57
SMARCA4-219ENST00000592604 VKORC1Q9BQB6 163 aa11.49□□□□□ -0.57
SMARCA4-219ENST00000592604 YAE1D1Q9NRH1 226 aa11.49□□□□□ -0.57
SMARCA4-219ENST00000592604 SMIM20Q8N5G0 67 aa11.49□□□□□ -0.57
SMARCA4-219ENST00000592604 IGLV2-18A0A075B6J9 118 aa11.49□□□□□ -0.57
SMARCA4-219ENST00000592604 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-219ENST00000592604 IGKCP01834 107 aa11.49□□□□□ -0.57
SMARCA4-219ENST00000592604 PRR30Q53SZ7 412 aaPredicted RBP11.49□□□□□ -0.57
SMARCA4-219ENST00000592604 Q8N8P6 123 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms