RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 LINC00052Q96N35 136 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 LYSMD1Q96S90 227 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 AMELYQ99218 206 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 GINS3Q9BRX5 216 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 PBDC1Q9BVG4 233 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 PBOV1Q9GZY1 135 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 TAS2R7Q9NYW3 318 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 SSR3Q9UNL2 185 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 ANKRD31Q8N7Z5 1873 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 PHRF1Q9P1Y6 1649 aaKnown RBP0.81□□□□□ -2.28
SMAD4-207ENST00000589076 PHLPP1O60346 1717 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 CD109Q6YHK3 1445 aa0.81□□□□□ -2.28
SMAD4-207ENST00000589076 MYCBP2O75592 4640 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 CHD9Q3L8U1 2897 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 BAZ1AQ9NRL2 1556 aaPredicted RBP0.8□□□□□ -2.28
SMAD4-207ENST00000589076 IGHV1-58A0A0C4DH39 117 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 RIIAD1A6NNX1 92 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 ERC2-IT1O76042 136 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 IFNA14P01570 189 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 CRHP06850 196 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 PRB3Q04118 309 aaPredicted RBP0.8□□□□□ -2.28
SMAD4-207ENST00000589076 SPRNQ5BIV9 151 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 PATE2Q6UY27 113 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 PLPP5Q8NEB5 264 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 OR5D16Q8NGK9 328 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 ZNF431Q8TF32 576 aaPredicted RBP0.8□□□□□ -2.28
SMAD4-207ENST00000589076 MALSU1Q96EH3 234 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 POPDC3Q9HBV1 291 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 TMEM14CQ9P0S9 112 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 MGAMO43451 1857 aa0.8□□□□□ -2.28
SMAD4-207ENST00000589076 COL1A1P02452 1464 aaPredicted RBP0.8□□□□□ -2.28
SMAD4-207ENST00000589076 ZCCHC11Q5TAX3 1644 aaKnown RBP0.79□□□□□ -2.28
SMAD4-207ENST00000589076 CADP27708 2225 aa0.79□□□□□ -2.28
SMAD4-207ENST00000589076 A0A087WSZ3 146 aa0.79□□□□□ -2.28
SMAD4-207ENST00000589076 NUPR1O60356 82 aa0.79□□□□□ -2.28
SMAD4-207ENST00000589076 TRGC2P03986 189 aa0.79□□□□□ -2.28
SMAD4-207ENST00000589076 CD2P06729 351 aa0.79□□□□□ -2.28
SMAD4-207ENST00000589076 OGNP20774 298 aaKnown RBP0.79□□□□□ -2.28
SMAD4-207ENST00000589076 CDK6Q00534 326 aa0.79□□□□□ -2.28
SMAD4-207ENST00000589076 PSG9Q00887 426 aa0.79□□□□□ -2.28
SMAD4-207ENST00000589076 CDC26Q8NHZ8 85 aa0.79□□□□□ -2.28
SMAD4-207ENST00000589076 POP5Q969H6 163 aaKnown RBP0.79□□□□□ -2.28
SMAD4-207ENST00000589076 PAIP2Q9BPZ3 127 aaKnown RBP0.79□□□□□ -2.28
SMAD4-207ENST00000589076 LAMA5O15230 3695 aa0.79□□□□□ -2.28
SMAD4-207ENST00000589076 FANCMQ8IYD8 2048 aa0.79□□□□□ -2.28
SMAD4-207ENST00000589076 FREM3P0C091 2139 aa0.79□□□□□ -2.28
SMAD4-207ENST00000589076 SYNMO15061 1565 aa0.79□□□□□ -2.28
SMAD4-207ENST00000589076 ASCC3Q8N3C0 2202 aaKnown RBP0.79□□□□□ -2.28
SMAD4-207ENST00000589076 ABCA4P78363 2273 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 B4DSR2 109 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 M0R233 179 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 CXCL8P10145 99 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 RAB5CP51148 216 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 INSL3P51460 131 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 GNG3P63215 75 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 SNCBQ16143 134 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 KRTAP26-1Q6PEX3 210 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 LYG2Q86SG7 212 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 TEN1Q86WV5 123 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 PPTC7Q8NI37 304 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 ZNF714Q96N38 554 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 GPX7Q96SL4 187 aaPredicted RBP0.78□□□□□ -2.28
SMAD4-207ENST00000589076 SS18L2Q9UHA2 77 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 OR52A1Q9UKL2 312 aa0.78□□□□□ -2.28
SMAD4-207ENST00000589076 FRMPD1Q5SYB0 1578 aa0.78□□□□□ -2.29
SMAD4-207ENST00000589076 IGLV3-32A0A0A0MS00 114 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 TRAV5A0A0B4J249 113 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 NCR3O14931 201 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 IGLV1-51P01701 117 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 IFNA4P05014 189 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 PPP1R2P41236 205 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 ARPP19P56211 112 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 TCTAP57738 103 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 KLRD1Q13241 179 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 C1orf134Q5TEV5 83 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 HAGHLQ6PII5 290 aaPredicted RBP0.77□□□□□ -2.29
SMAD4-207ENST00000589076 GRINAQ7Z429 371 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 OR5AS1Q8N127 324 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 NUP35Q8NFH5 326 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 OR4K15Q8NH41 348 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 CHCHD1Q96BP2 118 aaKnown RBP0.77□□□□□ -2.29
SMAD4-207ENST00000589076 ZHX1-C8orf76Q96EF9 292 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 RTL8AQ9BWD3 113 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 MAP1LC3BQ9GZQ8 125 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 SHANK2Q9UPX8 1470 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 NUP210Q8TEM1 1887 aaPredicted RBP0.77□□□□□ -2.29
SMAD4-207ENST00000589076 PTPRDP23468 1912 aa0.77□□□□□ -2.29
SMAD4-207ENST00000589076 ZFC3H1O60293 1989 aaKnown RBP0.77□□□□□ -2.29
SMAD4-207ENST00000589076 ZGRF1Q86YA3 2104 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 ROCK1Q13464 1354 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 F8W1H4 67 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 H3BRM9 83 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 MFSD11O43934 449 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 HIST1H2BKO60814 126 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 HIST1H2BJP06899 126 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 CXCL1P09341 107 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 COX7CP15954 63 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 TMBIM6P55061 237 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 ARPINQ7Z6K5 226 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms