RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ASCL2Q99929 193 aa8.6□□□□□ -1.03
SMAD4-205ENST00000588745 SETD2Q9BYW2 2564 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-205ENST00000588745 C19orf71A6NCJ1 209 aa8.59□□□□□ -1.03
SMAD4-205ENST00000588745 OVOL1O14753 267 aa8.59□□□□□ -1.03
SMAD4-205ENST00000588745 PFN1P07737 140 aaKnown RBP8.59□□□□□ -1.03
SMAD4-205ENST00000588745 NSUN5P1Q3KNT7 163 aa8.59□□□□□ -1.03
SMAD4-205ENST00000588745 SAPCD1Q5SSQ6 148 aa8.59□□□□□ -1.03
SMAD4-205ENST00000588745 NUDT10Q8NFP7 164 aa8.59□□□□□ -1.03
SMAD4-205ENST00000588745 DYNLRB2Q8TF09 96 aa8.59□□□□□ -1.03
SMAD4-205ENST00000588745 NUDT11Q96G61 164 aa8.59□□□□□ -1.03
SMAD4-205ENST00000588745 PRR25Q96S07 402 aa8.59□□□□□ -1.03
SMAD4-205ENST00000588745 NDFIP1Q9BT67 221 aa8.59□□□□□ -1.03
SMAD4-205ENST00000588745 IL36BQ9NZH7 164 aa8.59□□□□□ -1.03
SMAD4-205ENST00000588745 TRBV24-1A0A075B6N3 115 aa8.58□□□□□ -1.04
SMAD4-205ENST00000588745 TGIF2-C20orf24A0A0A6YYL0 155 aa8.58□□□□□ -1.04
SMAD4-205ENST00000588745 ZNF705GA8MUZ8 300 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-205ENST00000588745 K7EQG2 157 aa8.58□□□□□ -1.04
SMAD4-205ENST00000588745 GATCO43716 136 aaKnown RBP8.58□□□□□ -1.04
SMAD4-205ENST00000588745 CXCL1P09341 107 aa8.58□□□□□ -1.04
SMAD4-205ENST00000588745 CT45A10P0DMU9 189 aa8.58□□□□□ -1.04
SMAD4-205ENST00000588745 TFPI2P48307 235 aa8.58□□□□□ -1.04
SMAD4-205ENST00000588745 ERCC8Q13216 396 aa8.58□□□□□ -1.04
SMAD4-205ENST00000588745 TMEM78Q5T7P6 136 aa8.58□□□□□ -1.04
SMAD4-205ENST00000588745 LINC00322Q6ZN03 302 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-205ENST00000588745 C9orf47Q6ZRZ4 202 aa8.58□□□□□ -1.04
SMAD4-205ENST00000588745 COX8CQ7Z4L0 72 aa8.58□□□□□ -1.04
SMAD4-205ENST00000588745 WFDC3Q8IUB2 231 aa8.58□□□□□ -1.04
SMAD4-205ENST00000588745 C8orf49Q96NF6 230 aa8.58□□□□□ -1.04
SMAD4-205ENST00000588745 TRAV2A0A0B4J234 112 aa8.57□□□□□ -1.04
SMAD4-205ENST00000588745 A0A1W2PPQ1 181 aa8.57□□□□□ -1.04
SMAD4-205ENST00000588745 NPIPB6E9PJ23 425 aa8.57□□□□□ -1.04
SMAD4-205ENST00000588745 RAB5AP20339 215 aa8.57□□□□□ -1.04
SMAD4-205ENST00000588745 ZNF138P52744 262 aa8.57□□□□□ -1.04
SMAD4-205ENST00000588745 SNRPD3P62318 126 aaKnown RBP8.57□□□□□ -1.04
SMAD4-205ENST00000588745 PAFAH1B2P68402 229 aa8.57□□□□□ -1.04
SMAD4-205ENST00000588745 OR10J6PQ8NGY7 276 aa8.57□□□□□ -1.04
SMAD4-205ENST00000588745 PYGO2Q9BRQ0 406 aa8.57□□□□□ -1.04
SMAD4-205ENST00000588745 GPR61Q9BZJ8 451 aa8.57□□□□□ -1.04
SMAD4-205ENST00000588745 AGPAT4-IT1Q9H0P7 198 aa8.57□□□□□ -1.04
SMAD4-205ENST00000588745 RPP21Q9H633 154 aaKnown RBP8.57□□□□□ -1.04
SMAD4-205ENST00000588745 PPP1R14DQ9NXH3 145 aa8.57□□□□□ -1.04
SMAD4-205ENST00000588745 SIGLEC8Q9NYZ4 499 aa8.57□□□□□ -1.04
SMAD4-205ENST00000588745 TMA7Q9Y2S6 64 aaKnown RBP8.57□□□□□ -1.04
SMAD4-205ENST00000588745 P01737 135 aa8.56□□□□□ -1.04
SMAD4-205ENST00000588745 ZNF688P0C7X2 276 aa8.56□□□□□ -1.04
SMAD4-205ENST00000588745 DEFB114Q30KQ6 69 aa8.56□□□□□ -1.04
SMAD4-205ENST00000588745 CT83Q5H943 113 aa8.56□□□□□ -1.04
SMAD4-205ENST00000588745 RBPMS2Q6ZRY4 209 aaKnown RBP8.56□□□□□ -1.04
SMAD4-205ENST00000588745 TMEM61Q8N0U2 210 aa8.56□□□□□ -1.04
SMAD4-205ENST00000588745 OR8A1Q8NGG7 326 aa8.56□□□□□ -1.04
SMAD4-205ENST00000588745 DAZAP1Q96EP5 407 aaKnown RBP8.56□□□□□ -1.04
SMAD4-205ENST00000588745 FAM210BQ96KR6 192 aa8.56□□□□□ -1.04
SMAD4-205ENST00000588745 TRAV9-1A0A075B6T8 112 aa8.55□□□□□ -1.04
SMAD4-205ENST00000588745 SMIM27A0A1W2PRY6 76 aa8.55□□□□□ -1.04
SMAD4-205ENST00000588745 F6UB75 175 aa8.55□□□□□ -1.04
SMAD4-205ENST00000588745 CA1P00915 261 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-205ENST00000588745 ZNF705DP0CH99 300 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-205ENST00000588745 ZNF705BP0CI00 300 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-205ENST00000588745 CRIP1P50238 77 aa8.55□□□□□ -1.04
SMAD4-205ENST00000588745 FAM3BP58499 235 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-205ENST00000588745 DEFB1P60022 68 aa8.55□□□□□ -1.04
SMAD4-205ENST00000588745 HIST1H1AQ02539 215 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-205ENST00000588745 SMUG1Q53HV7 270 aa8.55□□□□□ -1.04
SMAD4-205ENST00000588745 PSMG4Q5JS54 123 aa8.55□□□□□ -1.04
SMAD4-205ENST00000588745 OR4B1Q8NGF8 309 aa8.55□□□□□ -1.04
SMAD4-205ENST00000588745 BTF3L4Q96K17 158 aa8.55□□□□□ -1.04
SMAD4-205ENST00000588745 LENEPQ9Y5L5 61 aa8.55□□□□□ -1.04
SMAD4-205ENST00000588745 TRAV25A0A0B4J276 109 aa8.54□□□□□ -1.04
SMAD4-205ENST00000588745 SH2D1AO60880 128 aa8.54□□□□□ -1.04
SMAD4-205ENST00000588745 CD300EQ496F6 205 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-205ENST00000588745 FAM162BQ5T6X4 162 aa8.54□□□□□ -1.04
SMAD4-205ENST00000588745 TSKUQ8WUA8 353 aa8.54□□□□□ -1.04
SMAD4-205ENST00000588745 LINC00477Q96M19 166 aa8.54□□□□□ -1.04
SMAD4-205ENST00000588745 OR4C46A6NHA9 309 aa8.53□□□□□ -1.04
SMAD4-205ENST00000588745 PF4P02776 101 aa8.53□□□□□ -1.04
SMAD4-205ENST00000588745 TYMSP04818 313 aa8.53□□□□□ -1.04
SMAD4-205ENST00000588745 RPS10P46783 165 aaKnown RBP8.53□□□□□ -1.04
SMAD4-205ENST00000588745 ZNF80P51504 273 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-205ENST00000588745 TCL1AP56279 114 aa8.53□□□□□ -1.04
SMAD4-205ENST00000588745 OR2D3Q8NGH3 330 aa8.53□□□□□ -1.04
SMAD4-205ENST00000588745 SPAG8Q99932 426 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-205ENST00000588745 CITED1Q99966 193 aa8.53□□□□□ -1.04
SMAD4-205ENST00000588745 TRBV7-9A0A0J9YWB2 115 aa8.52□□□□□ -1.05
SMAD4-205ENST00000588745 A0A0J9YX75 114 aa8.52□□□□□ -1.05
SMAD4-205ENST00000588745 A8MWL6 223 aa8.52□□□□□ -1.05
SMAD4-205ENST00000588745 SAP30O75446 220 aa8.52□□□□□ -1.05
SMAD4-205ENST00000588745 LINC00482Q8N8I6 264 aa8.52□□□□□ -1.05
SMAD4-205ENST00000588745 FAM19A4Q96LR4 140 aa8.52□□□□□ -1.05
SMAD4-205ENST00000588745 NEU1Q99519 415 aa8.52□□□□□ -1.05
SMAD4-205ENST00000588745 GFRA4Q9GZZ7 299 aa8.52□□□□□ -1.05
SMAD4-205ENST00000588745 SRD5A3Q9H8P0 318 aa8.52□□□□□ -1.05
SMAD4-205ENST00000588745 NAT8BQ9UHF3 227 aa8.52□□□□□ -1.05
SMAD4-205ENST00000588745 FAM231BA6NCW3 169 aa8.51□□□□□ -1.05
SMAD4-205ENST00000588745 RPL19P84098 196 aaKnown RBP8.51□□□□□ -1.05
SMAD4-205ENST00000588745 KRTAP24-1Q3LI83 254 aa8.51□□□□□ -1.05
SMAD4-205ENST00000588745 GDF5OSQ5U4N7 250 aa8.51□□□□□ -1.05
SMAD4-205ENST00000588745 EBLN2Q6P2I7 272 aa8.51□□□□□ -1.05
SMAD4-205ENST00000588745 FOXI2Q6ZQN5 318 aa8.51□□□□□ -1.05
SMAD4-205ENST00000588745 SAV1Q9H4B6 383 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-205ENST00000588745 JMJD1CQ15652 2540 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms