RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 IGHG4P01861 327 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 PRR20EP86478 221 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 PRR20CP86479 221 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 PRR20DP86480 221 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 PRR20BP86481 221 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 PRR20AP86496 221 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 TMEM105Q8N8V8 129 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 VOPP1Q96AW1 172 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 ZNF747Q9BV97 191 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 A0A0G2JNJ9 132 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 J3QQQ9 107 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 Q9UFV3 132 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 GVINP1Q7Z2Y8 2422 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 K7EMI3 77 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 ANKRD29Q8N6D5 301 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 ZC2HC1AQ96GY0 325 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 ABCA1O95477 2261 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 SSC4DQ8WTU2 575 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 SPTBN1Q01082 2364 aaKnown RBP10.43□□□□□ -0.74
RNF43-208ENST00000584437 ZDBF2Q9HCK1 2354 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 TRAV13-2A0A0B4J235 113 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 SAA4P35542 130 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 LTAP01374 205 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 MSRB2Q9Y3D2 182 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 IGHV1OR15-1A0A075B7D0 117 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 BRD3OSQ6XYD6 125 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 TRBV25-1A0A075B6N4 114 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 IGHV2-70DA0A0C4DH43 119 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 COL8A2P25067 703 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 POU2AF1Q16633 256 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 C8orf86Q6ZUL3 223 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 RNF166Q96A37 237 aaPredicted RBP10.43□□□□□ -0.74
RNF43-208ENST00000584437 UBE2E2Q96LR5 201 aa10.43□□□□□ -0.74
RNF43-208ENST00000584437 ANK1P16157 1881 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 K7ERJ3 54 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 C17orf58Q2M2W7 97 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 CASP8AP2Q9UKL3 1982 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 PTPRDP23468 1912 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 K7EN84 100 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 DEFB131AP59861 70 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 WT1-ASQ06250 92 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 NSUN5P1Q3KNT7 163 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 UBE2E1P51965 193 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 C11orf44Q8N8P7 122 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 ATP6V0E1O15342 81 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 GAGE5Q13069 117 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 GAGE6Q13070 117 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 FANCMQ8IYD8 2048 aa10.42□□□□□ -0.74
RNF43-208ENST00000584437 C15orf65H3BRN8 121 aa10.41□□□□□ -0.74
RNF43-208ENST00000584437 ANXA2RQ3ZCQ2 193 aa10.41□□□□□ -0.74
RNF43-208ENST00000584437 C15orf53Q8NAA6 179 aa10.41□□□□□ -0.74
RNF43-208ENST00000584437 TRAV26-2A0A0B4J265 109 aa10.41□□□□□ -0.74
RNF43-208ENST00000584437 RPL35AP18077 110 aaKnown RBP10.41□□□□□ -0.74
RNF43-208ENST00000584437 ZNRD1Q9P1U0 126 aa10.41□□□□□ -0.74
RNF43-208ENST00000584437 DKK2Q9UBU2 259 aa10.41□□□□□ -0.74
RNF43-208ENST00000584437 AMTNQ6UX39 209 aa10.41□□□□□ -0.74
RNF43-208ENST00000584437 PHF3Q92576 2039 aaKnown RBP10.41□□□□□ -0.74
RNF43-208ENST00000584437 IGLV3-1P01715 115 aa10.41□□□□□ -0.74
RNF43-208ENST00000584437 RPL32P62910 135 aaKnown RBP10.41□□□□□ -0.74
RNF43-208ENST00000584437 NTN5Q8WTR8 489 aaPredicted RBP10.41□□□□□ -0.74
RNF43-208ENST00000584437 SIP14410 1827 aa10.4□□□□□ -0.74
RNF43-208ENST00000584437 HAMPP81172 84 aa10.4□□□□□ -0.74
RNF43-208ENST00000584437 EP300Q09472 2414 aaPredicted RBP10.4□□□□□ -0.74
RNF43-208ENST00000584437 NDUFA4O00483 81 aa10.4□□□□□ -0.74
RNF43-208ENST00000584437 SYNJ2BPP57105 145 aa10.4□□□□□ -0.74
RNF43-208ENST00000584437 TMEM126AQ9H061 195 aa10.4□□□□□ -0.74
RNF43-208ENST00000584437 DOPEY2Q9Y3R5 2298 aa10.4□□□□□ -0.74
RNF43-208ENST00000584437 ACYP1P07311 99 aa10.4□□□□□ -0.74
RNF43-208ENST00000584437 IGLC1P0CG04 106 aa10.4□□□□□ -0.74
RNF43-208ENST00000584437 CFC1BP0CG36 223 aa10.4□□□□□ -0.74
RNF43-208ENST00000584437 CFC1P0CG37 223 aa10.4□□□□□ -0.74
RNF43-208ENST00000584437 ZNF493Q6ZR52 646 aa10.4□□□□□ -0.74
RNF43-208ENST00000584437 KLHL30-AS1Q8NEE0 82 aa10.4□□□□□ -0.74
RNF43-208ENST00000584437 HERVK_113P63121 156 aa10.4□□□□□ -0.75
RNF43-208ENST00000584437 Q6ZS92 163 aa10.4□□□□□ -0.75
RNF43-208ENST00000584437 CCL25O15444 150 aa10.39□□□□□ -0.75
RNF43-208ENST00000584437 CDPF1Q6NVV7 123 aa10.39□□□□□ -0.75
RNF43-208ENST00000584437 KNCNA6PVL3 124 aa10.39□□□□□ -0.75
RNF43-208ENST00000584437 SPINK13Q1W4C9 94 aa10.39□□□□□ -0.75
RNF43-208ENST00000584437 WDR86Q86TI4 376 aa10.39□□□□□ -0.75
RNF43-208ENST00000584437 TMEM243Q9BU79 118 aa10.39□□□□□ -0.75
RNF43-208ENST00000584437 PFN2P35080 140 aa10.39□□□□□ -0.75
RNF43-208ENST00000584437 LINC01545Q5VT33 79 aa10.39□□□□□ -0.75
RNF43-208ENST00000584437 Q6ZR03 302 aa10.39□□□□□ -0.75
RNF43-208ENST00000584437 SHISA9B4DS77 424 aa10.39□□□□□ -0.75
RNF43-208ENST00000584437 E7EQL1 145 aa10.39□□□□□ -0.75
RNF43-208ENST00000584437 WIPF3A6NGB9 483 aa10.39□□□□□ -0.75
RNF43-208ENST00000584437 PI4KAP42356 2102 aa10.38□□□□□ -0.75
RNF43-208ENST00000584437 POLEQ07864 2286 aa10.38□□□□□ -0.75
RNF43-208ENST00000584437 TEX36Q5VZQ5 186 aa10.38□□□□□ -0.75
RNF43-208ENST00000584437 DOCK9Q9BZ29 2069 aa10.38□□□□□ -0.75
RNF43-208ENST00000584437 RSPO1Q2MKA7 263 aaPredicted RBP10.38□□□□□ -0.75
RNF43-208ENST00000584437 Q8NFD4 153 aa10.38□□□□□ -0.75
RNF43-208ENST00000584437 CRLF1O75462 422 aa10.37□□□□□ -0.75
RNF43-208ENST00000584437 RHOHQ15669 191 aa10.37□□□□□ -0.75
RNF43-208ENST00000584437 DSCR8Q96T75 97 aa10.37□□□□□ -0.75
RNF43-208ENST00000584437 HEATR1Q9H583 2144 aaKnown RBP10.37□□□□□ -0.75
RNF43-208ENST00000584437 CITED2Q99967 270 aaPredicted RBP10.37□□□□□ -0.75
RNF43-208ENST00000584437 SCN5AQ14524 2016 aa10.37□□□□□ -0.75
RNF43-208ENST00000584437 LOXP28300 417 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms