RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 HIST2H2BEQ16778 126 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.13□□□□□ -0.63
MKS1-211ENST00000581761 REC114Q7Z4M0 266 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 OR4B1Q8NGF8 309 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 TSKUQ8WUA8 353 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 HIST1H2BHQ93079 126 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 HIST1H2BNQ99877 126 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 HIST1H2BMQ99879 126 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 TRAPPC1Q9Y5R8 145 aa11.13□□□□□ -0.63
MKS1-211ENST00000581761 SPINK4O60575 86 aa11.12□□□□□ -0.63
MKS1-211ENST00000581761 CT45A10P0DMU9 189 aa11.12□□□□□ -0.63
MKS1-211ENST00000581761 NDUFA6P56556 154 aa11.12□□□□□ -0.63
MKS1-211ENST00000581761 RPL11P62913 178 aaKnown RBP11.12□□□□□ -0.63
MKS1-211ENST00000581761 FABP9Q0Z7S8 132 aa11.12□□□□□ -0.63
MKS1-211ENST00000581761 KRTAP24-1Q3LI83 254 aa11.12□□□□□ -0.63
MKS1-211ENST00000581761 CT83Q5H943 113 aa11.12□□□□□ -0.63
MKS1-211ENST00000581761 SAPCD1Q5SSQ6 148 aa11.12□□□□□ -0.63
MKS1-211ENST00000581761 ZNF418Q8TF45 676 aaPredicted RBP11.12□□□□□ -0.63
MKS1-211ENST00000581761 NDFIP1Q9BT67 221 aa11.12□□□□□ -0.63
MKS1-211ENST00000581761 NAT8BQ9UHF3 227 aa11.12□□□□□ -0.63
MKS1-211ENST00000581761 RBAKDNA6NC62 111 aa11.11□□□□□ -0.63
MKS1-211ENST00000581761 C5orf52A6NGY3 159 aa11.11□□□□□ -0.63
MKS1-211ENST00000581761 A8MWL6 223 aa11.11□□□□□ -0.63
MKS1-211ENST00000581761 TCF21O43680 179 aa11.11□□□□□ -0.63
MKS1-211ENST00000581761 RNASE1P07998 156 aaKnown RBP11.11□□□□□ -0.63
MKS1-211ENST00000581761 EDN2P20800 178 aa11.11□□□□□ -0.63
MKS1-211ENST00000581761 ERCC8Q13216 396 aa11.11□□□□□ -0.63
MKS1-211ENST00000581761 KHDC1LQ5JSQ8 128 aa11.11□□□□□ -0.63
MKS1-211ENST00000581761 MRPL54Q6P161 138 aaKnown RBP11.11□□□□□ -0.63
MKS1-211ENST00000581761 C18orf65Q6ZTR6 163 aa11.11□□□□□ -0.63
MKS1-211ENST00000581761 TCF24Q7RTU0 167 aa11.11□□□□□ -0.63
MKS1-211ENST00000581761 OR2D3Q8NGH3 330 aa11.11□□□□□ -0.63
MKS1-211ENST00000581761 Q8TAT8 98 aa11.11□□□□□ -0.63
MKS1-211ENST00000581761 PRR25Q96S07 402 aa11.11□□□□□ -0.63
MKS1-211ENST00000581761 TMEM213A2RRL7 107 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 NPIPB6E9PJ23 425 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 LGALS9O00182 355 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 SOCS3O14543 225 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 CBLN1P23435 193 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 HOXD3P31249 432 aaPredicted RBP11.1□□□□□ -0.63
MKS1-211ENST00000581761 SYNJ2BPP57105 145 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 HILS1P60008 231 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 COX19Q49B96 90 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 ZNF738Q8NE65 137 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 NUP35Q8NFH5 326 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 C20orf173Q96LM9 149 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 NEU1Q99519 415 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 NRN1Q9NPD7 142 aa11.1□□□□□ -0.63
MKS1-211ENST00000581761 TENM1Q9UKZ4 2725 aa11.09□□□□□ -0.63
MKS1-211ENST00000581761 IGKV3-7A0A075B6H7 116 aa11.09□□□□□ -0.63
MKS1-211ENST00000581761 A8MWP6 167 aa11.09□□□□□ -0.63
MKS1-211ENST00000581761 SNURFLB1AK76 121 aa11.09□□□□□ -0.63
MKS1-211ENST00000581761 CDX1P47902 265 aaPredicted RBP11.09□□□□□ -0.63
MKS1-211ENST00000581761 CRIP1P50238 77 aa11.09□□□□□ -0.63
MKS1-211ENST00000581761 WDR73Q6P4I2 378 aa11.09□□□□□ -0.63
MKS1-211ENST00000581761 C4orf3Q8WVX3 66 aa11.09□□□□□ -0.63
MKS1-211ENST00000581761 SELENOKQ9Y6D0 94 aa11.09□□□□□ -0.63
MKS1-211ENST00000581761 HIGD1CA8MV81 97 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 LINC01619G3V211 115 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 UBE2CO00762 179 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 SH2D1AO60880 128 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 FRMD6-AS1P0C7T7 363 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 DEFB136Q30KP8 78 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 SMUG1Q53HV7 270 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 TCTEX1D4Q5JR98 221 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 TMEM78Q5T7P6 136 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 COX8CQ7Z4L0 72 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 DPF1Q92782 380 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 GPR61Q9BZJ8 451 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 GFRA4Q9GZZ7 299 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 AGPAT4-IT1Q9H0P7 198 aa11.08□□□□□ -0.64
MKS1-211ENST00000581761 MRPL18Q9H0U6 180 aaKnown RBP11.08□□□□□ -0.64
MKS1-211ENST00000581761 OVOL1O14753 267 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 GZMBP10144 247 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 AKR1D1P51857 326 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 ZNF138P52744 262 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 SLURP1P55000 103 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 RAB4BP61018 213 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 FAM162BQ5T6X4 162 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 SAMD13Q5VXD3 122 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 KLHL30-AS1Q8NEE0 82 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 OR1N2Q8NGR9 330 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 PGLYRP4Q96LB8 373 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 GNB1LQ9BYB4 327 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 C16orf95Q9H693 158 aa11.07□□□□□ -0.64
MKS1-211ENST00000581761 TMEM189A5PLL7 270 aa11.06□□□□□ -0.64
MKS1-211ENST00000581761 FAM231BA6NCW3 169 aa11.06□□□□□ -0.64
MKS1-211ENST00000581761 M0QZ24 198 aa11.06□□□□□ -0.64
MKS1-211ENST00000581761 MT-ND6P03923 174 aa11.06□□□□□ -0.64
MKS1-211ENST00000581761 HOXA5P20719 270 aa11.06□□□□□ -0.64
MKS1-211ENST00000581761 ID1P41134 155 aa11.06□□□□□ -0.64
MKS1-211ENST00000581761 KLF5Q13887 457 aaPredicted RBP11.06□□□□□ -0.64
MKS1-211ENST00000581761 TMEM136Q6ZRR5 245 aa11.06□□□□□ -0.64
MKS1-211ENST00000581761 C9orf47Q6ZRZ4 202 aa11.06□□□□□ -0.64
MKS1-211ENST00000581761 WFDC3Q8IUB2 231 aa11.06□□□□□ -0.64
MKS1-211ENST00000581761 OR11H1Q8NG94 326 aa11.06□□□□□ -0.64
MKS1-211ENST00000581761 GTSF1Q8WW33 167 aa11.06□□□□□ -0.64
MKS1-211ENST00000581761 JMJD8Q96S16 334 aa11.06□□□□□ -0.64
MKS1-211ENST00000581761 XKRY2A2RUG3 117 aa11.05□□□□□ -0.64
MKS1-211ENST00000581761 C2orf70A6NJV1 201 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 230.9 ms