RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 DSCR8Q96T75 97 aa11.6□□□□□ -0.55
CSNK1D-217ENST00000581241 DKK2Q9UBU2 259 aa11.6□□□□□ -0.55
CSNK1D-217ENST00000581241 LINC00311Q8N616 119 aa11.6□□□□□ -0.55
CSNK1D-217ENST00000581241 C15orf65H3BRN8 121 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 TMEM243Q9BU79 118 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 J3QQQ9 107 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 NDUFA4O00483 81 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 ZNF134P52741 427 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 TEX36Q5VZQ5 186 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 VOPP1Q96AW1 172 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 MYLKQ15746 1914 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 CRLF1O75462 422 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 SUMO4Q6EEV6 95 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 ZNF561-AS1K7EIQ3 104 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 DEFB130BP0DP73 79 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 DEFB130AP0DP74 79 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 HERVK_113P63121 156 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 SBF1O95248 1867 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 PTPRDP23468 1912 aa11.59□□□□□ -0.55
CSNK1D-217ENST00000581241 LTBP1Q14766 1721 aa11.58□□□□□ -0.55
CSNK1D-217ENST00000581241 KIAA0100Q14667 2235 aaKnown RBP11.58□□□□□ -0.56
CSNK1D-217ENST00000581241 KIR2DL5BA0A0G2JN68 375 aa11.58□□□□□ -0.56
CSNK1D-217ENST00000581241 KIR2DL5BA0A0G2JPC4 375 aa11.58□□□□□ -0.56
CSNK1D-217ENST00000581241 KIR2DL5AQ8N109 375 aa11.58□□□□□ -0.56
CSNK1D-217ENST00000581241 RALGAPA1Q6GYQ0 2036 aa11.58□□□□□ -0.56
CSNK1D-217ENST00000581241 ASPHD1Q5U4P2 390 aa11.58□□□□□ -0.56
CSNK1D-217ENST00000581241 CFHR3Q02985 330 aa11.58□□□□□ -0.56
CSNK1D-217ENST00000581241 SCRT2Q9NQ03 307 aa11.57□□□□□ -0.56
CSNK1D-217ENST00000581241 HAMPP81172 84 aa11.57□□□□□ -0.56
CSNK1D-217ENST00000581241 BPESC1Q9GZL8 116 aa11.57□□□□□ -0.56
CSNK1D-217ENST00000581241 NKAPP1Q8N9T2 125 aa11.57□□□□□ -0.56
CSNK1D-217ENST00000581241 C15orf53Q8NAA6 179 aa11.57□□□□□ -0.56
CSNK1D-217ENST00000581241 SCN5AQ14524 2016 aa11.57□□□□□ -0.56
CSNK1D-217ENST00000581241 IGHV3-38A0A0C4DH36 116 aa11.56□□□□□ -0.56
CSNK1D-217ENST00000581241 Q6ZR03 302 aa11.56□□□□□ -0.56
CSNK1D-217ENST00000581241 CDPF1Q6NVV7 123 aa11.56□□□□□ -0.56
CSNK1D-217ENST00000581241 ZNRF2Q8NHG8 242 aa11.56□□□□□ -0.56
CSNK1D-217ENST00000581241 XCL2Q9UBD3 114 aa11.56□□□□□ -0.56
CSNK1D-217ENST00000581241 TRPM7Q96QT4 1865 aa11.56□□□□□ -0.56
CSNK1D-217ENST00000581241 WT1-ASQ06250 92 aa11.56□□□□□ -0.56
CSNK1D-217ENST00000581241 TP53BP1Q12888 1972 aaPredicted RBP11.56□□□□□ -0.56
CSNK1D-217ENST00000581241 GNLYP22749 145 aa11.56□□□□□ -0.56
CSNK1D-217ENST00000581241 TPSG1Q9NRR2 321 aa11.56□□□□□ -0.56
CSNK1D-217ENST00000581241 ZNF747Q9BV97 191 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 GAGE6Q13070 117 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 DUX4L9Q6RFH8 374 aaPredicted RBP11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 DOCK6Q96HP0 2047 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 TRAV12-2A0A075B6T6 113 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 PRR20EP86478 221 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 PRR20CP86479 221 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 PRR20DP86480 221 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 PRR20BP86481 221 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 PRR20AP86496 221 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 SLX1AQ9BQ83 275 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 IGHV1-69DA0A0B4J2H0 117 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 IGHV2-70DA0A0C4DH43 119 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 K7EMI3 77 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 LY6HO94772 140 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 IGHV1-69P01742 117 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 Q6ZS92 163 aa11.55□□□□□ -0.56
CSNK1D-217ENST00000581241 GAGE7O76087 117 aa11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 GAGE12FP0CL80 117 aa11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 GAGE12GP0CL81 117 aa11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 GAGE12IP0CL82 117 aa11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 TRAV25A0A0B4J276 109 aa11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 IGLV3-1P01715 115 aa11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 IL15RAQ13261 267 aa11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 DEFB125Q8N687 156 aa11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 NTN5Q8WTR8 489 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 CASP8AP2Q9UKL3 1982 aa11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 KIF26BQ2KJY2 2108 aa11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 G3V318 75 aa11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 GATA3P23771 443 aa11.54□□□□□ -0.56
CSNK1D-217ENST00000581241 FREM3P0C091 2139 aa11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 PLXNA4Q9HCM2 1894 aa11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 CFC1BP0CG36 223 aa11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 CFC1P0CG37 223 aa11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 TCTEX1D4Q5JR98 221 aa11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 AMTNQ6UX39 209 aa11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 IGLC1P0CG04 106 aa11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 CEACAM8P31997 349 aaPredicted RBP11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 LOXP28300 417 aaPredicted RBP11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 RHOHQ15669 191 aa11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 SS18L2Q9UHA2 77 aa11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 RNF114Q9Y508 228 aa11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 RBAKDNA6NC62 111 aa11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 DAD1P61803 113 aa11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 KLF2Q9Y5W3 355 aaPredicted RBP11.53□□□□□ -0.56
CSNK1D-217ENST00000581241 SHISA9B4DS77 424 aa11.52□□□□□ -0.56
CSNK1D-217ENST00000581241 ACYP1P07311 99 aa11.52□□□□□ -0.56
CSNK1D-217ENST00000581241 CCL25O15444 150 aa11.52□□□□□ -0.56
CSNK1D-217ENST00000581241 ZNF493Q6ZR52 646 aa11.52□□□□□ -0.56
CSNK1D-217ENST00000581241 PROK2Q9HC23 129 aa11.52□□□□□ -0.56
CSNK1D-217ENST00000581241 ZNF503-AS2A6NEH8 195 aa11.52□□□□□ -0.57
CSNK1D-217ENST00000581241 NXPH4O95158 308 aa11.52□□□□□ -0.57
CSNK1D-217ENST00000581241 TMEM258P61165 79 aa11.52□□□□□ -0.57
CSNK1D-217ENST00000581241 MSMBP08118 114 aa11.52□□□□□ -0.57
CSNK1D-217ENST00000581241 CFHR4Q92496 578 aa11.52□□□□□ -0.57
CSNK1D-217ENST00000581241 TINCRA0A1B0GVN0 87 aa11.52□□□□□ -0.57
CSNK1D-217ENST00000581241 CRYBA4P53673 196 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms