RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 TXNDC17Q9BRA2 123 aa12.23□□□□□ -0.45
CLN6-208ENST00000567060 KRTAP17-1Q9BYP8 105 aa12.23□□□□□ -0.45
CLN6-208ENST00000567060 BOLA1Q9Y3E2 137 aa12.23□□□□□ -0.45
CLN6-208ENST00000567060 LENEPQ9Y5L5 61 aa12.23□□□□□ -0.45
CLN6-208ENST00000567060 ZNF705EA8MWA4 302 aaPredicted RBP12.22□□□□□ -0.45
CLN6-208ENST00000567060 DIRC3C9JPN6 131 aa12.22□□□□□ -0.45
CLN6-208ENST00000567060 NMBP08949 121 aa12.22□□□□□ -0.45
CLN6-208ENST00000567060 TAGLN2P37802 199 aaKnown RBP12.22□□□□□ -0.45
CLN6-208ENST00000567060 ALKAL2Q6UX46 152 aa12.22□□□□□ -0.45
CLN6-208ENST00000567060 RNF183Q96D59 192 aa12.22□□□□□ -0.45
CLN6-208ENST00000567060 MANBALQ9NQG1 85 aa12.22□□□□□ -0.45
CLN6-208ENST00000567060 FAM74A7A6NL05 159 aa12.21□□□□□ -0.45
CLN6-208ENST00000567060 PRAC2D3DTV9 90 aa12.21□□□□□ -0.45
CLN6-208ENST00000567060 DEFB1P60022 68 aa12.21□□□□□ -0.45
CLN6-208ENST00000567060 SUMO1P63165 101 aaKnown RBP12.21□□□□□ -0.45
CLN6-208ENST00000567060 TMEM78Q5T7P6 136 aa12.21□□□□□ -0.45
CLN6-208ENST00000567060 HIST1H2BAQ96A08 127 aa12.21□□□□□ -0.45
CLN6-208ENST00000567060 C20orf144Q9BQM9 153 aa12.21□□□□□ -0.45
CLN6-208ENST00000567060 TMPRSS5Q9H3S3 457 aa12.21□□□□□ -0.45
CLN6-208ENST00000567060 GGTLC3B5MD39 225 aa12.2□□□□□ -0.46
CLN6-208ENST00000567060 F6UZH7 168 aa12.2□□□□□ -0.46
CLN6-208ENST00000567060 SPRY2O43597 315 aa12.2□□□□□ -0.46
CLN6-208ENST00000567060 IFNA7P01567 189 aa12.2□□□□□ -0.46
CLN6-208ENST00000567060 GIG44P09565 113 aaPredicted RBP12.2□□□□□ -0.46
CLN6-208ENST00000567060 LEPP41159 167 aa12.2□□□□□ -0.46
CLN6-208ENST00000567060 CDKN1BP46527 198 aa12.2□□□□□ -0.46
CLN6-208ENST00000567060 TEX261Q6UWH6 196 aa12.2□□□□□ -0.46
CLN6-208ENST00000567060 EPDR1Q9UM22 224 aa12.2□□□□□ -0.46
CLN6-208ENST00000567060 IFNA1P01562 189 aa12.19□□□□□ -0.46
CLN6-208ENST00000567060 IGKV3-20P01619 116 aa12.19□□□□□ -0.46
CLN6-208ENST00000567060 TCRAP04437 139 aa12.19□□□□□ -0.46
CLN6-208ENST00000567060 CSNK1G2-AS1Q8NCQ2 148 aa12.19□□□□□ -0.46
CLN6-208ENST00000567060 IGF2BP2-AS1Q96M15 143 aa12.19□□□□□ -0.46
CLN6-208ENST00000567060 ATG101Q9BSB4 218 aa12.19□□□□□ -0.46
CLN6-208ENST00000567060 ZNF492Q9P255 531 aa12.19□□□□□ -0.46
CLN6-208ENST00000567060 INSP01308 110 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 ZNF705DP0CH99 300 aaPredicted RBP12.18□□□□□ -0.46
CLN6-208ENST00000567060 ZNF705BP0CI00 300 aaPredicted RBP12.18□□□□□ -0.46
CLN6-208ENST00000567060 CRISP2P16562 243 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 ZNF138P52744 262 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 DEFB135Q30KP9 77 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 ZFAND6Q6FIF0 208 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 CCDC28AQ8IWP9 274 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 TMEM256Q8N2U0 113 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 CYB561D1Q8N8Q1 229 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 LYPD6BQ8NI32 183 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 FAM19A4Q96LR4 140 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 OVOL2Q9BRP0 275 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 AGPAT4-IT1Q9H0P7 198 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 SLC35B3Q9H1N7 401 aa12.18□□□□□ -0.46
CLN6-208ENST00000567060 YTHDF2Q9Y5A9 579 aaKnown RBP12.18□□□□□ -0.46
CLN6-208ENST00000567060 IGKV2-40A0A087WW87 121 aaPredicted RBP12.17□□□□□ -0.46
CLN6-208ENST00000567060 IGKV2D-40P01614 121 aaPredicted RBP12.17□□□□□ -0.46
CLN6-208ENST00000567060 CT45A10P0DMU9 189 aa12.17□□□□□ -0.46
CLN6-208ENST00000567060 UBE2G2P60604 165 aa12.17□□□□□ -0.46
CLN6-208ENST00000567060 CST9LP1Q5W188 147 aa12.17□□□□□ -0.46
CLN6-208ENST00000567060 TMEM75Q8N9X5 138 aa12.17□□□□□ -0.46
CLN6-208ENST00000567060 NEU1Q99519 415 aa12.17□□□□□ -0.46
CLN6-208ENST00000567060 XCL2Q9UBD3 114 aa12.17□□□□□ -0.46
CLN6-208ENST00000567060 GOLT1BQ9Y3E0 138 aa12.17□□□□□ -0.46
CLN6-208ENST00000567060 SMIM9A6NGZ8 99 aa12.16□□□□□ -0.46
CLN6-208ENST00000567060 PAGE4O60829 102 aa12.16□□□□□ -0.46
CLN6-208ENST00000567060 SPINK13Q1W4C9 94 aa12.16□□□□□ -0.46
CLN6-208ENST00000567060 ZNF705AQ6ZN79 300 aaPredicted RBP12.16□□□□□ -0.46
CLN6-208ENST00000567060 GOLT1AQ6ZVE7 132 aa12.16□□□□□ -0.46
CLN6-208ENST00000567060 ZNF680Q8NEM1 530 aa12.16□□□□□ -0.46
CLN6-208ENST00000567060 VGLL1Q99990 258 aa12.16□□□□□ -0.46
CLN6-208ENST00000567060 KLLNB2CW77 178 aa12.15□□□□□ -0.46
CLN6-208ENST00000567060 S100A9P06702 114 aaKnown RBP12.15□□□□□ -0.46
CLN6-208ENST00000567060 RARRES2Q99969 163 aa12.15□□□□□ -0.46
CLN6-208ENST00000567060 NDFIP1Q9BT67 221 aa12.15□□□□□ -0.46
CLN6-208ENST00000567060 C11orf94C9JXX5 98 aa12.14□□□□□ -0.47
CLN6-208ENST00000567060 M0R2Z0 102 aa12.14□□□□□ -0.47
CLN6-208ENST00000567060 PEX7O00628 323 aa12.14□□□□□ -0.47
CLN6-208ENST00000567060 CRXO43186 299 aaPredicted RBP12.14□□□□□ -0.47
CLN6-208ENST00000567060 NDUFS6O75380 124 aaKnown RBP12.14□□□□□ -0.47
CLN6-208ENST00000567060 MIFP14174 115 aa12.14□□□□□ -0.47
CLN6-208ENST00000567060 ERCC8Q13216 396 aa12.14□□□□□ -0.47
CLN6-208ENST00000567060 OR11H2Q8NH07 326 aa12.14□□□□□ -0.47
CLN6-208ENST00000567060 GNG13Q9P2W3 67 aa12.14□□□□□ -0.47
CLN6-208ENST00000567060 RPH3ALQ9UNE2 315 aa12.14□□□□□ -0.47
CLN6-208ENST00000567060 FRAS1Q86XX4 4008 aa12.13□□□□□ -0.47
CLN6-208ENST00000567060 TRBV6-1A0A0K0K1D8 114 aa12.13□□□□□ -0.47
CLN6-208ENST00000567060 A0A1B0GV50 99 aa12.13□□□□□ -0.47
CLN6-208ENST00000567060 BCL2P10415 239 aa12.13□□□□□ -0.47
CLN6-208ENST00000567060 GNG5P63218 68 aa12.13□□□□□ -0.47
CLN6-208ENST00000567060 CCL20P78556 96 aa12.13□□□□□ -0.47
CLN6-208ENST00000567060 SAPCD1Q5SSQ6 148 aa12.13□□□□□ -0.47
CLN6-208ENST00000567060 FMC1Q96HJ9 113 aa12.13□□□□□ -0.47
CLN6-208ENST00000567060 EDA2RQ9HAV5 297 aa12.13□□□□□ -0.47
CLN6-208ENST00000567060 VAX2Q9UIW0 290 aa12.13□□□□□ -0.47
CLN6-208ENST00000567060 KLF12Q9Y4X4 402 aa12.13□□□□□ -0.47
CLN6-208ENST00000567060 H7BYZ3 331 aa12.12□□□□□ -0.47
CLN6-208ENST00000567060 PDE6DO43924 150 aa12.12□□□□□ -0.47
CLN6-208ENST00000567060 GPX1P07203 203 aa12.12□□□□□ -0.47
CLN6-208ENST00000567060 ATP5G3P48201 142 aa12.12□□□□□ -0.47
CLN6-208ENST00000567060 FXYD7P58549 80 aa12.12□□□□□ -0.47
CLN6-208ENST00000567060 FLI1Q01543 452 aaPredicted RBP12.12□□□□□ -0.47
CLN6-208ENST00000567060 MEF2BQ02080 365 aaPredicted RBP12.12□□□□□ -0.47
CLN6-208ENST00000567060 ZFAND2AQ8N6M9 145 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms