RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 C15orf32Q32M92 178 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 AMTNQ6UX39 209 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 EEF1AKMT3Q96AZ1 226 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 KIR2DL4Q99706 377 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 Q9UFV3 132 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 LINC00527Q9UJ94 153 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 TSSC4Q9Y5U2 329 aaPredicted RBP8.36□□□□□ -1.07
USB1-212ENST00000566082 NDUFS7O75251 213 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 ASIPP42127 132 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 TEX36Q5VZQ5 186 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 TRANK1O15050 2925 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 K7EMI3 77 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 ATP5G2Q06055 141 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 C5orf64Q2M2E5 130 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 RNF182Q8N6D2 247 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 C1orf159Q96HA4 380 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 PRR25Q96S07 402 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 CSTL1Q9H114 145 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 SMPXQ9UHP9 88 aa8.36□□□□□ -1.07
USB1-212ENST00000566082 Q8N976 141 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 NUP37Q8NFH4 326 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 MBD6Q96DN6 1003 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 FAM215AQ9Y5M1 114 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 A0A1B0GXF2 115 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 ZNF672Q499Z4 452 aaPredicted RBP8.35□□□□□ -1.07
USB1-212ENST00000566082 DGAT2L7PQ6IED9 249 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 TMEM14CQ9P0S9 112 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 DKK4Q9UBT3 224 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 ASPMQ8IZT6 3477 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 H3BMG7 143 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 HLA-DMBP28068 263 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 EMP1P54849 157 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 LY6EQ16553 131 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 SLC50A1Q9BRV3 221 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 CTSZQ9UBR2 303 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 ZNF256Q9Y2P7 627 aaPredicted RBP8.35□□□□□ -1.07
USB1-212ENST00000566082 DSCAML1Q8TD84 2053 aa8.35□□□□□ -1.07
USB1-212ENST00000566082 IGKV1D-37A0A075B6S9 117 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 TRGV3P03979 118 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 NDPQ00604 133 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 ZNF56Q15929 161 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 FAM159AQ6UWV7 190 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 ZNF491Q8N8L2 437 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 VGLL1Q99990 258 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 KLF12Q9Y4X4 402 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 NCKAP5O14513 1909 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 TRAV26-2A0A0B4J265 109 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 IGHV3-11P01762 117 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 CGB3P0DN86 165 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 CGB7P0DN87 165 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 RNASE4P34096 147 aaKnown RBP8.34□□□□□ -1.07
USB1-212ENST00000566082 PDE6HQ13956 83 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 CR1LQ2VPA4 569 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 FAM106AQ4KMX7 169 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 PGPEP1Q9NXJ5 209 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 MRPL35Q9NZE8 188 aaKnown RBP8.34□□□□□ -1.07
USB1-212ENST00000566082 IGKV1-17P01599 117 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 LOXL1Q08397 574 aaPredicted RBP8.34□□□□□ -1.07
USB1-212ENST00000566082 MSRB1Q9NZV6 116 aa8.34□□□□□ -1.07
USB1-212ENST00000566082 TEX48A0A1B0GUV7 120 aa8.33□□□□□ -1.08
USB1-212ENST00000566082 E7EQL1 145 aa8.33□□□□□ -1.08
USB1-212ENST00000566082 NPIPB6E9PJ23 425 aa8.33□□□□□ -1.08
USB1-212ENST00000566082 H3BRN7 92 aa8.33□□□□□ -1.08
USB1-212ENST00000566082 TECTAO75443 2155 aa8.33□□□□□ -1.08
USB1-212ENST00000566082 EGR2P11161 476 aaPredicted RBP8.33□□□□□ -1.08
USB1-212ENST00000566082 GATA1P15976 413 aaPredicted RBP8.33□□□□□ -1.08
USB1-212ENST00000566082 WT1P19544 449 aaPredicted RBP8.33□□□□□ -1.08
USB1-212ENST00000566082 LINC00311Q8N616 119 aa8.33□□□□□ -1.08
USB1-212ENST00000566082 WFDC12Q8WWY7 111 aa8.33□□□□□ -1.08
USB1-212ENST00000566082 ORMDL2Q53FV1 153 aa8.33□□□□□ -1.08
USB1-212ENST00000566082 SPRY4Q9C004 299 aa8.33□□□□□ -1.08
USB1-212ENST00000566082 C19orf71A6NCJ1 209 aa8.33□□□□□ -1.08
USB1-212ENST00000566082 EFNA4P52798 201 aa8.33□□□□□ -1.08
USB1-212ENST00000566082 SPATA12Q7Z6I5 190 aa8.33□□□□□ -1.08
USB1-212ENST00000566082 C14orf178Q8N769 122 aaPredicted RBP8.33□□□□□ -1.08
USB1-212ENST00000566082 TNRC6AQ8NDV7 1962 aaKnown RBP8.33□□□□□ -1.08
USB1-212ENST00000566082 EXPH5Q8NEV8 1989 aa8.32□□□□□ -1.08
USB1-212ENST00000566082 NDUFS8O00217 210 aa8.32□□□□□ -1.08
USB1-212ENST00000566082 CKS1BP61024 79 aa8.32□□□□□ -1.08
USB1-212ENST00000566082 SIGLEC15Q6ZMC9 328 aa8.32□□□□□ -1.08
USB1-212ENST00000566082 IL17RELQ6ZVW7 336 aa8.32□□□□□ -1.08
USB1-212ENST00000566082 AZU1P20160 251 aa8.32□□□□□ -1.08
USB1-212ENST00000566082 PLNP26678 52 aa8.32□□□□□ -1.08
USB1-212ENST00000566082 TTC32Q5I0X7 151 aa8.32□□□□□ -1.08
USB1-212ENST00000566082 ZNF562Q6V9R5 426 aa8.32□□□□□ -1.08
USB1-212ENST00000566082 Q6ZS92 163 aa8.32□□□□□ -1.08
USB1-212ENST00000566082 RNF5Q99942 180 aa8.32□□□□□ -1.08
USB1-212ENST00000566082 CEP192Q8TEP8 1941 aa8.32□□□□□ -1.08
USB1-212ENST00000566082 IGHV3-64A0A075B6Q5 118 aa8.31□□□□□ -1.08
USB1-212ENST00000566082 TRAV8-2A0A0B4J237 113 aa8.31□□□□□ -1.08
USB1-212ENST00000566082 H7C1H1 209 aa8.31□□□□□ -1.08
USB1-212ENST00000566082 K7EM74 188 aa8.31□□□□□ -1.08
USB1-212ENST00000566082 VWC2LB2RUY7 222 aa8.31□□□□□ -1.08
USB1-212ENST00000566082 PRSS33Q8NF86 280 aa8.31□□□□□ -1.08
USB1-212ENST00000566082 PRSS22Q9GZN4 317 aa8.31□□□□□ -1.08
USB1-212ENST00000566082 SRD5A1P18405 259 aa8.31□□□□□ -1.08
USB1-212ENST00000566082 FXYD2P54710 66 aa8.31□□□□□ -1.08
USB1-212ENST00000566082 MLST8Q9BVC4 326 aa8.31□□□□□ -1.08
USB1-212ENST00000566082 ID1P41134 155 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms