RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 DAZ2Q13117 558 aaKnown RBP11.84□□□□□ -0.51
USB1-211ENST00000565662 FFAR4Q5NUL3 377 aa11.84□□□□□ -0.51
USB1-211ENST00000565662 PQLC2Q6ZP29 291 aa11.84□□□□□ -0.51
USB1-211ENST00000565662 ZNF503Q96F45 646 aa11.84□□□□□ -0.51
USB1-211ENST00000565662 FAM167A-AS1Q96KT0 104 aa11.84□□□□□ -0.51
USB1-211ENST00000565662 ATG101Q9BSB4 218 aa11.84□□□□□ -0.51
USB1-211ENST00000565662 F5H768 121 aa11.83□□□□□ -0.52
USB1-211ENST00000565662 M6PRP20645 277 aa11.83□□□□□ -0.52
USB1-211ENST00000565662 ICAM4Q14773 271 aa11.83□□□□□ -0.52
USB1-211ENST00000565662 ANXA2RQ3ZCQ2 193 aa11.83□□□□□ -0.52
USB1-211ENST00000565662 GCSAMLQ5JQS6 135 aa11.83□□□□□ -0.52
USB1-211ENST00000565662 MIR17HGQ75NE6 70 aa11.83□□□□□ -0.52
USB1-211ENST00000565662 A0A1W2PPV4 95 aa11.82□□□□□ -0.52
USB1-211ENST00000565662 H3BNG1 76 aa11.82□□□□□ -0.52
USB1-211ENST00000565662 M0R3E3 92 aa11.82□□□□□ -0.52
USB1-211ENST00000565662 GPX1P07203 203 aa11.82□□□□□ -0.52
USB1-211ENST00000565662 AZU1P20160 251 aa11.82□□□□□ -0.52
USB1-211ENST00000565662 IBA57Q5T440 356 aaKnown RBP11.82□□□□□ -0.52
USB1-211ENST00000565662 EIF4E3Q8N5X7 224 aaKnown RBP11.82□□□□□ -0.52
USB1-211ENST00000565662 LINC00612Q8N6U2 182 aa11.82□□□□□ -0.52
USB1-211ENST00000565662 TMED6Q8WW62 240 aa11.82□□□□□ -0.52
USB1-211ENST00000565662 FXYD5Q96DB9 178 aa11.82□□□□□ -0.52
USB1-211ENST00000565662 FAM19A4Q96LR4 140 aa11.82□□□□□ -0.52
USB1-211ENST00000565662 C18orf15Q96N68 181 aa11.82□□□□□ -0.52
USB1-211ENST00000565662 MED28Q9H204 178 aa11.82□□□□□ -0.52
USB1-211ENST00000565662 NOP10Q9NPE3 64 aaKnown RBP11.82□□□□□ -0.52
USB1-211ENST00000565662 TRAV12-3A0A0B4J271 114 aa11.81□□□□□ -0.52
USB1-211ENST00000565662 MBP02144 154 aa11.81□□□□□ -0.52
USB1-211ENST00000565662 CCL18P55774 89 aa11.81□□□□□ -0.52
USB1-211ENST00000565662 EXOC3-AS1Q8N2X6 119 aa11.81□□□□□ -0.52
USB1-211ENST00000565662 ZNF492Q9P255 531 aa11.81□□□□□ -0.52
USB1-211ENST00000565662 ALG5Q9Y673 324 aa11.81□□□□□ -0.52
USB1-211ENST00000565662 ZNF138P52744 262 aa11.8□□□□□ -0.52
USB1-211ENST00000565662 FAM122CQ6P4D5 195 aa11.8□□□□□ -0.52
USB1-211ENST00000565662 CMTM2Q8TAZ6 248 aa11.8□□□□□ -0.52
USB1-211ENST00000565662 ARPC5LQ9BPX5 153 aa11.8□□□□□ -0.52
USB1-211ENST00000565662 AGPAT4-IT1Q9H0P7 198 aa11.8□□□□□ -0.52
USB1-211ENST00000565662 EPPK1P58107 5090 aaKnown RBP11.8□□□□□ -0.52
USB1-211ENST00000565662 SERTM2A0A1B0GWG4 89 aa11.79□□□□□ -0.52
USB1-211ENST00000565662 RGS13O14921 159 aa11.79□□□□□ -0.52
USB1-211ENST00000565662 GIPP09681 153 aaPredicted RBP11.79□□□□□ -0.52
USB1-211ENST00000565662 OR10J4P0C629 311 aa11.79□□□□□ -0.52
USB1-211ENST00000565662 OR2G3Q8NGZ4 309 aa11.79□□□□□ -0.52
USB1-211ENST00000565662 AQP10Q96PS8 301 aa11.79□□□□□ -0.52
USB1-211ENST00000565662 PSMG3Q9BT73 122 aaPredicted RBP11.79□□□□□ -0.52
USB1-211ENST00000565662 Q9H3A6 140 aa11.79□□□□□ -0.52
USB1-211ENST00000565662 OTORQ9NRC9 128 aa11.79□□□□□ -0.52
USB1-211ENST00000565662 J3KRW8 73 aa11.78□□□□□ -0.52
USB1-211ENST00000565662 SERF2P84101 59 aa11.78□□□□□ -0.52
USB1-211ENST00000565662 INO80EQ8NBZ0 244 aaPredicted RBP11.78□□□□□ -0.52
USB1-211ENST00000565662 PHYHIPLQ96FC7 376 aa11.78□□□□□ -0.52
USB1-211ENST00000565662 SMIM3Q9BZL3 60 aa11.78□□□□□ -0.52
USB1-211ENST00000565662 BIRC6Q9NR09 4857 aa11.78□□□□□ -0.52
USB1-211ENST00000565662 DNAH6Q9C0G6 4158 aa11.77□□□□□ -0.52
USB1-211ENST00000565662 ZNF324O75467 553 aaPredicted RBP11.77□□□□□ -0.53
USB1-211ENST00000565662 TCL1AP56279 114 aa11.77□□□□□ -0.53
USB1-211ENST00000565662 RANP62826 216 aaKnown RBP11.77□□□□□ -0.53
USB1-211ENST00000565662 SLAQ13239 276 aa11.77□□□□□ -0.53
USB1-211ENST00000565662 GNPNAT1Q96EK6 184 aaPredicted RBP11.77□□□□□ -0.53
USB1-211ENST00000565662 PLA2G2EQ9NZK7 142 aa11.77□□□□□ -0.53
USB1-211ENST00000565662 TRGV2A0A075B6R0 118 aa11.76□□□□□ -0.53
USB1-211ENST00000565662 IGHV1OR15-1A0A075B7D0 117 aa11.76□□□□□ -0.53
USB1-211ENST00000565662 IGKV2-40A0A087WW87 121 aaPredicted RBP11.76□□□□□ -0.53
USB1-211ENST00000565662 NUDT3O95989 172 aa11.76□□□□□ -0.53
USB1-211ENST00000565662 IGKV2D-40P01614 121 aaPredicted RBP11.76□□□□□ -0.53
USB1-211ENST00000565662 RNASE4P34096 147 aaKnown RBP11.76□□□□□ -0.53
USB1-211ENST00000565662 ZNF415Q09FC8 603 aa11.76□□□□□ -0.53
USB1-211ENST00000565662 ERCC8Q13216 396 aa11.76□□□□□ -0.53
USB1-211ENST00000565662 KIR3DS1Q14943 382 aa11.76□□□□□ -0.53
USB1-211ENST00000565662 FBLL1A6NHQ2 334 aaKnown RBP11.75□□□□□ -0.53
USB1-211ENST00000565662 K7EQM0 130 aa11.75□□□□□ -0.53
USB1-211ENST00000565662 PRM2P04554 102 aa11.75□□□□□ -0.53
USB1-211ENST00000565662 CDC34P49427 236 aaPredicted RBP11.75□□□□□ -0.53
USB1-211ENST00000565662 BTN1A1Q13410 526 aa11.75□□□□□ -0.53
USB1-211ENST00000565662 TTC32Q5I0X7 151 aa11.75□□□□□ -0.53
USB1-211ENST00000565662 ZFAND2AQ8N6M9 145 aa11.75□□□□□ -0.53
USB1-211ENST00000565662 OR10G4Q8NGN3 311 aa11.75□□□□□ -0.53
USB1-211ENST00000565662 OR10G9Q8NGN4 311 aa11.75□□□□□ -0.53
USB1-211ENST00000565662 OR10G7Q8NGN6 311 aa11.75□□□□□ -0.53
USB1-211ENST00000565662 VPS13DQ5THJ4 4388 aa11.75□□□□□ -0.53
USB1-211ENST00000565662 TRGV11A0A075B6L2 103 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 BORCS7-ASMTA0A0B4J1R7 106 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 GAGE12BA1L429 117 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 DIRC3C9JPN6 131 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 GAGE7O76087 117 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 GAGE12FP0CL80 117 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 GAGE12GP0CL81 117 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 GAGE12IP0CL82 117 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 BTF3P20290 206 aaKnown RBP11.74□□□□□ -0.53
USB1-211ENST00000565662 OR5I1Q13606 314 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 FCN2Q15485 313 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 Q6ZR54 194 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 VGLL1Q99990 258 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 NDFIP1Q9BT67 221 aa11.74□□□□□ -0.53
USB1-211ENST00000565662 RGS21Q2M5E4 152 aa11.73□□□□□ -0.53
USB1-211ENST00000565662 Q6AWC8 147 aa11.73□□□□□ -0.53
USB1-211ENST00000565662 C11orf72Q8NBR9 251 aa11.73□□□□□ -0.53
USB1-211ENST00000565662 TMEM167BQ9NRX6 74 aa11.73□□□□□ -0.53
USB1-211ENST00000565662 TRAV26-1A0A087WT03 109 aa11.72□□□□□ -0.53
USB1-211ENST00000565662 TRGV1A0A0A0MS02 117 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms