RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 GPX7Q96SL4 187 aaPredicted RBP-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 SIGMAR1Q99720 223 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 LINC00467Q9BRT7 94 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 CACYBPQ9HB71 228 aaKnown RBP-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 PARVBQ9HBI1 364 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 POPDC3Q9HBV1 291 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 COMMD3Q9UBI1 195 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 NAT8BQ9UHF3 227 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 DSPPQ9NZW4 1301 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 KDM6AO15550 1401 aaPredicted RBP-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 FMN1Q68DA7 1419 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 CHD8Q9HCK8 2581 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 SSC5DA1L4H1 1573 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 NBPF19A0A087WUL8 3843 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 CASZ1Q86V15 1759 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 LAMA5O15230 3695 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 LOC107984156A0A0G2JMH3 177 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 A0A0G2JMM0 328 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 A0A1W2PPB8 328 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 KIR3DP1A8MWS1 328 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 M0R036 132 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 CETN3O15182 167 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 RER1O15258 196 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 HMGB3O15347 200 aaKnown RBP-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 CST7O76096 145 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 IGHV3-30P01768 117 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 IGKCP01834 107 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 TRGC2P03986 189 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 CST2P09228 141 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 IGHV3-30-5P0DP03 117 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 GNG5P63218 68 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 TPM4P67936 248 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 HIST1H3AP68431 136 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 H3F3AP84243 136 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 KLRD1Q13241 179 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 DIAPH2-AS1Q14236 149 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 EDDM3AQ14507 147 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 TAF1AQ15573 450 aaPredicted RBP-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 NEDD8Q15843 81 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 CCDC122Q5T0U0 273 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 DEFB132Q7Z7B7 95 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 ARL17AQ8IVW1 177 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 C10orf111Q8N326 155 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 LRRC18Q8N456 261 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 C5orf17Q8NAS9 161 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 CCL4L1Q8NHW4 92 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 ZNF431Q8TF32 576 aaPredicted RBP-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 ARL5BQ96KC2 179 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 TEX37Q96LM6 180 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 PAIP2Q9BPZ3 127 aaKnown RBP-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 CMSS1Q9BQ75 279 aaKnown RBP-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 TRIM4Q9C037 500 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 OTORQ9NRC9 128 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 FKBP11Q9NYL4 201 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 NKIRAS1Q9NYS0 192 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 SS18L2Q9UHA2 77 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 BOKQ9UMX3 212 aaPredicted RBP-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 PLB1Q6P1J6 1458 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 NISCHQ9Y2I1 1504 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 STARD9Q9P2P6 4700 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 LRP5O75197 1615 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 XIRP1Q702N8 1843 aaKnown RBP-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 MYH13Q9UKX3 1938 aa-0.25□□□□□ -2.45
FOXN3-216ENST00000557496 CNOT1A5YKK6 2376 aaKnown RBP-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 PLXNB2O15031 1838 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 PHIPQ8WWQ0 1821 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 KIDINS220Q9ULH0 1771 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 CAMSAP1Q5T5Y3 1602 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 CD109Q6YHK3 1445 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 FGD6Q6ZV73 1430 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 TMEM114B3SHH9 223 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 H7BYZ3 331 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 FXYD1O00168 92 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 CDC42EP2O14613 210 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 MFSD11O43934 449 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 NIPSNAP2O75323 286 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 BANF1O75531 89 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 SULT1C4O75897 302 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 RPP14O95059 124 aaKnown RBP-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 CSN2P05814 226 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 CTXN2P0C2S0 81 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 MPC1LP0DKB6 136 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 SPRR2DP22532 72 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 EVI2AP22794 236 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 RPS3P23396 243 aaKnown RBP eCLIP-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 CDKN2CP42773 168 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 OMPP47874 163 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 FXYD6P3P58550 94 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 MAGOHP61326 146 aaKnown RBP-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 NCALDP61601 193 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 HSPE1P61604 102 aaKnown RBP-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 SNCBQ16143 134 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 LTC4SQ16873 150 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 SPINK13Q1W4C9 94 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 VMA21Q3ZAQ7 101 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 BCL2L15Q5TBC7 163 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 LYRM7Q5U5X0 104 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 PHF5AQ7RTV0 110 aaKnown RBP-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 FAM216BQ8N7L0 139 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms