RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 SMIM7Q9BQ49 75 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 ATG101Q9BSB4 218 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 SIGLEC8Q9NYZ4 499 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 VWFP04275 2813 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 TRBV20OR9-2A0A075B6H5 130 aa7.65□□□□□ -1.18
SRP54-208ENST00000555557 IGKV2-40A0A087WW87 121 aaPredicted RBP7.65□□□□□ -1.18
SRP54-208ENST00000555557 K7EQG2 157 aa7.65□□□□□ -1.18
SRP54-208ENST00000555557 ISLRO14498 428 aa7.65□□□□□ -1.18
SRP54-208ENST00000555557 IGKV2D-40P01614 121 aaPredicted RBP7.65□□□□□ -1.18
SRP54-208ENST00000555557 ZNF688P0C7X2 276 aa7.65□□□□□ -1.18
SRP54-208ENST00000555557 ZNF705DP0CH99 300 aaPredicted RBP7.65□□□□□ -1.18
SRP54-208ENST00000555557 ZNF705BP0CI00 300 aaPredicted RBP7.65□□□□□ -1.18
SRP54-208ENST00000555557 DDTP30046 118 aa7.65□□□□□ -1.18
SRP54-208ENST00000555557 CSN1S1P47710 185 aa7.65□□□□□ -1.18
SRP54-208ENST00000555557 SHISA2Q6UWI4 295 aa7.65□□□□□ -1.18
SRP54-208ENST00000555557 AURKAIP1Q9NWT8 199 aaPredicted RBP7.65□□□□□ -1.18
SRP54-208ENST00000555557 SORL1Q92673 2214 aa7.65□□□□□ -1.19
SRP54-208ENST00000555557 NOTCH3Q9UM47 2321 aa7.65□□□□□ -1.19
SRP54-208ENST00000555557 F6UB75 175 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 PAFAH1B2P68402 229 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 ZNF738Q8NE65 137 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 NEU1Q99519 415 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 ANK2Q01484 3957 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 TCAPO15273 167 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 CNN1P51911 297 aaKnown RBP7.64□□□□□ -1.19
SRP54-208ENST00000555557 NDUFA6P56556 154 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 ERCC8Q13216 396 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 PSMG4Q5JS54 123 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 NHLRC2Q8NBF2 726 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 ISOC2Q96AB3 205 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 VGLL1Q99990 258 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 CBY1Q9Y3M2 126 aa7.64□□□□□ -1.19
SRP54-208ENST00000555557 IGLV1-51P01701 117 aa7.63□□□□□ -1.19
SRP54-208ENST00000555557 IGLV2-11P01706 119 aa7.63□□□□□ -1.19
SRP54-208ENST00000555557 CD33P20138 364 aa7.63□□□□□ -1.19
SRP54-208ENST00000555557 RAB4AP20338 218 aa7.63□□□□□ -1.19
SRP54-208ENST00000555557 ID1P41134 155 aa7.63□□□□□ -1.19
SRP54-208ENST00000555557 CENPWQ5EE01 88 aa7.63□□□□□ -1.19
SRP54-208ENST00000555557 NIPSNAP3BQ9BS92 247 aa7.63□□□□□ -1.19
SRP54-208ENST00000555557 UBE2G1P62253 170 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 SNRPD3P62318 126 aaKnown RBP7.62□□□□□ -1.19
SRP54-208ENST00000555557 TMEM183BQ1AE95 376 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 TMEM241Q24JQ0 296 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 PRNTQ86SH4 94 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 OR10D4PQ8NGN7 298 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 OCC1Q8TAD7 63 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 ZNF256Q9Y2P7 627 aaPredicted RBP7.62□□□□□ -1.19
SRP54-208ENST00000555557 KLF12Q9Y4X4 402 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 IFITM10A6NMD0 228 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 IGLL1P15814 213 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 RPS10P46783 165 aaKnown RBP7.62□□□□□ -1.19
SRP54-208ENST00000555557 GNG4P50150 75 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 GDF5OSQ5U4N7 250 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 BAGE2Q86Y30 109 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 ARL6IP6Q8N6S5 226 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 Q8TAT8 98 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 MRPL53Q96EL3 112 aaKnown RBP7.62□□□□□ -1.19
SRP54-208ENST00000555557 IGF2BP2-AS1Q96M15 143 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 SPAG8Q99932 426 aaPredicted RBP7.62□□□□□ -1.19
SRP54-208ENST00000555557 SDF2L1Q9HCN8 221 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 CLEC5AQ9NY25 188 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 NAT8Q9UHE5 227 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 PSG8Q9UQ74 426 aa7.62□□□□□ -1.19
SRP54-208ENST00000555557 TRAV25A0A0B4J276 109 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 CXorf65A6NEN9 183 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 K7EQM0 130 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 IGLV2-8P01709 118 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 DEFB131AP59861 70 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 RPL23P62829 140 aaKnown RBP7.61□□□□□ -1.19
SRP54-208ENST00000555557 ADIRFQ15847 76 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 SAMD13Q5VXD3 122 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 TMEM75Q8N9X5 138 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 WFDC9Q8NEX5 89 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 TVP23CQ96ET8 276 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 FMC1Q96HJ9 113 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 YPEL4Q96NS1 127 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 AGPAT4-IT1Q9H0P7 198 aa7.61□□□□□ -1.19
SRP54-208ENST00000555557 C9JCJ5 164 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 K7EN84 100 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 PPP1R2P9O14990 202 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 LTAP01374 205 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 HIST1H1AQ02539 215 aaPredicted RBP7.6□□□□□ -1.19
SRP54-208ENST00000555557 OR5I1Q13606 314 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 Q86TA4 180 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 LINC01551Q86U37 167 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 OR8A1Q8NGG7 326 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 TRAV2A0A0B4J234 112 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 OR4C46A6NHA9 309 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 MGST1P10620 155 aaKnown RBP7.6□□□□□ -1.19
SRP54-208ENST00000555557 NUTF2P61970 127 aaKnown RBP7.6□□□□□ -1.19
SRP54-208ENST00000555557 C9orf66Q5T8R8 295 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 APRG1Q8IVJ8 170 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 C8orf49Q96NF6 230 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 GPR61Q9BZJ8 451 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 MAP6D1Q9H9H5 199 aa7.6□□□□□ -1.19
SRP54-208ENST00000555557 SERTM2A0A1B0GWG4 89 aa7.59□□□□□ -1.19
SRP54-208ENST00000555557 RBAKDNA6NC62 111 aa7.59□□□□□ -1.19
SRP54-208ENST00000555557 KNCNA6PVL3 124 aa7.59□□□□□ -1.19
SRP54-208ENST00000555557 IGKV3-20P01619 116 aa7.59□□□□□ -1.19
SRP54-208ENST00000555557 CD7P09564 240 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms