RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 DEFB125Q8N687 156 aa5.37□□□□□ -1.55
LINC-ROR-201ENST00000553704 TIMD4Q96H15 378 aa5.37□□□□□ -1.55
LINC-ROR-201ENST00000553704 RPL7P18124 248 aaKnown RBP5.37□□□□□ -1.55
LINC-ROR-201ENST00000553704 PSG9Q00887 426 aa5.37□□□□□ -1.55
LINC-ROR-201ENST00000553704 HIST1H1AQ02539 215 aaPredicted RBP5.37□□□□□ -1.55
LINC-ROR-201ENST00000553704 ECSCRQ19T08 205 aa5.37□□□□□ -1.55
LINC-ROR-201ENST00000553704 COX8CQ7Z4L0 72 aa5.37□□□□□ -1.55
LINC-ROR-201ENST00000553704 Q8N9W7 124 aa5.37□□□□□ -1.55
LINC-ROR-201ENST00000553704 AJUBAQ96IF1 538 aa5.37□□□□□ -1.55
LINC-ROR-201ENST00000553704 MS4A6AQ9H2W1 248 aa5.37□□□□□ -1.55
LINC-ROR-201ENST00000553704 ZFAND3Q9H8U3 227 aa5.37□□□□□ -1.55
LINC-ROR-201ENST00000553704 RABAC1Q9UI14 185 aa5.37□□□□□ -1.55
LINC-ROR-201ENST00000553704 IGHV3OR16-13A0A075B7E8 117 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 IGHV3-74A0A0B4J1X5 117 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 PPIFP30405 207 aaKnown RBP5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 RBX1P62877 108 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 TWIST1Q15672 202 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 VAMP3Q15836 100 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 FER1L6-AS1Q8NA97 138 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 TMEM190Q8WZ59 177 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 RNF185Q96GF1 192 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 COL6A6A6NMZ7 2263 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 LINC01548A6NM66 108 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 ATP6V0E1O15342 81 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 EBI3Q14213 229 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 C15orf32Q32M92 178 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 PRSS57Q6UWY2 283 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 Q6ZQT7 251 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 IL17RELQ6ZVW7 336 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 SIRPDQ9H106 197 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 ABCA2Q9BZC7 2435 aa5.36□□□□□ -1.55
LINC-ROR-201ENST00000553704 IGHV3-49A0A0A0MS15 119 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 TRAV8-6A0A0B4J262 113 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 CLPSL1A2RUU4 121 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 HBDP02042 147 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 GATA1P15976 413 aaPredicted RBP5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 EVI2AP22794 236 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 CKS2P33552 79 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 NHLH1Q02575 133 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 CCDC144NLQ6NUI1 221 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 OR4C5Q8NGB2 326 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 ZNF502Q8TBZ5 544 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 CCDC140Q96MF4 163 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 C11orf21Q9P2W6 132 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 G3V318 75 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 ZNF207O43670 478 aaKnown RBP5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 ORM1P02763 201 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 UQCRFS1P47985 274 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 SAPCD1Q5SSQ6 148 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 AMMECR1LQ6DCA0 310 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 C12orf54Q6X4T0 127 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 C18orf15Q96N68 181 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 THYN1Q9P016 225 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 DKK2Q9UBU2 259 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 RAXQ9Y2V3 346 aa5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 SPTBN1Q01082 2364 aaKnown RBP5.35□□□□□ -1.55
LINC-ROR-201ENST00000553704 K7EP13 123 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 LGALS9BQ3B8N2 356 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 LGALS9CQ6DKI2 356 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 SELENOKQ9Y6D0 94 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 AKAP6Q13023 2319 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 HIVEP3Q5T1R4 2406 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 TRAV8-2A0A0B4J237 113 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 BUB3O43684 328 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 TRGV3P03979 118 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 CLEC3BP05452 202 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 SAA4P35542 130 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 MINOS1Q5TGZ0 78 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 S100A7AQ86SG5 101 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 PCP2Q8IVA1 136 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 FAM110DQ8TAY7 271 aaPredicted RBP5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 IFI27L1Q96BM0 104 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 JMJD8Q96S16 334 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 MINOS1-NBL1R4GNA1 71 aa5.34□□□□□ -1.55
LINC-ROR-201ENST00000553704 ITPR1Q14643 2758 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 IGKV3D-20A0A0C4DH25 116 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 CD5LO43866 347 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 CLEC19AQ6UXS0 136 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 DTX2Q86UW9 622 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 NAA38Q9BRA0 125 aaKnown RBP5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 CNFNQ9BYD5 112 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 CBY1Q9Y3M2 126 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 C7orf71A4D174 169 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 OOSP1A8MZH6 123 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 BMI1P35226 326 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 RPS20P60866 119 aaKnown RBP5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 LINC01559Q495D7 138 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 TMEM97Q5BJF2 176 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 BOD1L2Q8IYS8 172 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 TTTY13Q9BZ97 58 aa5.33□□□□□ -1.56
LINC-ROR-201ENST00000553704 IGKV2D-26A0A0A0MRZ7 120 aa5.32□□□□□ -1.56
LINC-ROR-201ENST00000553704 PCP4P48539 62 aa5.32□□□□□ -1.56
LINC-ROR-201ENST00000553704 AGPAT4-IT1Q9H0P7 198 aa5.32□□□□□ -1.56
LINC-ROR-201ENST00000553704 TRAV26-2A0A0B4J265 109 aa5.32□□□□□ -1.56
LINC-ROR-201ENST00000553704 FABP5P3A8MUU1 101 aa5.32□□□□□ -1.56
LINC-ROR-201ENST00000553704 TNFRSF6BO95407 300 aa5.32□□□□□ -1.56
LINC-ROR-201ENST00000553704 NMUP48645 174 aa5.32□□□□□ -1.56
LINC-ROR-201ENST00000553704 PRR9Q5T870 116 aa5.32□□□□□ -1.56
LINC-ROR-201ENST00000553704 ADAMTSL5Q6ZMM2 481 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms