RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 C1orf194Q5T5A4 169 aa6.36□□□□□ -1.39
RAB5B-210ENST00000553116 TMEM75Q8N9X5 138 aa6.36□□□□□ -1.39
RAB5B-210ENST00000553116 NUDT10Q8NFP7 164 aa6.36□□□□□ -1.39
RAB5B-210ENST00000553116 TMEM190Q8WZ59 177 aa6.36□□□□□ -1.39
RAB5B-210ENST00000553116 NUDT11Q96G61 164 aa6.36□□□□□ -1.39
RAB5B-210ENST00000553116 PYGO2Q9BRQ0 406 aa6.36□□□□□ -1.39
RAB5B-210ENST00000553116 ZNF702PQ9H963 129 aa6.36□□□□□ -1.39
RAB5B-210ENST00000553116 TRAPPC1Q9Y5R8 145 aa6.36□□□□□ -1.39
RAB5B-210ENST00000553116 SMAD5-AS1Q9Y6J3 95 aa6.36□□□□□ -1.39
RAB5B-210ENST00000553116 A0A1W2PS18 150 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 CHEK1O14757 476 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 FAM106AQ4KMX7 169 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 RNF182Q8N6D2 247 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 SMIM12Q96EX1 92 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 SLC50A1Q9BRV3 221 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 ZNF331Q9NQX6 463 aaPredicted RBP6.35□□□□□ -1.39
RAB5B-210ENST00000553116 ZNF580Q9UK33 172 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 RIPPLY3P57055 190 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 MRPL54Q6P161 138 aaKnown RBP6.35□□□□□ -1.39
RAB5B-210ENST00000553116 TMEM183AQ8IXX5 376 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 C16orf92Q96LL3 132 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 SETD2Q9BYW2 2564 aaPredicted RBP6.35□□□□□ -1.39
RAB5B-210ENST00000553116 CD5LO43866 347 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 RAB4AP20338 218 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 JOSD1Q15040 202 aaPredicted RBP6.35□□□□□ -1.39
RAB5B-210ENST00000553116 WDR73Q6P4I2 378 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 FAM231DQ6ZW35 169 aa6.35□□□□□ -1.39
RAB5B-210ENST00000553116 HIVEP2P31629 2446 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 SERTM2A0A1B0GWG4 89 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 FAM181BA6NEQ2 426 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 ZNF253O75346 499 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 CBLN1P23435 193 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 ZFP30Q9Y2G7 519 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 DNAJC9-AS1A6NH13 148 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 SNURFLB1AK76 121 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 CCL25O15444 150 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 TYMSP04818 313 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 LCN12Q6JVE5 192 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 C8orf86Q6ZUL3 223 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 Q8TAT8 98 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 RPP21Q9H633 154 aaKnown RBP6.34□□□□□ -1.39
RAB5B-210ENST00000553116 DAZ1Q9NQZ3 744 aaKnown RBP6.34□□□□□ -1.39
RAB5B-210ENST00000553116 TP73-AS1Q9UF72 201 aa6.34□□□□□ -1.39
RAB5B-210ENST00000553116 TRAV9-1A0A075B6T8 112 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 A0A087X0K7 114 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 IGLV2-11P01706 119 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 ELANEP08246 267 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 FOXE3Q13461 319 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 NDFIP1Q9BT67 221 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 MLST8Q9BVC4 326 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 C20orf202A1L168 122 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 TMEM89A2RUT3 159 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 SCGB2A2Q13296 93 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 ACTL10Q5JWF8 245 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 LINC00322Q6ZN03 302 aaPredicted RBP6.33□□□□□ -1.4
RAB5B-210ENST00000553116 ATOH7Q8N100 152 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 OR2D3Q8NGH3 330 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 C8orf49Q96NF6 230 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 RHPN1-AS1Q9BWJ2 59 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 NAT8BQ9UHF3 227 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 GRIFINA4D1Z8 144 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 HIGD1CA8MV81 97 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 A8MWL6 223 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 Q71RC1 249 aaPredicted RBP6.33□□□□□ -1.4
RAB5B-210ENST00000553116 TMEM256Q8N2U0 113 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 KLHDC1Q8N7A1 406 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 ZNF492Q9P255 531 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 U3KQE9 123 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 NF1P21359 2839 aa6.33□□□□□ -1.4
RAB5B-210ENST00000553116 SMIM27A0A1W2PRY6 76 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 LGALS1P09382 135 aaKnown RBP6.32□□□□□ -1.4
RAB5B-210ENST00000553116 LBHQ53QV2 105 aaPredicted RBP6.32□□□□□ -1.4
RAB5B-210ENST00000553116 TCF24Q7RTU0 167 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 TMEM86BQ8N661 226 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 ZNF738Q8NE65 137 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 TSKUQ8WUA8 353 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 GLMPQ8WWB7 406 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 VGLL1Q99990 258 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 TPPP3Q9BW30 176 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 IGHV7-4-1A0A0J9YVY3 117 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 IZUMO1RA6ND01 250 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 NUPR1O60356 82 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 HINT1P49773 126 aaPredicted RBP6.32□□□□□ -1.4
RAB5B-210ENST00000553116 ERCC8Q13216 396 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 MRPL18Q9H0U6 180 aaKnown RBP6.32□□□□□ -1.4
RAB5B-210ENST00000553116 UFC1Q9Y3C8 167 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 TRBV6-1A0A0K0K1D8 114 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 SRD5A1P18405 259 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 BMI1P35226 326 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 CAMPP49913 170 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 SYNJ2BPP57105 145 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 KRTAP1-1Q07627 177 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 TMEM78Q5T7P6 136 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 NUP35Q8NFH5 326 aa6.32□□□□□ -1.4
RAB5B-210ENST00000553116 TMSB15BA0A087X1C1 80 aa6.31□□□□□ -1.4
RAB5B-210ENST00000553116 FBLL1A6NHQ2 334 aaKnown RBP6.31□□□□□ -1.4
RAB5B-210ENST00000553116 PRAC2D3DTV9 90 aa6.31□□□□□ -1.4
RAB5B-210ENST00000553116 PRR31Q5SQ13 230 aa6.31□□□□□ -1.4
RAB5B-210ENST00000553116 PGLYRP4Q96LB8 373 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms