RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 TMEM241Q24JQ0 296 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 C5orf17Q8NAS9 161 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 MUC7Q8TAX7 377 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 DLX4Q92988 240 aaPredicted RBP4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 Q9H3A6 140 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 AAMDCQ9H7C9 122 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 PEMTQ9UBM1 199 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 ZNF256Q9Y2P7 627 aaPredicted RBP4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 KLF12Q9Y4X4 402 aa4.63□□□□□ -1.67
DEPDC4-209ENST00000550587 ZNF727A8MUV8 499 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 SLC17A3O00476 420 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 SNAPINO95295 136 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 SLC25A5P05141 298 aaKnown RBP4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 CEBPGP53567 150 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 SAMD13Q5VXD3 122 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 TCF24Q7RTU0 167 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 EXOC3-AS1Q8N2X6 119 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 SVBPQ8N300 66 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 OR9G4Q8NGQ1 327 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 C2CD4CQ8TF44 421 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 DUX3Q96PT4 197 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 PRR25Q96S07 402 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 ASCL2Q99929 193 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 SMIM7Q9BQ49 75 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 SLC50A1Q9BRV3 221 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 NIPSNAP3BQ9BS92 247 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 PARLQ9H300 379 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 SDF2L1Q9HCN8 221 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 NRN1Q9NPD7 142 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 ZNF331Q9NQX6 463 aaPredicted RBP4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 SIGLEC8Q9NYZ4 499 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 MLXQ9UH92 298 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 PRELID1Q9Y255 219 aa4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 EPPK1P58107 5090 aaKnown RBP4.62□□□□□ -1.67
DEPDC4-209ENST00000550587 SORL1Q92673 2214 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 TRAV8-2A0A0B4J237 113 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 SERTM2A0A1B0GWG4 89 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 B4DEV8 164 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 C9JCJ5 164 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 K7EQM0 130 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 PEX7O00628 323 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 ISLRO14498 428 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 OVOL1O14753 267 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 TCRAP04437 139 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 CSN3P07498 182 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 RPL35P42766 123 aaKnown RBP4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 CSN1S1P47710 185 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 CNN1P51911 297 aaKnown RBP4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 TAS2R60P59551 318 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 PNRC1Q12796 327 aaPredicted RBP4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 GUCA2BQ16661 112 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 TMEM183BQ1AE95 376 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 CASC10Q5T4H9 136 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 LCN12Q6JVE5 192 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 ADAMTSL5Q6ZMM2 481 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 CMTM2Q8TAZ6 248 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 MRPL53Q96EL3 112 aaKnown RBP4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 TVP23CQ96ET8 276 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 ATG101Q9BSB4 218 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 DERL1Q9BUN8 251 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 NAT8Q9UHE5 227 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 LY96Q9Y6Y9 160 aa4.61□□□□□ -1.67
DEPDC4-209ENST00000550587 TRBV20OR9-2A0A075B6H5 130 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 TRBV6-1A0A0K0K1D8 114 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 FBLL1A6NHQ2 334 aaKnown RBP4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 DIRC3C9JPN6 131 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 SOCS3O14543 225 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 SAP30O75446 220 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 EDN2P20800 178 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 ID1P41134 155 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 AKR1C3P42330 323 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 GNG4P50150 75 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 PAFAH1B2P68402 229 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 PSG3Q16557 428 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 ZNF674Q2M3X9 581 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 DEFB114Q30KQ6 69 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 CLRN3Q8NCR9 226 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 OCC1Q8TAD7 63 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 DCANP1Q8TF63 244 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 FMC1Q96HJ9 113 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 C16orf92Q96LL3 132 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 LINC00479Q96M42 142 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 RCHY1Q96PM5 261 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 MS4A6AQ9H2W1 248 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 TNFRSF18Q9Y5U5 241 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 TENM3Q9P273 2699 aa4.6□□□□□ -1.67
DEPDC4-209ENST00000550587 CMYA5Q8N3K9 4069 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 A0A087WWC5 75 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 TRAV2A0A0B4J234 112 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 TRAV34A0A0B4J273 112 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 TRAV25A0A0B4J276 109 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 C7orf77A4D0Y5 90 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 RBAKDNA6NC62 111 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 ZNF705FA8MVS1 300 aaPredicted RBP4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 M0R036 132 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 M0R3E3 92 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 DNASE2O00115 360 aaPredicted RBP4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 TSPAN4O14817 238 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 LTAP01374 205 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms