RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 ENKURQ8TC29 256 aa10.02□□□□□ -0.81
COL2A1-209ENST00000546974 RXFP4Q8TDU9 374 aa10.02□□□□□ -0.81
COL2A1-209ENST00000546974 GNPNAT1Q96EK6 184 aaPredicted RBP10.02□□□□□ -0.81
COL2A1-209ENST00000546974 FAM19A4Q96LR4 140 aa10.02□□□□□ -0.81
COL2A1-209ENST00000546974 AAMDCQ9H7C9 122 aa10.02□□□□□ -0.81
COL2A1-209ENST00000546974 TRAV26-1A0A087WT03 109 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 C7orf71A4D174 169 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 KLLNB2CW77 178 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 H3BNG1 76 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 SIX6O95475 246 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 HOXA5P20719 270 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 C9orf47Q6ZRZ4 202 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 SSX7Q7RTT5 188 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 EXOC3-AS1Q8N2X6 119 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 C6orf223Q8N319 242 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 BLNKQ8WV28 456 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 LINC00467Q9BRT7 94 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 SLC25A2Q9BXI2 301 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 AGPAT4-IT1Q9H0P7 198 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 DNAH5Q8TE73 4624 aa10.01□□□□□ -0.81
COL2A1-209ENST00000546974 PRAF2O60831 178 aa10□□□□□ -0.81
COL2A1-209ENST00000546974 ZNF324O75467 553 aaPredicted RBP10□□□□□ -0.81
COL2A1-209ENST00000546974 UPK1BO75841 260 aa10□□□□□ -0.81
COL2A1-209ENST00000546974 NMBP08949 121 aa10□□□□□ -0.81
COL2A1-209ENST00000546974 CRISP2P16562 243 aa10□□□□□ -0.81
COL2A1-209ENST00000546974 CYCSP99999 105 aaKnown RBP10□□□□□ -0.81
COL2A1-209ENST00000546974 ZNF680Q8NEM1 530 aa10□□□□□ -0.81
COL2A1-209ENST00000546974 THAP6Q8TBB0 222 aa10□□□□□ -0.81
COL2A1-209ENST00000546974 FAM167A-AS1Q96KT0 104 aa10□□□□□ -0.81
COL2A1-209ENST00000546974 OR5AC2Q9NZP5 309 aa10□□□□□ -0.81
COL2A1-209ENST00000546974 A0A0J9YY99 117 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 H0YIZ8 118 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 NBEAP1P0C6P0 100 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 TNP2Q05952 138 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 CD300CQ08708 224 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 ICAM4Q14773 271 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 ANXA2RQ3ZCQ2 193 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 Q6ZTI0 123 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 MIR17HGQ75NE6 70 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 EIF4E3Q8N5X7 224 aaKnown RBP9.99□□□□□ -0.81
COL2A1-209ENST00000546974 C11orf72Q8NBR9 251 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 C18orf15Q96N68 181 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 MRPL32Q9BYC8 188 aaKnown RBP9.99□□□□□ -0.81
COL2A1-209ENST00000546974 WDR61Q9GZS3 305 aaKnown RBP9.99□□□□□ -0.81
COL2A1-209ENST00000546974 OR51M1Q9H341 326 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 Q9H8V8 135 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 KCNIP2Q9NS61 270 aa9.99□□□□□ -0.81
COL2A1-209ENST00000546974 GPX1P07203 203 aa9.98□□□□□ -0.81
COL2A1-209ENST00000546974 RNASE4P34096 147 aaKnown RBP9.98□□□□□ -0.81
COL2A1-209ENST00000546974 BTN1A1Q13410 526 aa9.98□□□□□ -0.81
COL2A1-209ENST00000546974 LRRC37A5PQ49AS3 106 aa9.98□□□□□ -0.81
COL2A1-209ENST00000546974 TMEM78Q5T7P6 136 aa9.98□□□□□ -0.81
COL2A1-209ENST00000546974 ZNF575Q86XF7 245 aa9.98□□□□□ -0.81
COL2A1-209ENST00000546974 TMPRSS5Q9H3S3 457 aa9.98□□□□□ -0.81
COL2A1-209ENST00000546974 GSN-AS1Q9NRJ2 163 aa9.98□□□□□ -0.81
COL2A1-209ENST00000546974 ABCA13Q86UQ4 5058 aa9.98□□□□□ -0.81
COL2A1-209ENST00000546974 APOBP04114 4563 aaKnown RBP9.97□□□□□ -0.81
COL2A1-209ENST00000546974 C17orf112F2Z3M2 114 aa9.97□□□□□ -0.81
COL2A1-209ENST00000546974 INMT-MINDY4F8WBC2 141 aa9.97□□□□□ -0.81
COL2A1-209ENST00000546974 IFITM3Q01628 133 aa9.97□□□□□ -0.81
COL2A1-209ENST00000546974 ESRGQ1W209 222 aa9.97□□□□□ -0.81
COL2A1-209ENST00000546974 FAM122CQ6P4D5 195 aa9.97□□□□□ -0.81
COL2A1-209ENST00000546974 FXYD5Q96DB9 178 aa9.97□□□□□ -0.81
COL2A1-209ENST00000546974 VGLL1Q99990 258 aa9.97□□□□□ -0.81
COL2A1-209ENST00000546974 UPK3BQ9BT76 320 aa9.97□□□□□ -0.81
COL2A1-209ENST00000546974 PAXXQ9BUH6 204 aa9.97□□□□□ -0.81
COL2A1-209ENST00000546974 ZNF492Q9P255 531 aa9.97□□□□□ -0.81
COL2A1-209ENST00000546974 FUT9Q9Y231 359 aa9.97□□□□□ -0.81
COL2A1-209ENST00000546974 TRGV2A0A075B6R0 118 aa9.96□□□□□ -0.82
COL2A1-209ENST00000546974 IGKV2-40A0A087WW87 121 aaPredicted RBP9.96□□□□□ -0.82
COL2A1-209ENST00000546974 TRBV7-9A0A0J9YWB2 115 aa9.96□□□□□ -0.82
COL2A1-209ENST00000546974 SPINK4O60575 86 aa9.96□□□□□ -0.82
COL2A1-209ENST00000546974 IGKV2D-40P01614 121 aaPredicted RBP9.96□□□□□ -0.82
COL2A1-209ENST00000546974 TCL1AP56279 114 aa9.96□□□□□ -0.82
COL2A1-209ENST00000546974 TTC32Q5I0X7 151 aa9.96□□□□□ -0.82
COL2A1-209ENST00000546974 IBA57Q5T440 356 aaKnown RBP9.96□□□□□ -0.82
COL2A1-209ENST00000546974 ZFAND2AQ8N6M9 145 aa9.96□□□□□ -0.82
COL2A1-209ENST00000546974 MARVELD1Q9BSK0 173 aa9.96□□□□□ -0.82
COL2A1-209ENST00000546974 TRGV1A0A0A0MS02 117 aa9.95□□□□□ -0.82
COL2A1-209ENST00000546974 OR10J4P0C629 311 aa9.95□□□□□ -0.82
COL2A1-209ENST00000546974 H2BFSP57053 126 aa9.95□□□□□ -0.82
COL2A1-209ENST00000546974 PRR9Q5T870 116 aa9.95□□□□□ -0.82
COL2A1-209ENST00000546974 LYPD1Q8N2G4 141 aa9.95□□□□□ -0.82
COL2A1-209ENST00000546974 PPP1R1CQ8WVI7 109 aa9.95□□□□□ -0.82
COL2A1-209ENST00000546974 VSIG2Q96IQ7 327 aa9.95□□□□□ -0.82
COL2A1-209ENST00000546974 ATP5SQ99766 215 aa9.95□□□□□ -0.82
COL2A1-209ENST00000546974 Q9H3A6 140 aa9.95□□□□□ -0.82
COL2A1-209ENST00000546974 MRPS16Q9Y3D3 137 aaKnown RBP9.95□□□□□ -0.82
COL2A1-209ENST00000546974 KLF12Q9Y4X4 402 aa9.95□□□□□ -0.82
COL2A1-209ENST00000546974 IGHV1OR15-1A0A075B7D0 117 aa9.94□□□□□ -0.82
COL2A1-209ENST00000546974 A0A096LPF7 62 aa9.94□□□□□ -0.82
COL2A1-209ENST00000546974 A0A1W2PPQ1 181 aa9.94□□□□□ -0.82
COL2A1-209ENST00000546974 RGS13O14921 159 aa9.94□□□□□ -0.82
COL2A1-209ENST00000546974 ZNF138P52744 262 aa9.94□□□□□ -0.82
COL2A1-209ENST00000546974 PHYHIPLQ96FC7 376 aa9.94□□□□□ -0.82
COL2A1-209ENST00000546974 HSPB11Q9Y547 144 aa9.94□□□□□ -0.82
COL2A1-209ENST00000546974 RBAKDNA6NC62 111 aa9.93□□□□□ -0.82
COL2A1-209ENST00000546974 C16orf90A8MZG2 172 aa9.93□□□□□ -0.82
COL2A1-209ENST00000546974 OR7C2O60412 319 aa9.93□□□□□ -0.82
COL2A1-209ENST00000546974 MPC2O95563 127 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 242.5 ms