RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PPP1R17O96001 155 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 SMIM13P0DJ93 91 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 SCGB1A1P11684 91 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 SLC25A16P16260 332 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 CNTFRP26992 372 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 RUSC1-AS1Q66K80 236 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 CFAP161Q6P656 301 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 IL17RELQ6ZVW7 336 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 NEGR1Q7Z3B1 354 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 ERASQ7Z444 233 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 Q8N6K4 173 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 Q8N8P6 123 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 OR8A1Q8NGG7 326 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 FAM110DQ8TAY7 271 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-225ENST00000545920 MRAP2Q96G30 205 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 TM2D2Q9BX73 214 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 PRR14LQ5THK1 2151 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 PCNX2A6NKB5 2137 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 UNC80Q8N2C7 3258 aa5.03□□□□□ -1.6
SNHG1-225ENST00000545920 ZDBF2Q9HCK1 2354 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 RAI1Q7Z5J4 1906 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-225ENST00000545920 IGHV3-21A0A0B4J1V1 117 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 TRAV12-1A0A0B4J245 112 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 TRBV7-9A0A0J9YWB2 115 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 A0A1W2PPM0 123 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 A0A1W2PRX2 142 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 H3BTX0 84 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 DPM2O94777 84 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 GOSR1O95249 250 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 GCSHP23434 173 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 COX7A1P24310 79 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 PLNP26678 52 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 ZNF138P52744 262 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 AMN1Q8IY45 258 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 CSTL1Q9H114 145 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 ONECUT1Q9UBC0 465 aa5.02□□□□□ -1.61
SNHG1-225ENST00000545920 TRBV7-1A0A0A6YYK4 115 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-225ENST00000545920 TMEM213A2RRL7 107 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 G3V4G9 280 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 M0R3E3 92 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 NCR2O95944 276 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 IGKCP01834 107 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 CLEC3BP05452 202 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 FAM106CPP0CH98 169 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 EGR2P11161 476 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-225ENST00000545920 CD24P25063 80 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 ORMDL2Q53FV1 153 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 KLF17Q5JT82 389 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-225ENST00000545920 SAMD13Q5VXD3 122 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 MYOZ3Q8TDC0 251 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 RNF185Q96GF1 192 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 C17orf77Q96MU5 243 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 C8orf49Q96NF6 230 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 C20orf78Q9BR46 151 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 TPPP3Q9BW30 176 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 XIRP2A4UGR9 3374 aa5.01□□□□□ -1.61
SNHG1-225ENST00000545920 GPR179Q6PRD1 2367 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 TRIOBPQ9H2D6 2365 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 LOC389332A0A1B0GUA5 103 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 F8W1H4 67 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 H0Y8G0 127 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 M0R381 172 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 KLK10O43240 276 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 SNAI2O43623 268 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 BRI3O95415 125 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 NPYP01303 97 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 ORM1P02763 201 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 CTSGP08311 255 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 RPL32P62910 135 aaKnown RBP5□□□□□ -1.61
SNHG1-225ENST00000545920 LAGE3Q14657 143 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 TMEM78Q5T7P6 136 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 ASPHD1Q5U4P2 390 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 C9orf47Q6ZRZ4 202 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 Q6ZVH6 145 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 ZNF502Q8TBZ5 544 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 SPCS1Q9Y6A9 102 aa5□□□□□ -1.61
SNHG1-225ENST00000545920 CADP27708 2225 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 IGLV2-18A0A075B6J9 118 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 IGKV2-40A0A087WW87 121 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-225ENST00000545920 A0A087WX48 190 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 CENPVL3A0A0U1RRI6 287 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 H3BUT2 72 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 BUB3O43684 328 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 IGKV2D-40P01614 121 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-225ENST00000545920 PRSS1P07477 247 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 TMEM11P17152 192 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 LEPP41159 167 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 NMUP48645 174 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 CRIP2P52943 208 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-225ENST00000545920 LOXL1Q08397 574 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-225ENST00000545920 HES1Q14469 280 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 PAPPA-AS1Q5QFB9 102 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 LYRM7Q5U5X0 104 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 C9orf139Q6ZV77 190 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 VMO1Q7Z5L0 202 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 CEND1Q8N111 149 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 Q8NA96 180 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 EEF1AKMT3Q96AZ1 226 aa4.99□□□□□ -1.61
SNHG1-225ENST00000545920 METTL26Q96S19 204 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms