RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 IGHV1-69P01742 117 aa14.36□□□□□ -0.11
COPS7A-215ENST00000543155 ORM1P02763 201 aa14.36□□□□□ -0.11
COPS7A-215ENST00000543155 LINC01545Q5VT33 79 aa14.36□□□□□ -0.11
COPS7A-215ENST00000543155 PIMREGQ9BSJ6 248 aa14.36□□□□□ -0.11
COPS7A-215ENST00000543155 TIMM8BQ9Y5J9 83 aaPredicted RBP14.36□□□□□ -0.11
COPS7A-215ENST00000543155 SPTBN1Q01082 2364 aaKnown RBP14.36□□□□□ -0.11
COPS7A-215ENST00000543155 MUC21A0A0G2JKD1 596 aa14.35□□□□□ -0.11
COPS7A-215ENST00000543155 MUC21A0A140T8X8 626 aa14.35□□□□□ -0.11
COPS7A-215ENST00000543155 CRIP2P52943 208 aaPredicted RBP14.35□□□□□ -0.11
COPS7A-215ENST00000543155 C19orf54Q5BKX5 351 aa14.35□□□□□ -0.11
COPS7A-215ENST00000543155 MUC21Q5SSG8 566 aa14.35□□□□□ -0.11
COPS7A-215ENST00000543155 MRPL53Q96EL3 112 aaKnown RBP14.35□□□□□ -0.11
COPS7A-215ENST00000543155 IGHV3OR16-10A0A075B7F0 116 aa14.35□□□□□ -0.11
COPS7A-215ENST00000543155 FAM223BA6NKX1 122 aa14.35□□□□□ -0.11
COPS7A-215ENST00000543155 LINC01559Q495D7 138 aa14.35□□□□□ -0.11
COPS7A-215ENST00000543155 ZNF575Q86XF7 245 aa14.35□□□□□ -0.11
COPS7A-215ENST00000543155 FAM223AQ8IWN6 122 aa14.35□□□□□ -0.11
COPS7A-215ENST00000543155 PSMG3-AS1Q96PY0 264 aa14.35□□□□□ -0.11
COPS7A-215ENST00000543155 LOC389332A0A1B0GUA5 103 aa14.34□□□□□ -0.11
COPS7A-215ENST00000543155 H0Y8G0 127 aa14.34□□□□□ -0.11
COPS7A-215ENST00000543155 HINT1P49773 126 aaPredicted RBP14.34□□□□□ -0.11
COPS7A-215ENST00000543155 CNFNQ9BYD5 112 aa14.34□□□□□ -0.11
COPS7A-215ENST00000543155 U3KQE9 123 aa14.34□□□□□ -0.11
COPS7A-215ENST00000543155 SPTBN4Q9H254 2564 aa14.33□□□□□ -0.11
COPS7A-215ENST00000543155 IL17RELQ6ZVW7 336 aa14.33□□□□□ -0.11
COPS7A-215ENST00000543155 IGHV3OR16-13A0A075B7E8 117 aa14.33□□□□□ -0.12
COPS7A-215ENST00000543155 IGHV3-74A0A0B4J1X5 117 aa14.33□□□□□ -0.12
COPS7A-215ENST00000543155 TRAV8-2A0A0B4J237 113 aa14.33□□□□□ -0.12
COPS7A-215ENST00000543155 CKS2P33552 79 aa14.33□□□□□ -0.12
COPS7A-215ENST00000543155 FAM106AQ4KMX7 169 aa14.33□□□□□ -0.12
COPS7A-215ENST00000543155 PIFOQ8TCI5 191 aa14.33□□□□□ -0.12
COPS7A-215ENST00000543155 MS4A6AQ9H2W1 248 aa14.33□□□□□ -0.12
COPS7A-215ENST00000543155 A0A096LNJ9 63 aa14.32□□□□□ -0.12
COPS7A-215ENST00000543155 ZNF207O43670 478 aaKnown RBP14.32□□□□□ -0.12
COPS7A-215ENST00000543155 C8orf86Q6ZUL3 223 aa14.32□□□□□ -0.12
COPS7A-215ENST00000543155 TRAV40A0A0B4J280 105 aa14.32□□□□□ -0.12
COPS7A-215ENST00000543155 IGHV4-61A0A0C4DH41 118 aa14.32□□□□□ -0.12
COPS7A-215ENST00000543155 LOXL1Q08397 574 aaPredicted RBP14.32□□□□□ -0.12
COPS7A-215ENST00000543155 MCRIP2Q9BUT9 160 aaKnown RBP14.32□□□□□ -0.12
COPS7A-215ENST00000543155 MEGF9Q9H1U4 602 aa14.32□□□□□ -0.12
COPS7A-215ENST00000543155 HIF1ANQ9NWT6 349 aa14.32□□□□□ -0.12
COPS7A-215ENST00000543155 IGHV3-49A0A0A0MS15 119 aa14.31□□□□□ -0.12
COPS7A-215ENST00000543155 HIST1H1AQ02539 215 aaPredicted RBP14.31□□□□□ -0.12
COPS7A-215ENST00000543155 ZNF124Q15973 351 aa14.31□□□□□ -0.12
COPS7A-215ENST00000543155 TMEM78Q5T7P6 136 aa14.31□□□□□ -0.12
COPS7A-215ENST00000543155 SLC25A34Q6PIV7 304 aa14.31□□□□□ -0.12
COPS7A-215ENST00000543155 BRD3OSQ6XYD6 125 aa14.31□□□□□ -0.12
COPS7A-215ENST00000543155 CCL19Q99731 98 aa14.31□□□□□ -0.12
COPS7A-215ENST00000543155 AGPAT4-IT1Q9H0P7 198 aa14.31□□□□□ -0.12
COPS7A-215ENST00000543155 SCRT2Q9NQ03 307 aa14.31□□□□□ -0.12
COPS7A-215ENST00000543155 GOLT1BQ9Y3E0 138 aa14.31□□□□□ -0.12
COPS7A-215ENST00000543155 CSMD1Q96PZ7 3565 aa14.31□□□□□ -0.12
COPS7A-215ENST00000543155 ITPR1Q14643 2758 aa14.3□□□□□ -0.12
COPS7A-215ENST00000543155 NPYP01303 97 aa14.3□□□□□ -0.12
COPS7A-215ENST00000543155 TRGV3P03979 118 aa14.3□□□□□ -0.12
COPS7A-215ENST00000543155 C10orf105Q8TEF2 133 aa14.3□□□□□ -0.12
COPS7A-215ENST00000543155 SMKR1H3BMG3 65 aa14.3□□□□□ -0.12
COPS7A-215ENST00000543155 NDUFS8O00217 210 aa14.29□□□□□ -0.12
COPS7A-215ENST00000543155 PPBPP02775 128 aa14.29□□□□□ -0.12
COPS7A-215ENST00000543155 PMCHL2Q9BQD1 86 aa14.29□□□□□ -0.12
COPS7A-215ENST00000543155 LINC00527Q9UJ94 153 aa14.29□□□□□ -0.12
COPS7A-215ENST00000543155 ABCA2Q9BZC7 2435 aa14.29□□□□□ -0.12
COPS7A-215ENST00000543155 NCR2O95944 276 aa14.29□□□□□ -0.12
COPS7A-215ENST00000543155 HBDP02042 147 aa14.29□□□□□ -0.12
COPS7A-215ENST00000543155 ARL3P36405 182 aa14.29□□□□□ -0.12
COPS7A-215ENST00000543155 RNF185Q96GF1 192 aa14.29□□□□□ -0.12
COPS7A-215ENST00000543155 MSRB1Q9NZV6 116 aa14.29□□□□□ -0.12
COPS7A-215ENST00000543155 NPSP0C0P6 89 aa14.28□□□□□ -0.12
COPS7A-215ENST00000543155 C9orf47Q6ZRZ4 202 aa14.28□□□□□ -0.12
COPS7A-215ENST00000543155 OR8A1Q8NGG7 326 aa14.28□□□□□ -0.12
COPS7A-215ENST00000543155 TP73-AS1Q9UF72 201 aa14.28□□□□□ -0.12
COPS7A-215ENST00000543155 MED13LQ71F56 2210 aa14.28□□□□□ -0.12
COPS7A-215ENST00000543155 IGF1P05019 195 aa14.27□□□□□ -0.12
COPS7A-215ENST00000543155 GLMPQ8WWB7 406 aa14.27□□□□□ -0.12
COPS7A-215ENST00000543155 PPP1R14DQ9NXH3 145 aa14.27□□□□□ -0.12
COPS7A-215ENST00000543155 IGKV3D-20A0A0C4DH25 116 aa14.27□□□□□ -0.13
COPS7A-215ENST00000543155 TCF21O43680 179 aa14.27□□□□□ -0.13
COPS7A-215ENST00000543155 CLEC2AQ6UVW9 174 aa14.27□□□□□ -0.13
COPS7A-215ENST00000543155 C9orf139Q6ZV77 190 aa14.26□□□□□ -0.13
COPS7A-215ENST00000543155 C16orf92Q96LL3 132 aa14.26□□□□□ -0.13
COPS7A-215ENST00000543155 MAP1LC3AQ9H492 121 aa14.26□□□□□ -0.13
COPS7A-215ENST00000543155 CHD8Q9HCK8 2581 aa14.26□□□□□ -0.13
COPS7A-215ENST00000543155 H3BUA1 57 aa14.26□□□□□ -0.13
COPS7A-215ENST00000543155 IGHV4-38-2P0DP08 117 aa14.26□□□□□ -0.13
COPS7A-215ENST00000543155 LGALS9BQ3B8N2 356 aa14.26□□□□□ -0.13
COPS7A-215ENST00000543155 LGALS9CQ6DKI2 356 aa14.26□□□□□ -0.13
COPS7A-215ENST00000543155 PRSS57Q6UWY2 283 aa14.26□□□□□ -0.13
COPS7A-215ENST00000543155 ORAOV1Q8WV07 137 aa14.26□□□□□ -0.13
COPS7A-215ENST00000543155 C11orf21Q9P2W6 132 aa14.26□□□□□ -0.13
COPS7A-215ENST00000543155 NCOR2Q9Y618 2525 aa14.25□□□□□ -0.13
COPS7A-215ENST00000543155 BRI3O95415 125 aa14.25□□□□□ -0.13
COPS7A-215ENST00000543155 NPFFR1Q9GZQ6 430 aa14.25□□□□□ -0.13
COPS7A-215ENST00000543155 LINC01546A6NGU7 62 aa14.24□□□□□ -0.13
COPS7A-215ENST00000543155 NDUFA4O00483 81 aa14.24□□□□□ -0.13
COPS7A-215ENST00000543155 LY6EQ16553 131 aa14.24□□□□□ -0.13
COPS7A-215ENST00000543155 A6NDX4 124 aa14.24□□□□□ -0.13
COPS7A-215ENST00000543155 IGHG2P01859 326 aa14.24□□□□□ -0.13
COPS7A-215ENST00000543155 PPIFP30405 207 aaKnown RBP14.24□□□□□ -0.13
COPS7A-215ENST00000543155 DPF1Q92782 380 aa14.24□□□□□ -0.13
COPS7A-215ENST00000543155 USMG5Q96IX5 58 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms