RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 DYSFO75923 2080 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 LRP4O75096 1905 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 IGKV1D-37A0A075B6S9 117 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 TRAV8-1A0A0A6YYK1 113 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 IGHV3-43A0A0B4J1X8 118 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 TRGV8A0A0C4DH27 118 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 IGHV5-51A0A0C4DH38 117 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 MYMXA0A1B0GTQ4 84 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 A0A1B0GUT8 65 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 RBAKDNA6NC62 111 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 PGPA6NDG6 321 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 LINC01549A6NIU2 74 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 A8MWV9 139 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 DEFB108AA8MXU0 73 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 SMIM1B2RUZ4 78 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 D6R8Y8 96 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 F5H768 121 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 H3BTX0 84 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 DUSP14O95147 198 aaKnown RBP2.43□□□□□ -2.02
CSDE1-216ENST00000534389 NGFP01138 241 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 IGKV3-20P01619 116 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 P01737 135 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 HBDP02042 147 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 LGALS1P09382 135 aaKnown RBP2.43□□□□□ -2.02
CSDE1-216ENST00000534389 IGHV3-43DP0DP04 118 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 RNASE2P10153 161 aaKnown RBP2.43□□□□□ -2.02
CSDE1-216ENST00000534389 GATA1P15976 413 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-216ENST00000534389 FCER1GP30273 86 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 ASIPP42127 132 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 KIR2DS2P43631 304 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 EFNA4P52798 201 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 GFERP55789 205 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 HERVK_113P63121 156 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 SRSF9Q13242 221 aaKnown RBP eCLIP2.43□□□□□ -2.02
CSDE1-216ENST00000534389 RIGQ13278 110 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 LY6DQ14210 128 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 EBI3Q14213 229 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 MRPL23Q16540 153 aaKnown RBP2.43□□□□□ -2.02
CSDE1-216ENST00000534389 C4orf26Q17RF5 130 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 TBC1D28Q2M2D7 210 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 MRPL51Q4U2R6 128 aaKnown RBP2.43□□□□□ -2.02
CSDE1-216ENST00000534389 ZNF542PQ5EBM4 170 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 KLF17Q5JT82 389 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-216ENST00000534389 TEX36Q5VZQ5 186 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 Q5XG85 94 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 FAM104BQ5XKR9 115 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 SLC25A48Q6ZT89 311 aaKnown RBP2.43□□□□□ -2.02
CSDE1-216ENST00000534389 TRPT1Q86TN4 253 aaKnown RBP2.43□□□□□ -2.02
CSDE1-216ENST00000534389 LINC00596Q86U02 117 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 AMN1Q8IY45 258 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 ABCA7Q8IZY2 2146 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 LRRC75A-AS1Q8N1F1 130 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 POM121L12Q8N7R1 296 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 WDR31Q8NA23 367 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 PLEKHB2Q96CS7 222 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 RNF185Q96GF1 192 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 C17orf77Q96MU5 243 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 HIST1H4GQ99525 98 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 CITED2Q99967 270 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-216ENST00000534389 PAXXQ9BUH6 204 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 EDA2RQ9HAV5 297 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 PLEKHA3Q9HB20 300 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 ZNF71Q9NQZ8 489 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-216ENST00000534389 CALYQ9NYX4 217 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 USF3Q68DE3 2245 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 LTBP2Q14767 1821 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 IGLV2-18A0A075B6J9 118 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 TRAV8-2A0A0B4J237 113 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 TRAV40A0A0B4J280 105 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 IGHV3-64DA0A0J9YX35 117 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 A0A1B0GX51 115 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 C15orf61A6NNL5 157 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 OOSP1A8MZH6 123 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 J3QT63 122 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 NPFFO15130 113 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 MRPS12O15235 138 aaKnown RBP2.42□□□□□ -2.02
CSDE1-216ENST00000534389 FCGR3BO75015 233 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 SNCGO76070 127 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 DPM2O94777 84 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 NDUFA7O95182 113 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 IGKCP01834 107 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 IL4P05112 153 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 IGLC6P0CF74 106 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 ZNF883P0CG24 379 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 IGHV4-38-2P0DP08 117 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 B3GALT5-AS1P59052 145 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 HSPE1P61604 102 aaKnown RBP2.42□□□□□ -2.02
CSDE1-216ENST00000534389 RPS28P62857 69 aaKnown RBP2.42□□□□□ -2.02
CSDE1-216ENST00000534389 DEFB103AP81534 67 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 MZT1Q08AG7 82 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 OR1C1Q15619 314 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 RPL39P5Q59GN2 51 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 Q86TA4 180 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 THAP8Q8NA92 274 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 KIR2DL5BQ8NHK3 375 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 FAM57AQ8TBR7 257 aa2.42□□□□□ -2.02
CSDE1-216ENST00000534389 KLF14Q8TD94 323 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-216ENST00000534389 SRSF12Q8WXF0 261 aaKnown RBP2.42□□□□□ -2.02
CSDE1-216ENST00000534389 FLYWCH2Q96CP2 140 aaKnown RBP2.42□□□□□ -2.02
CSDE1-216ENST00000534389 C2orf48Q96LS8 159 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms