RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 SOX21Q9Y651 276 aaPredicted RBP0.96□□□□□ -2.26
FGFR1-235ENST00000530701 SOGA1O94964 1423 aa0.96□□□□□ -2.26
FGFR1-235ENST00000530701 UNC13CQ8NB66 2214 aa0.96□□□□□ -2.26
FGFR1-235ENST00000530701 EML5Q05BV3 1969 aa0.96□□□□□ -2.26
FGFR1-235ENST00000530701 SNRNP200O75643 2136 aaKnown RBP0.95□□□□□ -2.26
FGFR1-235ENST00000530701 COL4A5P29400 1685 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 IGKV2-40A0A087WW87 121 aaPredicted RBP0.95□□□□□ -2.26
FGFR1-235ENST00000530701 IGKV3D-7A0A0C4DH55 119 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 IGKV3OR2-268A0A0C4DH90 116 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 LOC107984156A0A0G2JMH3 177 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 A0A1B0GW64 132 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 BBIP1A8MTZ0 92 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 CCL16O15467 120 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 YPEL1O60688 119 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 MRPS14O60783 128 aaKnown RBP0.95□□□□□ -2.26
FGFR1-235ENST00000530701 IGKV2D-40P01614 121 aaPredicted RBP0.95□□□□□ -2.26
FGFR1-235ENST00000530701 IGLV1-51P01701 117 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 RBP4P02753 201 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 COX7CP15954 63 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 KDELR1P24390 212 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 DNAJB13P59910 316 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 HIST1H1AQ02539 215 aaPredicted RBP0.95□□□□□ -2.26
FGFR1-235ENST00000530701 DEFB115Q30KQ5 88 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 KRTAP5-11Q6L8G4 156 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 TMEM14EPQ6UXP3 125 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 Q6ZRN7 208 aaPredicted RBP0.95□□□□□ -2.26
FGFR1-235ENST00000530701 ARL17AQ8IVW1 177 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 OR10AG1Q8NH19 301 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 ZNF563Q8TA94 476 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 ZNF625Q96I27 306 aaPredicted RBP0.95□□□□□ -2.26
FGFR1-235ENST00000530701 VPS25Q9BRG1 176 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 NIT2Q9NQR4 276 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 CDC42SE1Q9NRR8 79 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 FKBP11Q9NYL4 201 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 CHCHD2Q9Y6H1 151 aaPredicted RBP0.95□□□□□ -2.26
FGFR1-235ENST00000530701 OVOS2A0A0J9YW53 1432 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 FAM135BQ49AJ0 1406 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 OVOS2Q6IE36 1432 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 ZGRF1Q86YA3 2104 aa0.95□□□□□ -2.26
FGFR1-235ENST00000530701 USP54Q70EL1 1684 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 SPEF2Q9C093 1822 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 CCDC171Q6TFL3 1326 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 DLG5Q8TDM6 1919 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 IGKV3-7A0A075B6H7 116 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 IGKV2-29A2NJV5 120 aaPredicted RBP0.94□□□□□ -2.26
FGFR1-235ENST00000530701 C9orf170A2RU37 121 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 EFCAB10A6NFE3 127 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 B4DSR2 109 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 C5orf67F2Z3F1 127 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 GEMIN2O14893 280 aaKnown RBP0.94□□□□□ -2.26
FGFR1-235ENST00000530701 EDF1O60869 148 aaKnown RBP0.94□□□□□ -2.26
FGFR1-235ENST00000530701 SULT1C4O75897 302 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 DNAL4O96015 105 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 SLC25A5P05141 298 aaKnown RBP0.94□□□□□ -2.26
FGFR1-235ENST00000530701 SLC25A4P12235 298 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 KRTAP10-1P60331 282 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 BLCAPP62952 87 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 MPV17LQ2QL34 196 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.94□□□□□ -2.26
FGFR1-235ENST00000530701 ZNF833PQ6ZTB9 187 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 C3orf62Q6ZUJ4 267 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 CTAGE3PQ8IX95 158 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 Q8N2B8 174 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 C10orf111Q8N326 155 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 OR8J3Q8NGG0 315 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 CCL4L1Q8NHW4 92 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 LINC00052Q96N35 136 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 CIB3Q96Q77 187 aaPredicted RBP0.94□□□□□ -2.26
FGFR1-235ENST00000530701 MRPL57Q9BQC6 102 aaKnown RBP0.94□□□□□ -2.26
FGFR1-235ENST00000530701 TAF9BQ9HBM6 251 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 TMEM14CQ9P0S9 112 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 DISP2A7MBM2 1401 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 KDM5CP41229 1560 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 FRMPD1Q5SYB0 1578 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 KIF13AQ9H1H9 1805 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 SPTBP11277 2137 aa0.94□□□□□ -2.26
FGFR1-235ENST00000530701 KIDINS220Q9ULH0 1771 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 ERCC6Q03468 1493 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 CITO14578 2027 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 IGLV3-32A0A0A0MS00 114 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 IGHV1-24A0A0C4DH33 117 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 TRBV6-4A0A1B0GX49 114 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 IFITM5A6NNB3 132 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 J3QKU1 62 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 TPST1O60507 370 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 RNASE3P12724 160 aaKnown RBP0.93□□□□□ -2.26
FGFR1-235ENST00000530701 HLA-DRB4P13762 266 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 AKR1D1P51857 326 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 COPZ1P61923 177 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 SNRPD3P62318 126 aaKnown RBP0.93□□□□□ -2.26
FGFR1-235ENST00000530701 CNBPP62633 177 aaKnown RBP0.93□□□□□ -2.26
FGFR1-235ENST00000530701 QRFPP83859 136 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 MIR22HGQ0VDD5 57 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 NEDD8Q15843 81 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 KRTAP13-4Q3LI77 160 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 Q5XG85 94 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 TMEM91Q6ZNR0 172 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 FOXI2Q6ZQN5 318 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 DEFB119Q8N690 84 aa0.93□□□□□ -2.26
FGFR1-235ENST00000530701 Q8TAT8 98 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms