RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 CACFD1Q9UGQ2 172 aa5.31□□□□□ -1.56
USP48-212ENST00000527823 C14orf166Q9Y224 244 aaKnown RBP5.31□□□□□ -1.56
USP48-212ENST00000527823 RCL1Q9Y2P8 373 aaKnown RBP5.31□□□□□ -1.56
USP48-212ENST00000527823 KLF12Q9Y4X4 402 aa5.31□□□□□ -1.56
USP48-212ENST00000527823 A0A0B4J2A0 478 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 PMS2P5A8MQ11 134 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 HPGDSO60760 199 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 PRAF2O60831 178 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 SNRPCP09234 159 aaKnown RBP5.3□□□□□ -1.56
USP48-212ENST00000527823 LINC00869P0C866 280 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 CT45A10P0DMU9 189 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 CXCL2P19875 107 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 SRIP30626 198 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 CCR6P51684 374 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 ATP5IP56385 69 aaPredicted RBP5.3□□□□□ -1.56
USP48-212ENST00000527823 AKR1C1Q04828 323 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 LCN15Q6UWW0 184 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 LYZL2Q7Z4W2 148 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 ZNF431Q8TF32 576 aaPredicted RBP5.3□□□□□ -1.56
USP48-212ENST00000527823 ODF3Q96PU9 254 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 MTFP1Q9UDX5 166 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 SHPKQ9UHJ6 478 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 PAIP2BQ9ULR5 123 aaKnown RBP5.3□□□□□ -1.56
USP48-212ENST00000527823 HIGD1AQ9Y241 93 aa5.3□□□□□ -1.56
USP48-212ENST00000527823 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.29□□□□□ -1.56
USP48-212ENST00000527823 ANKRD65E5RJM6 399 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 H3BTX0 84 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 RS1O15537 224 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 CCNKO75909 580 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 RAB3DO95716 219 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 ASIPP42127 132 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 TAS2R19P59542 299 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 LSM3P62310 102 aaKnown RBP5.29□□□□□ -1.56
USP48-212ENST00000527823 RAB11AP62491 216 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 ZNF415Q09FC8 603 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 BTN1A1Q13410 526 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 SURF2Q15527 256 aaPredicted RBP5.29□□□□□ -1.56
USP48-212ENST00000527823 CYP2G1PQ6ZSU1 146 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 NEXN-AS1Q8NBZ9 246 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 SLC50A1Q9BRV3 221 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 HHLA3Q9XRX5 114 aa5.29□□□□□ -1.56
USP48-212ENST00000527823 TRAV5A0A0B4J249 113 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 SMIM31A0A1B0GVY4 71 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 C7orf71A4D174 169 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 IBA57-AS1B1ANH7 110 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 KLLNB2CW77 178 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 E5RGE8 158 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 H3BP45 60 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 LECT2O14960 151 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 PITX3O75364 302 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 OR5G3P0C626 314 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 SFTA3P0C7M3 94 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 S100A7P31151 101 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 LEPP41159 167 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 PLP1P60201 277 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 LINC01556Q5JQF7 62 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 IBA57Q5T440 356 aaKnown RBP5.28□□□□□ -1.56
USP48-212ENST00000527823 PATE2Q6UY27 113 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 EIF4E3Q8N5X7 224 aaKnown RBP5.28□□□□□ -1.56
USP48-212ENST00000527823 TMEM229BQ8NBD8 167 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 CIRBP-AS1Q8TBR5 109 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 LRRC20Q8TCA0 184 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 CHAC1Q9BUX1 264 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 RAB26Q9ULW5 256 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 TP53TG3Q9ULZ0 132 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 GPR132Q9UNW8 380 aa5.28□□□□□ -1.56
USP48-212ENST00000527823 IGHV3-38A0A0C4DH36 116 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 LOC100131303A0A0U1RQF7 123 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 HYPMO75409 117 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 IL5P05113 134 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 IGLC2P0DOY2 106 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 AKR1C4P17516 323 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 AMTP48728 403 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 CD300CQ08708 224 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 PRR9Q5T870 116 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 Q6ZQT7 251 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 PCNPQ8WW12 178 aaKnown RBP5.27□□□□□ -1.57
USP48-212ENST00000527823 ZNF479Q96JC4 524 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 MRPL32Q9BYC8 188 aaKnown RBP5.27□□□□□ -1.57
USP48-212ENST00000527823 ARV1Q9H2C2 271 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 LPAP08519 4548 aa5.27□□□□□ -1.57
USP48-212ENST00000527823 SMCO3A2RU48 225 aa5.26□□□□□ -1.57
USP48-212ENST00000527823 IGLV2-8P01709 118 aa5.26□□□□□ -1.57
USP48-212ENST00000527823 SLC25A5P05141 298 aaKnown RBP5.26□□□□□ -1.57
USP48-212ENST00000527823 OR4E1P0C645 316 aa5.26□□□□□ -1.57
USP48-212ENST00000527823 RPL37AP61513 92 aaKnown RBP5.26□□□□□ -1.57
USP48-212ENST00000527823 NCS1P62166 190 aa5.26□□□□□ -1.57
USP48-212ENST00000527823 SLAQ13239 276 aa5.26□□□□□ -1.57
USP48-212ENST00000527823 BLNKQ8WV28 456 aa5.26□□□□□ -1.57
USP48-212ENST00000527823 YIPF6Q96EC8 236 aa5.26□□□□□ -1.57
USP48-212ENST00000527823 FAM19A4Q96LR4 140 aa5.26□□□□□ -1.57
USP48-212ENST00000527823 ARL6Q9H0F7 186 aa5.26□□□□□ -1.57
USP48-212ENST00000527823 VCX3BQ9H321 246 aa5.26□□□□□ -1.57
USP48-212ENST00000527823 EXTL2Q9UBQ6 330 aa5.26□□□□□ -1.57
USP48-212ENST00000527823 TRGV4A0A0C4DH28 118 aa5.25□□□□□ -1.57
USP48-212ENST00000527823 FAM25AB3EWG3 89 aa5.25□□□□□ -1.57
USP48-212ENST00000527823 FAM25CB3EWG5 89 aa5.25□□□□□ -1.57
USP48-212ENST00000527823 FAM25GB3EWG6 89 aa5.25□□□□□ -1.57
USP48-212ENST00000527823 H3BQ15 152 aa5.25□□□□□ -1.57
USP48-212ENST00000527823 M0R3E3 92 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms