RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 BUB3O43684 328 aa6.89□□□□□ -1.31
PKP3-202ENST00000524646 CD5LO43866 347 aa6.89□□□□□ -1.31
PKP3-202ENST00000524646 ORM1P02763 201 aa6.89□□□□□ -1.31
PKP3-202ENST00000524646 EFNA4P52798 201 aa6.89□□□□□ -1.31
PKP3-202ENST00000524646 VAMP3Q15836 100 aa6.89□□□□□ -1.31
PKP3-202ENST00000524646 IGFL4Q6B9Z1 124 aa6.89□□□□□ -1.31
PKP3-202ENST00000524646 OR4C5Q8NGB2 326 aa6.89□□□□□ -1.31
PKP3-202ENST00000524646 UBTD1Q9HAC8 227 aa6.89□□□□□ -1.31
PKP3-202ENST00000524646 HIF1ANQ9NWT6 349 aa6.89□□□□□ -1.31
PKP3-202ENST00000524646 ABCA2Q9BZC7 2435 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 IGHV3OR16-8A0A075B7F1 116 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 TRBV7-1A0A0A6YYK4 115 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 A0A1W2PPR1 153 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 SMAD7O15105 426 aaKnown RBP6.88□□□□□ -1.31
PKP3-202ENST00000524646 NPFFO15130 113 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 HSD52Q0P140 79 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 ERCC8Q13216 396 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 IL17RELQ6ZVW7 336 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 RNF182Q8N6D2 247 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 OR9G4Q8NGQ1 327 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 METTL26Q96S19 204 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 ATP6V0BQ99437 205 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 NXT2Q9NPJ8 142 aaKnown RBP6.88□□□□□ -1.31
PKP3-202ENST00000524646 MOB4Q9Y3A3 225 aa6.88□□□□□ -1.31
PKP3-202ENST00000524646 DMXL1Q9Y485 3027 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 MGAQ8IWI9 3026 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 TRAV8-2A0A0B4J237 113 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 IGHV3-35A0A0C4DH35 117 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 CENPVL3A0A0U1RRI6 287 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 NDUFS7O75251 213 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 SFTPCP11686 197 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 CRIP2P52943 208 aaPredicted RBP6.87□□□□□ -1.31
PKP3-202ENST00000524646 TMEM97Q5BJF2 176 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 C19orf54Q5BKX5 351 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 PSMG4Q5JS54 123 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 CLEC19AQ6UXS0 136 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 C8orf86Q6ZUL3 223 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 C9orf139Q6ZV77 190 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 BOD1L2Q8IYS8 172 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 C5orf56Q8N8D9 126 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 U3KQE9 123 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 ZFHX2Q9C0A1 2572 aaPredicted RBP6.87□□□□□ -1.31
PKP3-202ENST00000524646 SPTBN2O15020 2390 aa6.87□□□□□ -1.31
PKP3-202ENST00000524646 CBY3A6NI87 242 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 FAM223BA6NKX1 122 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 SIVA1O15304 175 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 TNFRSF6BO95407 300 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 CLEC3BP05452 202 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 FCER1GP30273 86 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 LMO4P61968 165 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 TMEM78Q5T7P6 136 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 PRSS57Q6UWY2 283 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 ZNF575Q86XF7 245 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 FAM223AQ8IWN6 122 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 OR4X2Q8NGF9 303 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 PIFOQ8TCI5 191 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 MSRB1Q9NZV6 116 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 PEF1Q9UBV8 284 aaKnown RBP6.86□□□□□ -1.31
PKP3-202ENST00000524646 PIEZO2Q9H5I5 2752 aa6.86□□□□□ -1.31
PKP3-202ENST00000524646 BSNQ9UPA5 3926 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 IGKV3D-20A0A0C4DH25 116 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 IGHV3-66A0A0C4DH42 116 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 A1L4Q6 167 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 A6NDN8 102 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 G3V318 75 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 ATP5G2Q06055 141 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 C9orf47Q6ZRZ4 202 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 ERASQ7Z444 233 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 Q8N8P6 123 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 RNASE8Q8TDE3 154 aaKnown RBP6.85□□□□□ -1.31
PKP3-202ENST00000524646 GLMPQ8WWB7 406 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 BPESC1Q9GZL8 116 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 AGPAT4-IT1Q9H0P7 198 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 C11orf21Q9P2W6 132 aa6.85□□□□□ -1.31
PKP3-202ENST00000524646 HIVEP3Q5T1R4 2406 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 IGHV4-4A0A075B6R2 117 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 TRAV41A0A0B4J266 112 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 IGHV7-4-1A0A0J9YVY3 117 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 C7orf71A4D174 169 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 SNAI2O43623 268 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 ATP5LO75964 103 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 TRGV3P03979 118 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 HLA-DRB4P13762 266 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 EVI2AP22794 236 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 LEPP41159 167 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 FXYD7P58549 80 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 FOXE3Q13461 319 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 ODF1Q14990 250 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 SMIM15Q7Z3B0 74 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 ITLN2Q8WWU7 325 aaPredicted RBP6.84□□□□□ -1.31
PKP3-202ENST00000524646 LENEPQ9Y5L5 61 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 HLA-DRB4X5D2U9 266 aa6.84□□□□□ -1.31
PKP3-202ENST00000524646 SPTA1P02549 2419 aa6.84□□□□□ -1.32
PKP3-202ENST00000524646 IGLV2-18A0A075B6J9 118 aa6.83□□□□□ -1.32
PKP3-202ENST00000524646 IGHV3-49A0A0A0MS15 119 aa6.83□□□□□ -1.32
PKP3-202ENST00000524646 TRAV8-6A0A0B4J262 113 aa6.83□□□□□ -1.32
PKP3-202ENST00000524646 PRSS47A8MTI9 375 aa6.83□□□□□ -1.32
PKP3-202ENST00000524646 H3BRM9 83 aa6.83□□□□□ -1.32
PKP3-202ENST00000524646 ZNF207O43670 478 aaKnown RBP6.83□□□□□ -1.32
PKP3-202ENST00000524646 GAS8-AS1O95177 125 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms