RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-215ENST00000524111 LY6G5BQ8NDX9 201 aa6.81□□□□□ -1.32
SREK1-215ENST00000524111 MRPL27Q9P0M9 148 aaKnown RBP6.81□□□□□ -1.32
SREK1-215ENST00000524111 VWC2LB2RUY7 222 aa6.81□□□□□ -1.32
SREK1-215ENST00000524111 PRAC2D3DTV9 90 aa6.81□□□□□ -1.32
SREK1-215ENST00000524111 LTAP01374 205 aa6.81□□□□□ -1.32
SREK1-215ENST00000524111 PAX8Q06710 450 aa6.81□□□□□ -1.32
SREK1-215ENST00000524111 TP73-AS1Q9UF72 201 aa6.81□□□□□ -1.32
SREK1-215ENST00000524111 CENPVL3A0A0U1RRI6 287 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 TM4SF20Q53R12 229 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 CBY3A6NI87 242 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 INS-IGF2F8WCM5 200 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 LY6LH3BQJ8 138 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 FCER1GP30273 86 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 NMUP48645 174 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 VAMP3Q15836 100 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 IL17RELQ6ZVW7 336 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 LINC00469Q8N7U9 141 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 MIEN1Q9BRT3 115 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 MSRB1Q9NZV6 116 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 UQCR10Q9UDW1 63 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 LMO4P61968 165 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 FAM231DQ6ZW35 169 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 DTX2Q86UW9 622 aa6.8□□□□□ -1.32
SREK1-215ENST00000524111 LOC102724200A0A096LPH7 203 aaPredicted RBP6.79□□□□□ -1.32
SREK1-215ENST00000524111 RPLP1P05386 114 aaKnown RBP6.79□□□□□ -1.32
SREK1-215ENST00000524111 COX6B1P14854 86 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 PAX1P15863 534 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 IFI27P40305 119 aaPredicted RBP6.79□□□□□ -1.32
SREK1-215ENST00000524111 LINC00310P59036 64 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 C11orf71Q6IPW1 123 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 MOB4Q9Y3A3 225 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 USP24Q9UPU5 2620 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 FABP5P3A8MUU1 101 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 AP1S3Q96PC3 154 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 F6UB75 175 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 H3BVH4 76 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 OVOL3O00110 214 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 SMAD7O15105 426 aaKnown RBP6.79□□□□□ -1.32
SREK1-215ENST00000524111 Q6ZVH6 145 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 SIRPDQ9H106 197 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 HSPB8Q9UJY1 196 aa6.79□□□□□ -1.32
SREK1-215ENST00000524111 IGHV1-69DA0A0B4J2H0 117 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 OOSP1A8MZH6 123 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 TRBV12-3P01733 135 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 IGHV1-69P01742 117 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 EBLN2Q6P2I7 272 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 ATP5L2Q7Z4Y8 100 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 NPBQ8NG41 125 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 OR10J6PQ8NGY7 276 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 OR10AG1Q8NH19 301 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 PRR25Q96S07 402 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 NDUFA3O95167 84 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 ORMDL3Q8N138 153 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 EGR2P11161 476 aaPredicted RBP6.78□□□□□ -1.32
SREK1-215ENST00000524111 RNASE4P34096 147 aaKnown RBP6.78□□□□□ -1.32
SREK1-215ENST00000524111 TTC9CQ8N5M4 171 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 FAM110DQ8TAY7 271 aaPredicted RBP6.78□□□□□ -1.32
SREK1-215ENST00000524111 TMEM14CQ9P0S9 112 aa6.78□□□□□ -1.32
SREK1-215ENST00000524111 ODF3BA8MYP8 253 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 RNF223E7ERA6 249 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 IGLC2P0DOY2 106 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 FAM74A4Q5TZK3 123 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 CELSR1Q9NYQ6 3014 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 SCGB2A2Q13296 93 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 HIST2H2BDQ6DRA6 164 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 SRSF8Q9BRL6 282 aaKnown RBP6.77□□□□□ -1.33
SREK1-215ENST00000524111 IGHV1-24A0A0C4DH33 117 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 NUDT3O95989 172 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 GATA1P15976 413 aaPredicted RBP6.77□□□□□ -1.33
SREK1-215ENST00000524111 PLP1P60201 277 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 OR4X2Q8NGF9 303 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 KLF12Q9Y4X4 402 aa6.77□□□□□ -1.33
SREK1-215ENST00000524111 FLNAP21333 2647 aaKnown RBP6.77□□□□□ -1.33
SREK1-215ENST00000524111 TRAV26-2A0A0B4J265 109 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 MSMBP08118 114 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 ZNF688P0C7X2 276 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 CACNG7P62955 275 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 COL5A1-AS1Q5SY13 56 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 PRSS57Q6UWY2 283 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 MBD6Q96DN6 1003 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 LAMTOR2Q9Y2Q5 125 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 PHLDA3Q9Y5J5 127 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 TCF21O43680 179 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 MLST8Q9BVC4 326 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 ZNF492Q9P255 531 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 TRAV9-2A0A087WT02 112 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 C7orf71A4D174 169 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 MYCNOSP40205 109 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 ZNF80P51504 273 aaPredicted RBP6.76□□□□□ -1.33
SREK1-215ENST00000524111 FOXE3Q13461 319 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 HELZ2Q9BYK8 2649 aaKnown RBP6.76□□□□□ -1.33
SREK1-215ENST00000524111 IGHV4-59P01825 116 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 SMIM17P0DL12 118 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 WIPF2Q8TF74 440 aaPredicted RBP6.76□□□□□ -1.33
SREK1-215ENST00000524111 NPFFR1Q9GZQ6 430 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 MAP1LC3AQ9H492 121 aa6.76□□□□□ -1.33
SREK1-215ENST00000524111 BEX4Q9NWD9 120 aaPredicted RBP6.76□□□□□ -1.33
SREK1-215ENST00000524111 SYS1-DBNDD2H3BUS1 97 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms