RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 NBPF19A0A087WUL8 3843 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 RFPL4AA6NLU0 287 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 RFPL4AL1F8VTS6 287 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 OR1I1O60431 355 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 OR2J2O76002 312 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 MSMBP08118 114 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 OR4E1P0C645 316 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 SRP14P37108 136 aaKnown RBP1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 ZNF80P51504 273 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 HIST1H3AP68431 136 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 BTG2P78543 158 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 H3F3AP84243 136 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 POU6F1Q14863 301 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 C3orf56Q8N813 242 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 PXT1Q8NFP0 134 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 NEK7Q8TDX7 302 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 TSLPQ969D9 159 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 PRTFDC1Q9NRG1 225 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 PRELID3BQ9Y3B1 194 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 MED12Q93074 2177 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 ANKRD36A6QL64 1941 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 PDZD2O15018 2839 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 MGAM2Q2M2H8 2515 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 NINQ8N4C6 2090 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 SCN3AQ9NY46 2000 aa1.73□□□□□ -2.13
HMGB1P1-201ENST00000522557 BOD1L1Q8NFC6 3051 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 OTOGQ6ZRI0 2925 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 A0A087X0T9 212 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 A0A1B0GVG6 124 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 ZNF860A6NHJ4 632 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 PGLYRP1O75594 196 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 CRYGSP22914 178 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 RPL22P35268 128 aaKnown RBP1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 EMP1P54849 157 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 RPL19P84098 196 aaKnown RBP1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 MYL5Q02045 173 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 CCSMST1Q4G0I0 132 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 SMIM15Q7Z3B0 74 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 MORN4Q8NDC4 146 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 TEX47Q8TBZ9 253 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 ACOT12Q8WYK0 555 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 BTF3L4Q96K17 158 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 CMSS1Q9BQ75 279 aaKnown RBP1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 DOHHQ9BU89 302 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 RNASE7Q9H1E1 156 aaKnown RBP1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 NAT8Q9UHE5 227 aa1.72□□□□□ -2.13
HMGB1P1-201ENST00000522557 CHD3Q12873 2000 aaKnown RBP1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 NF1P21359 2839 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 TRAV38-1A0A0B4J264 116 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 FABP5P3A8MUU1 101 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 APOC4-APOC2K7ER74 178 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 CREBL2O60519 120 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 NOS1APO75052 506 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 APOC2P02655 101 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 CRHP06850 196 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 MPC1LP0DKB6 136 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 SULT1A3P0DMM9 295 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 SULT1A4P0DMN0 295 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 RPS3P23396 243 aaKnown RBP eCLIP1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 ARPC4P59998 168 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 HIST1H4AP62805 103 aaKnown RBP1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 ERHP84090 104 aaKnown RBP1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 KRR1Q13601 381 aaKnown RBP1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 LIN52Q52LA3 116 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 AADACL3Q5VUY0 350 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 TRIQKQ629K1 86 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 CRYBG3Q68DQ2 2970 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 ZNF705AQ6ZN79 300 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 TMED4Q7Z7H5 227 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 OR10X1Q8NGY0 326 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 BORCS7Q96B45 105 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 TOMM6Q96B49 74 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 SIGMAR1Q99720 223 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 PRRT1Q99946 306 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 AIF1LQ9BQI0 150 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 C11orf68Q9H3H3 251 aaKnown RBP1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 PARVBQ9HBI1 364 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 FAIMQ9NVQ4 179 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 FAM32AQ9Y421 112 aaKnown RBP1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 TIMM9Q9Y5J7 89 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 TMEM56-RWDD3S4R434 201 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 RELNP78509 3460 aa1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 MAP1AP78559 2803 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P1-201ENST00000522557 hCG_1818297A0A087WSY0 165 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 A0A0G2JMM0 328 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 TRBV10-2A0A0K0K1G8 114 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 A0A1W2PPB8 328 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 A0A1W2PRS3 328 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 KIR3DP1A8MWS1 328 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 DEFB108AA8MXU0 73 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 IBA57-AS1B1ANH7 110 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 J3QQQ9 107 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 OVOL1O14753 267 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 ZNF682O95780 498 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 C8GP07360 202 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 FXYD2P54710 66 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 SUPT4H1P63272 117 aaKnown RBP1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 HBA1P69905 142 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 C12orf74Q32Q52 190 aa1.7□□□□□ -2.14
HMGB1P1-201ENST00000522557 C6orf52Q5T4I8 152 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms