RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 GBF1Q92538 1859 aa2.41□□□□□ -2.02
SKP1-208ENST00000521216 ERCC6L2Q5T890 1561 aa2.4□□□□□ -2.02
SKP1-208ENST00000521216 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.4□□□□□ -2.02
SKP1-208ENST00000521216 ZFC3H1O60293 1989 aaKnown RBP2.4□□□□□ -2.02
SKP1-208ENST00000521216 TRAV1-2A0A0B4J238 106 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 TRAV8-4A0A0B4J246 113 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 TEX50A0A1B0GTY4 177 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 RIIAD1A6NNX1 92 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 ZNF727A8MUV8 499 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 EEF1E1-BLOC1S5C9J1V9 151 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 SYS1-DBNDD2H3BUS1 97 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 SNCGO76070 127 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 P01737 135 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 IGHV1-46P01743 117 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 SRP19P09132 144 aaKnown RBP2.4□□□□□ -2.03
SKP1-208ENST00000521216 OR5AL1P0C617 328 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 BCL2P10415 239 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 PSMB8P28062 276 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 CCR2P41597 374 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 MARCKSL1P49006 195 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 PLGLB1Q02325 96 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 RRN3P1Q2M238 152 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 MPV17LQ2QL34 196 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 LINC00303Q3SY05 128 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 IBA57Q5T440 356 aaKnown RBP2.4□□□□□ -2.03
SKP1-208ENST00000521216 ZCCHC24Q8N2G6 241 aaKnown RBP2.4□□□□□ -2.03
SKP1-208ENST00000521216 OR4X2Q8NGF9 303 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 OR2T10Q8NGZ9 312 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 MRPL30Q8TCC3 161 aaKnown RBP2.4□□□□□ -2.03
SKP1-208ENST00000521216 PPP1R1CQ8WVI7 109 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 CLDN23Q96B33 292 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 LINC00526Q96FQ7 95 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 MCEEQ96PE7 176 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 RNASE7Q9H1E1 156 aaKnown RBP2.4□□□□□ -2.03
SKP1-208ENST00000521216 NAA60Q9H7X0 242 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 BCL2L10Q9HD36 194 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 PXMP4Q9Y6I8 212 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 ADAMTS7Q9UKP4 1686 aa2.4□□□□□ -2.03
SKP1-208ENST00000521216 COL5A1P20908 1838 aaPredicted RBP2.4□□□□□ -2.03
SKP1-208ENST00000521216 TMEM131Q92545 1883 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 DEPDC5O75140 1603 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 CHD3Q12873 2000 aaKnown RBP2.39□□□□□ -2.03
SKP1-208ENST00000521216 RGPD4Q7Z3J3 1758 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 TRAV1-1A0A0B4J248 108 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 MUC21A0A0G2JKD1 596 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 MUC21A0A140T8X8 626 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 C3orf85A0A1B0GTC6 90 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 APOMO95445 188 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 MT-ND6P03923 174 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 MT-ATP8P03928 68 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 SLC25A5P05141 298 aaKnown RBP2.39□□□□□ -2.03
SKP1-208ENST00000521216 CRYGAP11844 174 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 HRES1P13985 223 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 CRYGSP22914 178 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 PSMB3P49720 205 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 PSMB2P49721 201 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 RBM11P57052 281 aaKnown RBP2.39□□□□□ -2.03
SKP1-208ENST00000521216 ZNF90Q03938 601 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 SLC38A11Q08AI6 406 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 PMAIP1Q13794 54 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 DIAPH2-AS1Q14236 149 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 Q499Y3 187 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 FAM27D1Q5T7N8 215 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 Q5XG85 94 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 TMEM14EPQ6UXP3 125 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 SLC25A45Q8N413 288 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 C3orf22Q8N5N4 141 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 OTOSQ8NHW6 89 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 CT55Q8WUE5 264 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 PPDPFLQ8WWR9 84 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 COPS9Q8WXC6 57 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 MRPL20Q9BYC9 149 aaKnown RBP2.39□□□□□ -2.03
SKP1-208ENST00000521216 CST11Q9H112 138 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 SND1-IT1Q9HBX3 110 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 MANBALQ9NQG1 85 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 KLF12Q9Y4X4 402 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 CHCHD2Q9Y6H1 151 aaPredicted RBP2.39□□□□□ -2.03
SKP1-208ENST00000521216 TSC2P49815 1807 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 KIAA1671Q9BY89 1806 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 A0A0G2JMZ2 1700 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 LRRC37A2A6NM11 1700 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 LRRC37AA6NMS7 1700 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 DOT1LQ8TEK3 1739 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 WDR90Q96KV7 1748 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 CITO14578 2027 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 LRP6O75581 1613 aa2.39□□□□□ -2.03
SKP1-208ENST00000521216 SCN7AQ01118 1682 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 LOC107984640A0A0U1RRK4 108 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 FAM236DA0A1B0GTK5 79 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 C4orf51C9J302 202 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 H3BUT2 72 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 J3QQQ9 107 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 J3QT63 122 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 M0R1B8 84 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 ZNF737O75373 536 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 CECR9P0C854 216 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 INAFM2P0DMQ5 153 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 FAM236CP0DP71 79 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 KRTDAPP60985 99 aa2.38□□□□□ -2.03
SKP1-208ENST00000521216 HERVK_113P63121 156 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms