RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 PRSS57Q6UWY2 283 aa12.85□□□□□ -0.35
PCDHGA11-202ENST00000518882 Q8N6K4 173 aa12.85□□□□□ -0.35
PCDHGA11-202ENST00000518882 DKK2Q9UBU2 259 aa12.85□□□□□ -0.35
PCDHGA11-202ENST00000518882 SMAD7O15105 426 aaKnown RBP12.85□□□□□ -0.35
PCDHGA11-202ENST00000518882 ERCC8Q13216 396 aa12.85□□□□□ -0.35
PCDHGA11-202ENST00000518882 PCP2Q8IVA1 136 aa12.85□□□□□ -0.35
PCDHGA11-202ENST00000518882 ZFHX3Q15911 3703 aa12.84□□□□□ -0.35
PCDHGA11-202ENST00000518882 GAGE12BA1L429 117 aa12.84□□□□□ -0.35
PCDHGA11-202ENST00000518882 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
PCDHGA11-202ENST00000518882 ORM1P02763 201 aa12.84□□□□□ -0.35
PCDHGA11-202ENST00000518882 BMI1P35226 326 aa12.84□□□□□ -0.35
PCDHGA11-202ENST00000518882 VMO1Q7Z5L0 202 aa12.84□□□□□ -0.35
PCDHGA11-202ENST00000518882 C18orf15Q96N68 181 aa12.84□□□□□ -0.35
PCDHGA11-202ENST00000518882 MUC6Q6W4X9 2439 aa12.84□□□□□ -0.35
PCDHGA11-202ENST00000518882 PTPRZ1P23471 2315 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA11-202ENST00000518882 ADAMTSL5Q6ZMM2 481 aa12.83□□□□□ -0.35
PCDHGA11-202ENST00000518882 ARL6IP6Q8N6S5 226 aa12.83□□□□□ -0.35
PCDHGA11-202ENST00000518882 JMJD8Q96S16 334 aa12.83□□□□□ -0.35
PCDHGA11-202ENST00000518882 IGHV7-81A0A0B4J1V7 117 aa12.83□□□□□ -0.36
PCDHGA11-202ENST00000518882 SELENOKQ9Y6D0 94 aa12.83□□□□□ -0.36
PCDHGA11-202ENST00000518882 PPBPP02775 128 aa12.82□□□□□ -0.36
PCDHGA11-202ENST00000518882 RNF182Q8N6D2 247 aa12.82□□□□□ -0.36
PCDHGA11-202ENST00000518882 TIMD4Q96H15 378 aa12.82□□□□□ -0.36
PCDHGA11-202ENST00000518882 NAA38Q9BRA0 125 aaKnown RBP12.82□□□□□ -0.36
PCDHGA11-202ENST00000518882 A1L4Q6 167 aa12.82□□□□□ -0.36
PCDHGA11-202ENST00000518882 PPIFP30405 207 aaKnown RBP12.82□□□□□ -0.36
PCDHGA11-202ENST00000518882 NMUP48645 174 aa12.82□□□□□ -0.36
PCDHGA11-202ENST00000518882 CNFNQ9BYD5 112 aa12.82□□□□□ -0.36
PCDHGA11-202ENST00000518882 FBLL1A6NHQ2 334 aaKnown RBP12.81□□□□□ -0.36
PCDHGA11-202ENST00000518882 EVI2AP22794 236 aa12.81□□□□□ -0.36
PCDHGA11-202ENST00000518882 GATA1P15976 413 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA11-202ENST00000518882 TMEM11P17152 192 aa12.81□□□□□ -0.36
PCDHGA11-202ENST00000518882 KIR3DS1Q14943 382 aa12.81□□□□□ -0.36
PCDHGA11-202ENST00000518882 FBXL19-AS1Q494R0 122 aa12.81□□□□□ -0.36
PCDHGA11-202ENST00000518882 OR9G4Q8NGQ1 327 aa12.81□□□□□ -0.36
PCDHGA11-202ENST00000518882 C9orf118A6NHY6 69 aa12.8□□□□□ -0.36
PCDHGA11-202ENST00000518882 FABP5P3A8MUU1 101 aa12.8□□□□□ -0.36
PCDHGA11-202ENST00000518882 H3BRM9 83 aa12.8□□□□□ -0.36
PCDHGA11-202ENST00000518882 SRSF2Q01130 221 aaKnown RBP12.8□□□□□ -0.36
PCDHGA11-202ENST00000518882 HSD52Q0P140 79 aa12.8□□□□□ -0.36
PCDHGA11-202ENST00000518882 EBI3Q14213 229 aa12.8□□□□□ -0.36
PCDHGA11-202ENST00000518882 CCDC144NLQ6NUI1 221 aa12.8□□□□□ -0.36
PCDHGA11-202ENST00000518882 UFSP1Q6NVU6 142 aa12.8□□□□□ -0.36
PCDHGA11-202ENST00000518882 IL17RELQ6ZVW7 336 aa12.8□□□□□ -0.36
PCDHGA11-202ENST00000518882 MAP1LC3AQ9H492 121 aa12.8□□□□□ -0.36
PCDHGA11-202ENST00000518882 IGHV3-66A0A0C4DH42 116 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 GAGE10A6NGK3 116 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 ZFP36P26651 326 aaKnown RBP12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 LEPP41159 167 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 Q8N9W7 124 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 NPFFR1Q9GZQ6 430 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 MSRB2Q9Y3D2 182 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 A6NDN8 102 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 LINC01546A6NGU7 62 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 H3BUT2 72 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 K7ENP7 123 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 SIVA1O15304 175 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 TNFRSF6BO95407 300 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 C15orf32Q32M92 178 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 C11orf71Q6IPW1 123 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 ZFAND3Q9H8U3 227 aa12.79□□□□□ -0.36
PCDHGA11-202ENST00000518882 IGKV2D-26A0A0A0MRZ7 120 aa12.78□□□□□ -0.36
PCDHGA11-202ENST00000518882 VPS25Q9BRG1 176 aa12.78□□□□□ -0.36
PCDHGA11-202ENST00000518882 BUB3O43684 328 aa12.78□□□□□ -0.36
PCDHGA11-202ENST00000518882 ODF1Q14990 250 aa12.78□□□□□ -0.36
PCDHGA11-202ENST00000518882 LINC01559Q495D7 138 aa12.78□□□□□ -0.36
PCDHGA11-202ENST00000518882 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.78□□□□□ -0.36
PCDHGA11-202ENST00000518882 ZNF502Q8TBZ5 544 aa12.78□□□□□ -0.36
PCDHGA11-202ENST00000518882 RAB37Q96AX2 223 aa12.78□□□□□ -0.36
PCDHGA11-202ENST00000518882 TTTY13Q9BZ97 58 aa12.78□□□□□ -0.36
PCDHGA11-202ENST00000518882 C11orf21Q9P2W6 132 aa12.78□□□□□ -0.36
PCDHGA11-202ENST00000518882 CCL21O00585 134 aa12.77□□□□□ -0.36
PCDHGA11-202ENST00000518882 CLEC3BP05452 202 aa12.77□□□□□ -0.36
PCDHGA11-202ENST00000518882 OR4X2Q8NGF9 303 aa12.77□□□□□ -0.36
PCDHGA11-202ENST00000518882 IGHV3OR16-13A0A075B7E8 117 aa12.77□□□□□ -0.37
PCDHGA11-202ENST00000518882 IGHV3-74A0A0B4J1X5 117 aa12.77□□□□□ -0.37
PCDHGA11-202ENST00000518882 IGKV3D-20A0A0C4DH25 116 aa12.77□□□□□ -0.37
PCDHGA11-202ENST00000518882 SCGB2A1O75556 95 aa12.77□□□□□ -0.37
PCDHGA11-202ENST00000518882 FCER1GP30273 86 aa12.77□□□□□ -0.37
PCDHGA11-202ENST00000518882 ECSCRQ19T08 205 aa12.77□□□□□ -0.37
PCDHGA11-202ENST00000518882 TM4SF20Q53R12 229 aa12.77□□□□□ -0.37
PCDHGA11-202ENST00000518882 HHLA3Q9XRX5 114 aa12.77□□□□□ -0.37
PCDHGA11-202ENST00000518882 ATRXP46100 2492 aa12.76□□□□□ -0.37
PCDHGA11-202ENST00000518882 A0A0G2JLM5 398 aa12.76□□□□□ -0.37
PCDHGA11-202ENST00000518882 CLPSL1A2RUU4 121 aa12.76□□□□□ -0.37
PCDHGA11-202ENST00000518882 TRGV3P03979 118 aa12.76□□□□□ -0.37
PCDHGA11-202ENST00000518882 FOXC1Q12948 553 aa12.76□□□□□ -0.37
PCDHGA11-202ENST00000518882 DTX2Q86UW9 622 aa12.76□□□□□ -0.37
PCDHGA11-202ENST00000518882 ZMAT4Q9H898 229 aa12.76□□□□□ -0.37
PCDHGA11-202ENST00000518882 SAP30O75446 220 aa12.76□□□□□ -0.37
PCDHGA11-202ENST00000518882 C1orf122Q6ZSJ8 110 aa12.76□□□□□ -0.37
PCDHGA11-202ENST00000518882 AP1S3Q96PC3 154 aa12.76□□□□□ -0.37
PCDHGA11-202ENST00000518882 OOSP1A8MZH6 123 aa12.75□□□□□ -0.37
PCDHGA11-202ENST00000518882 ADORA2A-AS1P86434 159 aa12.75□□□□□ -0.37
PCDHGA11-202ENST00000518882 MINOS1Q5TGZ0 78 aa12.75□□□□□ -0.37
PCDHGA11-202ENST00000518882 Q6ZQT7 251 aa12.75□□□□□ -0.37
PCDHGA11-202ENST00000518882 NXT2Q9NPJ8 142 aaKnown RBP12.75□□□□□ -0.37
PCDHGA11-202ENST00000518882 MINOS1-NBL1R4GNA1 71 aa12.75□□□□□ -0.37
PCDHGA11-202ENST00000518882 IGHV3-49A0A0A0MS15 119 aa12.74□□□□□ -0.37
PCDHGA11-202ENST00000518882 ATP6V0E1O15342 81 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms