RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 LOC102724200A0A096LPH7 203 aaPredicted RBP4.55□□□□□ -1.68
CLDND1-225ENST00000512147 TRAV8-2A0A0B4J237 113 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 OR4C46A6NHA9 309 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 SLC17A3O00476 420 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 OR7C2O60412 319 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 NDUFB4O95168 129 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 OR10J4P0C629 311 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 NBEAP1P0C6P0 100 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 ARL14EPLP0DKL9 152 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 HLA-DMBP28068 263 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 MEOX2P50222 304 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 RAB5CP51148 216 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 GUK1Q16774 197 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 ODF3L2Q3SX64 289 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 KHDC3LQ587J8 217 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 IGFL4Q6B9Z1 124 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 TEX261Q6UWH6 196 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 LCN15Q6UWW0 184 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 DPPA3Q6W0C5 159 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 PQLC2Q6ZP29 291 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 SUN5Q8TC36 379 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 BLNKQ8WV28 456 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 MBD3L1Q8WWY6 194 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 C16orf92Q96LL3 132 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 C20orf173Q96LM9 149 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 TMPRSS5Q9H3S3 457 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 PGPEP1Q9NXJ5 209 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 UBQLN2Q9UHD9 624 aa4.55□□□□□ -1.68
CLDND1-225ENST00000512147 MAP1LC3B2A6NCE7 125 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 ISLRO14498 428 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 ZNF253O75346 499 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 CXorf1O96002 111 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 H2AFB1P0C5Y9 115 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 ZNF688P0C7X2 276 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 GCHFRP30047 84 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 PSMB3P49720 205 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 FGF8P55075 233 aaPredicted RBP4.54□□□□□ -1.68
CLDND1-225ENST00000512147 DEFB131AP59861 70 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 UBE2L3P68036 154 aaKnown RBP4.54□□□□□ -1.68
CLDND1-225ENST00000512147 CCL20P78556 96 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 PDE6HQ13956 83 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 ZNF124Q15973 351 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 DEFB135Q30KP9 77 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 SAMD13Q5VXD3 122 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 APRG1Q8IVJ8 170 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 RNF182Q8N6D2 247 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 ZNF680Q8NEM1 530 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 LRRC20Q8TCA0 184 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 SFT2D1Q8WV19 159 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 MAP1LC3BQ9GZQ8 125 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 WFDC10AQ9H1F0 79 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 MAP6D1Q9H9H5 199 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 ZNF331Q9NQX6 463 aaPredicted RBP4.54□□□□□ -1.68
CLDND1-225ENST00000512147 PKHD1L1Q86WI1 4243 aa4.54□□□□□ -1.68
CLDND1-225ENST00000512147 LRP1Q07954 4544 aaKnown RBP4.53□□□□□ -1.68
CLDND1-225ENST00000512147 TRAV1-1A0A0B4J248 108 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 A0A1B0GV50 99 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 ZNF705FA8MVS1 300 aaPredicted RBP4.53□□□□□ -1.68
CLDND1-225ENST00000512147 ZNF705EA8MWA4 302 aaPredicted RBP4.53□□□□□ -1.68
CLDND1-225ENST00000512147 ID1P41134 155 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 CMC4P56277 68 aaPredicted RBP4.53□□□□□ -1.68
CLDND1-225ENST00000512147 DEFB1P60022 68 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 SNRPD3P62318 126 aaKnown RBP4.53□□□□□ -1.68
CLDND1-225ENST00000512147 RANP62826 216 aaKnown RBP4.53□□□□□ -1.68
CLDND1-225ENST00000512147 PSG9Q00887 426 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 IFITM2Q01629 132 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 PSG3Q16557 428 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 PSMG4Q5JS54 123 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 IQCF2Q8IXL9 164 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 EXOC3-AS1Q8N2X6 119 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 LINC00052Q96N35 136 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 SLC50A1Q9BRV3 221 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 NDUFAF3Q9BU61 184 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 TMEM167BQ9NRX6 74 aa4.53□□□□□ -1.68
CLDND1-225ENST00000512147 TRAV10A0A0B4J240 114 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 A0A1W2PRE2 83 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 PGPA6NDG6 321 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 KNCNA6PVL3 124 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 PRAC2D3DTV9 90 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 F6UB75 175 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 M0R3E3 92 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 IFNA7P01567 189 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 BLOC1S1P78537 153 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 GDF5OSQ5U4N7 250 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 LYPD6BQ8NI32 183 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 Q9H3A6 140 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 OTORQ9NRC9 128 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 CLEC5AQ9NY25 188 aa4.52□□□□□ -1.69
CLDND1-225ENST00000512147 YTHDF2Q9Y5A9 579 aaKnown RBP4.52□□□□□ -1.69
CLDND1-225ENST00000512147 A0A0J9YX75 114 aa4.51□□□□□ -1.69
CLDND1-225ENST00000512147 FAM74A7A6NL05 159 aa4.51□□□□□ -1.69
CLDND1-225ENST00000512147 H3BMM0 161 aa4.51□□□□□ -1.69
CLDND1-225ENST00000512147 UBE2CO00762 179 aa4.51□□□□□ -1.69
CLDND1-225ENST00000512147 PAGE4O60829 102 aa4.51□□□□□ -1.69
CLDND1-225ENST00000512147 HBE1P02100 147 aa4.51□□□□□ -1.69
CLDND1-225ENST00000512147 ZNF705DP0CH99 300 aaPredicted RBP4.51□□□□□ -1.69
CLDND1-225ENST00000512147 ZNF705BP0CI00 300 aaPredicted RBP4.51□□□□□ -1.69
CLDND1-225ENST00000512147 APOC4P55056 127 aa4.51□□□□□ -1.69
CLDND1-225ENST00000512147 UBE2G2P60604 165 aa4.51□□□□□ -1.69
CLDND1-225ENST00000512147 SUMO1P63165 101 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms