RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 C11orf1Q9H5F2 150 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 SMKR1H3BMG3 65 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 RPL35AP18077 110 aaKnown RBP11.07□□□□□ -0.64
TCOF1-207ENST00000504761 HIST3H2BBQ8N257 126 aa11.07□□□□□ -0.64
TCOF1-207ENST00000504761 ZNF324O75467 553 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-207ENST00000504761 AMBPP02760 352 aa11.06□□□□□ -0.64
TCOF1-207ENST00000504761 RPLP1P05386 114 aaKnown RBP11.06□□□□□ -0.64
TCOF1-207ENST00000504761 OR1N2Q8NGR9 330 aa11.06□□□□□ -0.64
TCOF1-207ENST00000504761 VPREB3Q9UKI3 123 aa11.06□□□□□ -0.64
TCOF1-207ENST00000504761 TCTEX1D4Q5JR98 221 aa11.06□□□□□ -0.64
TCOF1-207ENST00000504761 AMN1Q8IY45 258 aa11.06□□□□□ -0.64
TCOF1-207ENST00000504761 ZNF843Q8N446 348 aa11.06□□□□□ -0.64
TCOF1-207ENST00000504761 LINC00477Q96M19 166 aa11.06□□□□□ -0.64
TCOF1-207ENST00000504761 VGLL1Q99990 258 aa11.06□□□□□ -0.64
TCOF1-207ENST00000504761 LEPP41159 167 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 IGLV11-55A0A075B6I3 123 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 LINC01548A6NM66 108 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 LINC00574Q9H8X3 128 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 LAMA1P25391 3075 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 F6UB75 175 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 UBE2CO00762 179 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 CTSGP08311 255 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 SCGB1C2P0DMR2 95 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 SPINK13Q1W4C9 94 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 C10orf91Q5T1B1 145 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 C14orf178Q8N769 122 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-207ENST00000504761 FOXC2Q99958 501 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 F2Z2F3 143 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 RIPPLY3P57055 190 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 TMEM75Q8N9X5 138 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 SCGB3A1Q96QR1 104 aa11.05□□□□□ -0.64
TCOF1-207ENST00000504761 TMEM213A2RRL7 107 aa11.04□□□□□ -0.64
TCOF1-207ENST00000504761 OR10J3Q5JRS4 329 aa11.04□□□□□ -0.64
TCOF1-207ENST00000504761 ATP5L2Q7Z4Y8 100 aa11.04□□□□□ -0.64
TCOF1-207ENST00000504761 TRAV8-6A0A0B4J262 113 aa11.04□□□□□ -0.64
TCOF1-207ENST00000504761 NDUFA4O00483 81 aa11.04□□□□□ -0.64
TCOF1-207ENST00000504761 UBE2L6O14933 153 aa11.04□□□□□ -0.64
TCOF1-207ENST00000504761 C5orf56Q8N8D9 126 aa11.04□□□□□ -0.64
TCOF1-207ENST00000504761 LY6G5BQ8NDX9 201 aa11.03□□□□□ -0.64
TCOF1-207ENST00000504761 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
TCOF1-207ENST00000504761 PRR25Q96S07 402 aa11.03□□□□□ -0.64
TCOF1-207ENST00000504761 C11orf71Q6IPW1 123 aa11.03□□□□□ -0.64
TCOF1-207ENST00000504761 TRAV12-2A0A075B6T6 113 aa11.03□□□□□ -0.64
TCOF1-207ENST00000504761 TMEM170BQ5T4T1 132 aa11.03□□□□□ -0.64
TCOF1-207ENST00000504761 SLC25A34Q6PIV7 304 aa11.03□□□□□ -0.64
TCOF1-207ENST00000504761 UQCR10Q9UDW1 63 aa11.03□□□□□ -0.64
TCOF1-207ENST00000504761 V9GYV3 84 aa11.03□□□□□ -0.64
TCOF1-207ENST00000504761 ZNF292O60281 2723 aa11.02□□□□□ -0.64
TCOF1-207ENST00000504761 K7EN84 100 aa11.02□□□□□ -0.64
TCOF1-207ENST00000504761 TMEM14CQ9P0S9 112 aa11.02□□□□□ -0.64
TCOF1-207ENST00000504761 H7C1H1 209 aa11.02□□□□□ -0.65
TCOF1-207ENST00000504761 EIF4EBP1Q13541 118 aaPredicted RBP11.02□□□□□ -0.65
TCOF1-207ENST00000504761 C11orf52Q96A22 123 aa11.02□□□□□ -0.65
TCOF1-207ENST00000504761 GSN-AS1Q9NRJ2 163 aa11.02□□□□□ -0.65
TCOF1-207ENST00000504761 COL6A3P12111 3177 aa11.02□□□□□ -0.65
TCOF1-207ENST00000504761 A0A087WWL8 130 aa11.02□□□□□ -0.65
TCOF1-207ENST00000504761 ZC2HC1AQ96GY0 325 aa11.02□□□□□ -0.65
TCOF1-207ENST00000504761 XCL2Q9UBD3 114 aa11.02□□□□□ -0.65
TCOF1-207ENST00000504761 A0A1W2PPR1 153 aa11.01□□□□□ -0.65
TCOF1-207ENST00000504761 OR11H12B2RN74 326 aa11.01□□□□□ -0.65
TCOF1-207ENST00000504761 LINC01619G3V211 115 aa11.01□□□□□ -0.65
TCOF1-207ENST00000504761 MCRIP2Q9BUT9 160 aaKnown RBP11.01□□□□□ -0.65
TCOF1-207ENST00000504761 DMRT1Q9Y5R6 373 aa11.01□□□□□ -0.65
TCOF1-207ENST00000504761 TMEM262E9PQX1 116 aa11.01□□□□□ -0.65
TCOF1-207ENST00000504761 C1orf194Q5T5A4 169 aa11.01□□□□□ -0.65
TCOF1-207ENST00000504761 PRDM13Q9H4Q3 707 aa11.01□□□□□ -0.65
TCOF1-207ENST00000504761 IGHV3-53P01767 116 aa11.01□□□□□ -0.65
TCOF1-207ENST00000504761 PRSS2P07478 247 aa11.01□□□□□ -0.65
TCOF1-207ENST00000504761 FANCD2OSQ96PS1 177 aa11.01□□□□□ -0.65
TCOF1-207ENST00000504761 DNAH14Q0VDD8 3507 aa11.01□□□□□ -0.65
TCOF1-207ENST00000504761 CPAMD8Q8IZJ3 1885 aa11□□□□□ -0.65
TCOF1-207ENST00000504761 NDUFA3O95167 84 aa11□□□□□ -0.65
TCOF1-207ENST00000504761 CTAG1AP78358 180 aa11□□□□□ -0.65
TCOF1-207ENST00000504761 AJUBAQ96IF1 538 aa11□□□□□ -0.65
TCOF1-207ENST00000504761 FAM167A-AS1Q96KT0 104 aa11□□□□□ -0.65
TCOF1-207ENST00000504761 ST20Q9HBF5 79 aa11□□□□□ -0.65
TCOF1-207ENST00000504761 KLK9Q9UKQ9 250 aa11□□□□□ -0.65
TCOF1-207ENST00000504761 GCSHP23434 173 aa11□□□□□ -0.65
TCOF1-207ENST00000504761 ZMAT5Q9UDW3 170 aaKnown RBP11□□□□□ -0.65
TCOF1-207ENST00000504761 SPRY2O43597 315 aa11□□□□□ -0.65
TCOF1-207ENST00000504761 PPBPP02775 128 aa11□□□□□ -0.65
TCOF1-207ENST00000504761 KNCNA6PVL3 124 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 RNF151Q2KHN1 245 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 GTSCR1Q86UQ5 136 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 RCHY1Q96PM5 261 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 IGHV7-4-1A0A0J9YVY3 117 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 PPP1R17O96001 155 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 ELANEP08246 267 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 HOXD3P31249 432 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-207ENST00000504761 WFDC11Q8NEX6 87 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 HBDP02042 147 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 CACNG7P62955 275 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 PYY3Q5JQD4 70 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 OR4C5Q8NGB2 326 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-207ENST00000504761 GP9P14770 177 aa10.99□□□□□ -0.65
TCOF1-207ENST00000504761 GEMIN7Q9H840 131 aaKnown RBP10.99□□□□□ -0.65
TCOF1-207ENST00000504761 C19orf54Q5BKX5 351 aa10.98□□□□□ -0.65
TCOF1-207ENST00000504761 TRGV11A0A075B6L2 103 aa10.98□□□□□ -0.65
TCOF1-207ENST00000504761 TRGV1A0A0A0MS02 117 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms