RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 IGHV1OR15-1A0A075B7D0 117 aa13.18□□□□□ -0.3
PCDHA1-203ENST00000504120 TPSG1Q9NRR2 321 aa13.18□□□□□ -0.3
PCDHA1-203ENST00000504120 I3L3M4 83 aa13.18□□□□□ -0.3
PCDHA1-203ENST00000504120 C11orf52Q96A22 123 aa13.18□□□□□ -0.3
PCDHA1-203ENST00000504120 MMP23AO75900 390 aa13.18□□□□□ -0.3
PCDHA1-203ENST00000504120 ZFAND6Q6FIF0 208 aa13.18□□□□□ -0.3
PCDHA1-203ENST00000504120 Q8NFD4 153 aa13.18□□□□□ -0.3
PCDHA1-203ENST00000504120 XCL2Q9UBD3 114 aa13.18□□□□□ -0.3
PCDHA1-203ENST00000504120 FER1L5A0AVI2 2057 aa13.18□□□□□ -0.3
PCDHA1-203ENST00000504120 CACNA1GO43497 2377 aa13.17□□□□□ -0.3
PCDHA1-203ENST00000504120 POLEQ07864 2286 aa13.17□□□□□ -0.3
PCDHA1-203ENST00000504120 IGLC1P0CG04 106 aa13.17□□□□□ -0.3
PCDHA1-203ENST00000504120 MRPL51Q4U2R6 128 aaKnown RBP13.17□□□□□ -0.3
PCDHA1-203ENST00000504120 C8orf31Q8N9H6 132 aa13.17□□□□□ -0.3
PCDHA1-203ENST00000504120 KNCNA6PVL3 124 aa13.16□□□□□ -0.3
PCDHA1-203ENST00000504120 K7EM74 188 aa13.16□□□□□ -0.3
PCDHA1-203ENST00000504120 PMVKQ15126 192 aa13.16□□□□□ -0.3
PCDHA1-203ENST00000504120 A0A1B0GUS0 222 aa13.16□□□□□ -0.3
PCDHA1-203ENST00000504120 DEFB121Q5J5C9 76 aa13.16□□□□□ -0.3
PCDHA1-203ENST00000504120 DNAJC30Q96LL9 226 aa13.16□□□□□ -0.3
PCDHA1-203ENST00000504120 HELZP42694 1942 aaKnown RBP13.15□□□□□ -0.3
PCDHA1-203ENST00000504120 WIPF3A6NGB9 483 aa13.15□□□□□ -0.3
PCDHA1-203ENST00000504120 CDKN1BP46527 198 aa13.15□□□□□ -0.3
PCDHA1-203ENST00000504120 FXYD5Q96DB9 178 aa13.15□□□□□ -0.3
PCDHA1-203ENST00000504120 KLK9Q9UKQ9 250 aa13.15□□□□□ -0.3
PCDHA1-203ENST00000504120 COL6A6A6NMZ7 2263 aa13.15□□□□□ -0.3
PCDHA1-203ENST00000504120 SSBP2P81877 361 aaPredicted RBP13.15□□□□□ -0.3
PCDHA1-203ENST00000504120 SLAQ13239 276 aa13.15□□□□□ -0.3
PCDHA1-203ENST00000504120 IL15RAQ13261 267 aa13.15□□□□□ -0.3
PCDHA1-203ENST00000504120 PIP4P1Q86T03 277 aa13.15□□□□□ -0.3
PCDHA1-203ENST00000504120 TRAV8-3A0A0A6YYJ7 113 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 NDUFS6O75380 124 aaKnown RBP13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 ANXA2RQ3ZCQ2 193 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 COX11Q9Y6N1 276 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 PRR20EP86478 221 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 PRR20CP86479 221 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 PRR20DP86480 221 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 PRR20BP86481 221 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 PRR20AP86496 221 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 SDHAF1A6NFY7 115 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 TCTEX1D4Q5JR98 221 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 TRBV25-1A0A075B6N4 114 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 GAGE12JA6NER3 117 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 GAGE1Q13065 139 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 GAGE4Q13068 117 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 GAGE5Q13069 117 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 DIAPH2-AS1Q14236 149 aa13.14□□□□□ -0.31
PCDHA1-203ENST00000504120 PRSS57Q6UWY2 283 aa13.13□□□□□ -0.31
PCDHA1-203ENST00000504120 Q96MF0 132 aa13.13□□□□□ -0.31
PCDHA1-203ENST00000504120 GAGE12BA1L429 117 aa13.13□□□□□ -0.31
PCDHA1-203ENST00000504120 ZNF114Q8NC26 417 aa13.13□□□□□ -0.31
PCDHA1-203ENST00000504120 C1orf122Q6ZSJ8 110 aa13.13□□□□□ -0.31
PCDHA1-203ENST00000504120 PSCAO43653 123 aa13.13□□□□□ -0.31
PCDHA1-203ENST00000504120 MAPK1IP1LQ8NDC0 245 aa13.13□□□□□ -0.31
PCDHA1-203ENST00000504120 CR1LQ2VPA4 569 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 EREGO14944 169 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 AZU1P20160 251 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 ZC2HC1AQ96GY0 325 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 PKDREJQ9NTG1 2253 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 KIAA1671Q9BY89 1806 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 LGALS9BQ3B8N2 356 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 LGALS9CQ6DKI2 356 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 IGHV1-24A0A0C4DH33 117 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 H3BUA1 57 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 HIST1H4AP62805 103 aaKnown RBP13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 OCIAD2Q56VL3 154 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 F8WEM9 126 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 C3orf56Q8N813 242 aa13.12□□□□□ -0.31
PCDHA1-203ENST00000504120 DOPEY2Q9Y3R5 2298 aa13.11□□□□□ -0.31
PCDHA1-203ENST00000504120 SPAG8Q99932 426 aaPredicted RBP13.11□□□□□ -0.31
PCDHA1-203ENST00000504120 KLF12Q9Y4X4 402 aa13.11□□□□□ -0.31
PCDHA1-203ENST00000504120 IGHV7-4-1A0A0J9YVY3 117 aa13.11□□□□□ -0.31
PCDHA1-203ENST00000504120 C9JAW5 83 aa13.11□□□□□ -0.31
PCDHA1-203ENST00000504120 ELANEP08246 267 aa13.11□□□□□ -0.31
PCDHA1-203ENST00000504120 SRSF2Q01130 221 aaKnown RBP13.11□□□□□ -0.31
PCDHA1-203ENST00000504120 Q6ZWC4 215 aa13.11□□□□□ -0.31
PCDHA1-203ENST00000504120 INS-IGF2F8WCM5 200 aa13.1□□□□□ -0.31
PCDHA1-203ENST00000504120 ZNF491Q8N8L2 437 aa13.1□□□□□ -0.31
PCDHA1-203ENST00000504120 IGLC2P0DOY2 106 aa13.1□□□□□ -0.31
PCDHA1-203ENST00000504120 IGLC3P0DOY3 106 aa13.1□□□□□ -0.31
PCDHA1-203ENST00000504120 DAD1P61803 113 aa13.1□□□□□ -0.31
PCDHA1-203ENST00000504120 SIGLEC8Q9NYZ4 499 aa13.1□□□□□ -0.31
PCDHA1-203ENST00000504120 IGHV3-16A0A0C4DH30 117 aa13.1□□□□□ -0.31
PCDHA1-203ENST00000504120 ADAMTSL5Q6ZMM2 481 aa13.1□□□□□ -0.31
PCDHA1-203ENST00000504120 C11orf53Q8IXP5 236 aa13.1□□□□□ -0.31
PCDHA1-203ENST00000504120 RNF138Q8WVD3 245 aa13.1□□□□□ -0.31
PCDHA1-203ENST00000504120 PYGO2Q9BRQ0 406 aa13.1□□□□□ -0.31
PCDHA1-203ENST00000504120 IGHV2-5P01817 119 aa13.09□□□□□ -0.31
PCDHA1-203ENST00000504120 LTBP2Q14767 1821 aa13.09□□□□□ -0.31
PCDHA1-203ENST00000504120 TRAV26-2A0A0B4J265 109 aa13.09□□□□□ -0.31
PCDHA1-203ENST00000504120 LTAP01374 205 aa13.09□□□□□ -0.31
PCDHA1-203ENST00000504120 SMIM2Q9BVW6 85 aa13.09□□□□□ -0.31
PCDHA1-203ENST00000504120 NBL1P41271 181 aa13.09□□□□□ -0.31
PCDHA1-203ENST00000504120 VWC2Q2TAL6 325 aa13.09□□□□□ -0.31
PCDHA1-203ENST00000504120 DIDO1Q9BTC0 2240 aaKnown RBP13.09□□□□□ -0.31
PCDHA1-203ENST00000504120 ZNF407Q9C0G0 2248 aa13.09□□□□□ -0.31
PCDHA1-203ENST00000504120 TRAV12-2A0A075B6T6 113 aa13.08□□□□□ -0.31
PCDHA1-203ENST00000504120 SHISA9B4DS77 424 aa13.08□□□□□ -0.31
PCDHA1-203ENST00000504120 TRBV20-1A0A075B6N2 111 aa13.08□□□□□ -0.32
PCDHA1-203ENST00000504120 IGLC7A0M8Q6 106 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms